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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851904.1:558016..560682+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_274910-T1 ID=M747DRAFT_274910-T1|Name=M747DRAFT_274910-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2667bp|location=Sequence derived from alignment at KZ851904.1:558016..560682+ (Aspergillus niger ATCC 13496)
GCGGAAAGCAGTAGAGAACGAAAAGTCTCTTTGGGTAGCACCGAATACAA
GGAATCACTAGAGTTACAGCCCGTCATCCTAACTGCCACTCACTGGAACG
CGTCCATTGAGACTCTTGTCCACTGTAGATATACTTTTGTTTCTATCAGC
CATCTTCTGCCCACGGCCAAAGTGGGCGCCGCCATCCTGTCTTTCCTTCC
GGGCACCCGTTTTCTTTTCCTTTCTTCGTCTCTCCGCTTTCATCGCTCCG
CAGCTGGTCCTGCTTCATCCTTTGCTGCTGCTACTACTACCTTCTTCCCC
TCCTCGCTTGCTGCTGCTGCTGCTGCTCCTCCTTCTCCGTCCCCGCCCCT
CTTCTTCCTCTCCCGCCGCTGCTACTCAAGCAAGAAGAAGAAAGCATCCA
AAGCCAAAATGCCCCCCAAGAAGGCCGTCGTTCAAGAAAAGGTCCTACTG
GGCCGTCCAGGAAACAACCTGAAGAGTGGTATCGTATGTGAGCATTGACC
CCACCATACACTATGTTTTTTTTCTGCCCCTCCCAGCCTCCTTCCTCCCT
TTTCGTCTATTTTTTTTCCCTTTTGTTTTTCTCTCCCTCGCTTGTCTCCC
TCCCCTATAAATATCTTCCTTTCCCCTTTTCTTTTTCCTTTTTTCTCTTC
TCCTCTCTACACATTCCGCAGACACAATGTAATTGCTCAAGAAGAGATTT
TAATAATGTTTCTTCTCTTCTCTCCAGGTTGGTCTCGCCAACGTCGGCAA
GTCCACGCTCTTCCAGGCCATTACCAAGTCGTCCCTTGGTAACCCTGCCA
ACTTCCCCTATGCTACCATTGACCCCGAAGAGGCGCGTGTCATTGTCCCC
GATGACCGCTTCGACTGGCTTTGCGAGCACTACAAGCCCAAGTCTCAGGT
TCCCGCCAACTTGACCGTCTATGATATCGCCGGTCTGACCCGTGGTGCCT
CCACCGGTGCCGGTCTCGGTAACGCTTTCTTGTCGCACATCCGTGCCGTC
GATGCTATCTTCCAGGTCGTTCGTTGCTTCGATGATGCTGAGATTATCCA
CGTCGAGGGTGACGTCGACCCCATCCGTGATCTGACCATCATCAGCGAGG
AGCTGCGTATCAAGGATATCGAGTTCGTCGAGAAGGCTCTCGAGAACCTT
CAGAAGCAGACCAAGCGTGGTGGTCAGACTCTGGAGATGAAGAAGCTGCG
TGAGGAAGAGGCCACTGTTGCCAAGGTGCTCGAGTGGCTCAAGGACGGCA
AGGACGTCCGCAAGAACGAATGGGCTCCCAAGGAGGTACGTTTATTTTAT
TTCTTTTATCTCGCGCACTACACCTGCACACCTTTTATGATGAATAAGAG
TTTTACTCGAAATAACCCAGCTCGTCGAATGTCTCAAATTTTTTTCCAAC
GTAGAGGCATCATGAGATTACGTCCCGTCTGATTTACTTGATTATCATTG
ATTTTATTGTCTGCATAATCATCCTGGAGACATGCTGATTTGTCTAGGTT
GAAACCATCAACCCCCTGATGTTGCTCACTGCCAAGCCGGTTGTCTACCT
GGTCAACCTGAGTGAGAAGGACTACATCCGCCAGAAGAACAAGTACCTGC
CCAAGGTGTTCGAGTGGATCAAGACCAACTCTCCGGGTGACTCGCTGATC
CCCATCTCCGTCTCGTTCGAGGAGCGCCTGACCCGCