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M747DRAFT_274070-T1, M747DRAFT_274070-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_274070-T1
Unique NameM747DRAFT_274070-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851903.1:245793..248616+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_274070-T1 ID=M747DRAFT_274070-T1|Name=M747DRAFT_274070-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2824bp|location=Sequence derived from alignment at KZ851903.1:245793..248616+ (Aspergillus niger ATCC 13496)
ATGTCCGCCACCGCGGAGGTCCTGGTGATTTCCTCCTCGCCGGAGCGCAA
CCCAGTTCACACGCCAGCGCCGCCTGCGTATGATCCCGAAAGACTCTTTG
GATTGTCCCCAGTAGACGTTGAAACGACTCCGCTGCCGTCTCCGTCGGAC
TTGTTTTGTCCTCCGACGCATTCTAGGTTTTTCGAGGTTGGGAATCAGGT
CGACGAATTGCGCCGAGATGAAACCCGCAAGAAGTCTAGTACCTTGACGA
ATGATGATTCCGCTGTTACAACGCTAGAGGGAGAACCGGCGACAGATAAA
CCGAAGCGAAGGGGTAGGCCAAAGAAGGAGCAGAAAAGAGCTACGGAGGA
GCTGGGGCCCTGTGTTACGGGCAACGAGAAGACTACTACGAAAAAGACTA
TCACAGGAACTAGTAAGAAACGCGCTCAACCTGCGACAAAGCGCTCGAAG
CAGGCGAATAAGACTATTTCTGGGAGGGTTGCGAAGGCGGGCACTCCGCA
AGTCAAGGAGGCGGGCGAGAAGGCTATTTGTCCGTCGACACCAACGACTG
CTCTGCCCCTGAAGGCTACGAATGATGTGCTGGAATGGGAAAGGGATGGC
TTACAGCTTGAGCAAGCGATGACGCGGAGATTGGACTGGACACCTACAGT
CAATAAGGTTAAGGAAGTCGTTGAGTTGGAAGGGAAGTCAGGGTCAGATG
ATAATACAAGGGGTTTTGGTAACCTGCTGTCGGAGTATGGGTTTAATGGA
GCTGCTGCTCCTGTAAACGACTTTATGGCCTCTGTCGAAGGTGGACCGAC
GAAGCGAAGGCGGATAGAGCTGGTTGATCCCGGAGTATATCCTGCTCCCA
GACAAAGTGTCGCCGACGATAGTGAGAAGGATAACACAGAGGGAACCCGC
AAATCAACACCAGCTGCGCGAAAGAAGCCGACGAAGCGTGCCAACAAATT
TACCACTCTCACTGCCCGCGTGACAGCGAAGTATATCAACGAGTCTACGG
AGGGTTCAGATGTCGTAGACGAAGAGACACCGAAAGCGAAGCCTAAAGTT
TCAAGATCCAAGAAAAAGGGCCAGGCAAGCAAGTCTTACGAACCCGAGTT
CGTGGTGCTTTCTCCCGAAGAAGCTGCTAAGTCCCTCGATGATCAAGAGC
TGGTATTTGGCACATGCAGCCAGCTGGAGCGGGAAGACTCACCCACTACT
ATAAGAGAGCTGCAGGCAGCTATTAGCGAGTCGGAACGAAGCATGACGTT
GGAAGCCAGCGGTCGTCCGCATCGAACGCAAAGCAAGGGCTCATCCTCTA
CAGTCTCACGCTTCAATGGCTCAGGAAACTTGTGGTCGGTCGCATCTCGG
GATGTTGACGGTTCACTAATGCAGGTAGAAGTGGTGGATCTGGTGAATTC
GCCTGATAGATCTGGGACTATCACTCTGGATGAGCGACCTAGCAACGCCA
AGAGAGTAGCTGAAGCCGAATGCAATACCAGCGACATCAACCCTACCCAG
AAAGGTAGCGACCAGGCAAAAGCTGCTTCGACAAGCGAAACACAGCCTGT
TGTACCTTCAACCACTCAGTCAAAGAACAAAAAGGCCGAGAATACCACAT
CCATTGCCCGCAAGCCCGACCCTAAGATGCCGCAATACGACAACTTCACA
GATGCCCAGCTATCGAAACAAGCCGCCTCATTCGGCTTCAAACCGCTCAA
AAACCGGAAGAAGATGATTGAGCTGCTTGAAAAGTGCTGGAAAGCAAAGA
ACAGCATATCATCAGAGGCAAACAACGAGAATACAGATCAGGAAACGCCT
GCTGAACCCGAATCAGCACCTGAGCCTGGTAATAAGCCAAAGGGGAAAGG
AACAACACGGAAAACCACCACGAAGGCGAAAGCCAAAACTCAACCTAGTA
CATCATCAAAGTCAACAACCGAAGCCATCTCAACAACAAAATCTCCAAGC
AATCCCAACTCTAACACCACAACCTCAACCTCAACCTCAATTTCCAAACC
TACCCCTTCCTACGCCAACGTCGAGGAAATCGAAGACTCCGAAGAAGACT
CCGACCCCATCTCCTTCCCCTCTCCCAGCCGCCTCCTACCCCAGACCCTC
CAAACAAATCACAAACACGCCCACACCCTCCCTACATCCAACTTACCATC
AAGTCCTAATCGAACCACATCCACATCCGTTCCCAAAGAACCAGAACCCC
CCGCCATACTTCTCCCCCTAACTGAGCAAATCACCAAAGCCGTGCGTGCC
CAATCCGCAGCCCACCCTGCATCATCCAACAGCAATAAGACTCACACAAG
GAAACAAACATGGCACGAGAAAATTCTCATGTACGACCCTATTCCTTTGG
AGGAGTTCACCACTTGGTTAAACACAGAGGGACTGGGTCTCGTGAATGAG
GATCGGGAGGTCGGGGCGGGGTTCGTGAGGAGGTGGTGTGAGAGTAAGGG
GGTGGTTTGTTGTTATAGGCCGAGGAAGAAGGAGTGATGCGTTCTCAGTT
GAATATAGATTATTTGGATTTGGAGTGGGTATTGGGGCTGAGTATTTTTT
GGGAGATTACGTTATTTTATTACTGTATTGATTTTTGGGAAGGGGTGGGT
TCATAAGTTTGAGGTGGTTATTGGAGTCATGGATGCATGTATAGTTAGTA
GGAGCCTTGGATTTTAGGTTAGGGTTTGGGTTGATATGGCTTGGTGTAGT
TGGTTTGATTGGTTCAGAGGATGGGAATACTACTACTACTACTACTACTA
CTACTACTACTACTACTACTACTACTACTACTACTACTACTAGTGTAGTA
GAAGAAATTTTTCGGGTTTTATAG
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Coding sequence (CDS) from alignment at KZ851903.1:245793..248616+

>M747DRAFT_274070-T1 ID=M747DRAFT_274070-T1|Name=M747DRAFT_274070-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=5136bp|location=Sequence derived from alignment at KZ851903.1:245793..248616+ (Aspergillus niger ATCC 13496)
ATGTCCGCCACCGCGGAGGTCCTGGTGATTTCCTCCTCGCCGGAGCGCAA
CCCAGTTCACACGCCAGCGCCGCCTGCGTATGATCCCGAAAGACTCTTTG
GATTGTCCCCAGTAGACGTTGAAACGACTCCGCTGCCGTCTCCGTCGGAC
TTGTTTTGTCCTCCGACGCATTCTAGGTTTTTCGAGGTTGGGAATCAGGT
CGACGAATTGCGCCGAGATGAAACCCGCAAGAAGTCTAGTACCTTGACGA
ATGATGATTCCGCTGTTACAACGCTAGAGGGAGAACCGGCGACAGATAAA
CCGAAGCGAAGGGGTAGGCCAAAGAAGGAGCAGAAAAGAGCTACGGAGGA
GCTGGGGCCCTGTGTTACGGGCAACGAGAAGACTACTACGAAAAAGACTA
TCACAGGAACTAGTAAGAAACGCGCTCAACCTGCGACAAAGCGCTCGAAG
CAGGCGAATAAGACTATTTCTGGGAGGGTTGCGAAGGCGGGCACTCCGCA
AGTCAAGGAGGCGGGCGAGAAGGCTATTTGTCCGTCGACACCAACGACTG
CTCTGCCCCTGAAGGCTACGAATGATGTGCTGGAATGGGAAAGGGATGGC
TTACAGCTTGAGCAAGCGATGACGCGGAGATTGGACTGGACACCTACAGT
CAATAAGGTTAAGGAAGTCGTTGAGTTGGAAGGGAAGTCAGGGTCAGATG
ATAATACAAGGGGTTTTGGTAACCTGCTGTCGGAGTATGGGTTTAATGGA
GCTGCTGCTCCTGTAAACGACTTTATGGCCTCTGTCGAAGGTGGACCGAC
GAAGCGAAGGCGGATAGAGCTGGTTGATCCCGGAGTATATCCTGCTCCCA
GACAAAGTGTCGCCGACGATAGTGAGAAGGATAACACAGAGGGAACCCGC
AAATCAACACCAGCTGCGCGAAAGAAGCCGACGAAGCGTGCCAACAAATT
TACCACTCTCACTGCCCGCGTGACAGCGAAGTATATCAACGAGTCTACGG
AGGGTTCAGATGTCGTAGACGAAGAGACACCGAAAGCGAAGCCTAAAGTT
TCAAGATCCAAGAAAAAGGGCCAGGCAAGCAAGTCTTACGAACCCGAGTT
CGTGGTGCTTTCTCCCGAAGAAGCTGCTAAGTCCCTCGATGATCAAGAGC
TGGTATTTGGCACATGCAGCCAGCTGGAGCGGGAAGACTCACCCACTACT
ATAAGAGAGCTGCAGGCAGCTATTAGCGAGTCGGAACGAAGCATGACGTT
GGAAGCCAGCGGTCGTCCGCATCGAACGCAAAGCAAGGGCTCATCCTCTA
CAGTCTCACGCTTCAATGGCTCAGGAAACTTGTGGTCGGTCGCATCTCGG
GATGTTGACGGTTCACTAATGCAGGTAGAAGTGGTGGATCTGGTGAATTC
GCCTGATAGATCTGGGACTATCACTCTGGATGAGCGACCTAGCAACGCCA
AGAGAGTAGCTGAAGCCGAATGCAATACCAGCGACATCAACCCTACCCAG
AAAGGTAGCGACCAGGCAAAAGCTGCTTCGACAAGCGAAACACAGCCTGT
TGTACCTTCAACCACTCAGTCAAAGAACAAAAAGGCCGAGAATACCACAT
CCATTGCCCGCAAGCCCGACCCTAAGATGCCGCAATACGACAACTTCACA
GATGCCCAGCTATCGAAACAAGCCGCCTCATTCGGCTTCAAACCGCTCAA
AAACCGGAAGAAGATGATTGAGCTGCTTGAAAAGTGCTGGAAAGCAAAGA
ACAGCATATCATCAGAGGCAAACAACGAGAATACAGATCAGGAAACGCCT
GCTGAACCCGAATCAGCACCTGAGCCTGGTAATAAGCCAAAGGGGAAAGG
AACAACACGGAAAACCACCACGAAGGCGAAAGCCAAAACTCAACCTAGTA
CATCATCAAAGTCAACAACCGAAGCCATCTCAACAACAAAATCTCCAAGC
AATCCCAACTCTAACACCACAACCTCAACCTCAACCTCAATTTCCAAACC
TACCCCTTCCTACGCCAACGTCGAGGAAATCGAAGACTCCGAAGAAGACT
CCGACCCCATCTCCTTCCCCTCTCCCAGCCGCCTCCTACCCCAGACCCTC
CAAACAAATCACAAACACGCCCACACCCTCCCTACATCCAACTTACCATC
AAGTCCTAATCGAACCACATCCACATCCGTTCCCAAAGAACCAGAACCCC
CCGCCATACTTCTCCCCCTAACTGAGCAAATCACCAAAGCCGTGCGTGCC
CAATCCGCAGCCCACCCTGCATCATCCAACAGCAATAAGACTCACACAAG
GAAACAAACATGGCACGAGAAAATTCTCATGTACGACCCTATTCCTTTGG
AGGAGTTCACCACTTGGTTAAACACAGAGGGACTGGGTCTCGTGAATGAG
GATCGGGAGGTCGGGGCGGGGTTCGTGAGGAGGTGGTGTGAGATTGGTTT
GATTGGTTCAGAGGATGGGAATACTACTACTACTACTACTACTACTACTA
CTACTACTACTACTACTACTACTACTACTACTACTAGTGTAGTAGAAGAA
ATTTTTCGGGTTTTATAGATGTCCGCCACCGCGGAGGTCCTGGTGATTTC
CTCCTCGCCGGAGCGCAACCCAGTTCACACGCCAGCGCCGCCTGCGTATG
ATCCCGAAAGACTCTTTGGATTGTCCCCAGTAGACGTTGAAACGACTCCG
CTGCCGTCTCCGTCGGACTTGTTTTGTCCTCCGACGCATTCTAGGTTTTT
CGAGGTTGGGAATCAGGTCGACGAATTGCGCCGAGATGAAACCCGCAAGA
AGTCTAGTACCTTGACGAATGATGATTCCGCTGTTACAACGCTAGAGGGA
GAACCGGCGACAGATAAACCGAAGCGAAGGGGTAGGCCAAAGAAGGAGCA
GAAAAGAGCTACGGAGGAGCTGGGGCCCTGTGTTACGGGCAACGAGAAGA
CTACTACGAAAAAGACTATCACAGGAACTAGTAAGAAACGCGCTCAACCT
GCGACAAAGCGCTCGAAGCAGGCGAATAAGACTATTTCTGGGAGGGTTGC
GAAGGCGGGCACTCCGCAAGTCAAGGAGGCGGGCGAGAAGGCTATTTGTC
CGTCGACACCAACGACTGCTCTGCCCCTGAAGGCTACGAATGATGTGCTG
GAATGGGAAAGGGATGGCTTACAGCTTGAGCAAGCGATGACGCGGAGATT
GGACTGGACACCTACAGTCAATAAGGTTAAGGAAGTCGTTGAGTTGGAAG
GGAAGTCAGGGTCAGATGATAATACAAGGGGTTTTGGTAACCTGCTGTCG
GAGTATGGGTTTAATGGAGCTGCTGCTCCTGTAAACGACTTTATGGCCTC
TGTCGAAGGTGGACCGACGAAGCGAAGGCGGATAGAGCTGGTTGATCCCG
GAGTATATCCTGCTCCCAGACAAAGTGTCGCCGACGATAGTGAGAAGGAT
AACACAGAGGGAACCCGCAAATCAACACCAGCTGCGCGAAAGAAGCCGAC
GAAGCGTGCCAACAAATTTACCACTCTCACTGCCCGCGTGACAGCGAAGT
ATATCAACGAGTCTACGGAGGGTTCAGATGTCGTAGACGAAGAGACACCG
AAAGCGAAGCCTAAAGTTTCAAGATCCAAGAAAAAGGGCCAGGCAAGCAA
GTCTTACGAACCCGAGTTCGTGGTGCTTTCTCCCGAAGAAGCTGCTAAGT
CCCTCGATGATCAAGAGCTGGTATTTGGCACATGCAGCCAGCTGGAGCGG
GAAGACTCACCCACTACTATAAGAGAGCTGCAGGCAGCTATTAGCGAGTC
GGAACGAAGCATGACGTTGGAAGCCAGCGGTCGTCCGCATCGAACGCAAA
GCAAGGGCTCATCCTCTACAGTCTCACGCTTCAATGGCTCAGGAAACTTG
TGGTCGGTCGCATCTCGGGATGTTGACGGTTCACTAATGCAGGTAGAAGT
GGTGGATCTGGTGAATTCGCCTGATAGATCTGGGACTATCACTCTGGATG
AGCGACCTAGCAACGCCAAGAGAGTAGCTGAAGCCGAATGCAATACCAGC
GACATCAACCCTACCCAGAAAGGTAGCGACCAGGCAAAAGCTGCTTCGAC
AAGCGAAACACAGCCTGTTGTACCTTCAACCACTCAGTCAAAGAACAAAA
AGGCCGAGAATACCACATCCATTGCCCGCAAGCCCGACCCTAAGATGCCG
CAATACGACAACTTCACAGATGCCCAGCTATCGAAACAAGCCGCCTCATT
CGGCTTCAAACCGCTCAAAAACCGGAAGAAGATGATTGAGCTGCTTGAAA
AGTGCTGGAAAGCAAAGAACAGCATATCATCAGAGGCAAACAACGAGAAT
ACAGATCAGGAAACGCCTGCTGAACCCGAATCAGCACCTGAGCCTGGTAA
TAAGCCAAAGGGGAAAGGAACAACACGGAAAACCACCACGAAGGCGAAAG
CCAAAACTCAACCTAGTACATCATCAAAGTCAACAACCGAAGCCATCTCA
ACAACAAAATCTCCAAGCAATCCCAACTCTAACACCACAACCTCAACCTC
AACCTCAATTTCCAAACCTACCCCTTCCTACGCCAACGTCGAGGAAATCG
AAGACTCCGAAGAAGACTCCGACCCCATCTCCTTCCCCTCTCCCAGCCGC
CTCCTACCCCAGACCCTCCAAACAAATCACAAACACGCCCACACCCTCCC
TACATCCAACTTACCATCAAGTCCTAATCGAACCACATCCACATCCGTTC
CCAAAGAACCAGAACCCCCCGCCATACTTCTCCCCCTAACTGAGCAAATC
ACCAAAGCCGTGCGTGCCCAATCCGCAGCCCACCCTGCATCATCCAACAG
CAATAAGACTCACACAAGGAAACAAACATGGCACGAGAAAATTCTCATGT
ACGACCCTATTCCTTTGGAGGAGTTCACCACTTGGTTAAACACAGAGGGA
CTGGGTCTCGTGAATGAGGATCGGGAGGTCGGGGCGGGGTTCGTGAGGAG
GTGGTGTGAGATTGGTTTGATTGGTTCAGAGGATGGGAATACTACTACTA
CTACTACTACTACTACTACTACTACTACTACTACTACTACTACTACTACT
ACTAGTGTAGTAGAAGAAATTTTTCGGGTTTTATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0033557Slx1-Slx4 complex
Vocabulary: Molecular Function
TermDefinition
GO:00171085'-flap endonuclease activity
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
GO:0006281DNA repair
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SLX4M747DRAFT_274070Aspergillus niger ATCC 13496gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_274070-T1.exon1M747DRAFT_274070-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_274070-T1.exon2M747DRAFT_274070-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_274070-T1.cdsM747DRAFT_274070-T1.cdsAspergillus niger ATCC 13496CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_274070-T1M747DRAFT_274070-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR027784
DBxrefInterPro:IPR018574
DBxrefPFAM:PF09494
Product5'-flap endonuclease
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851903.1supercontigKZ851903.1:245793..248616 +
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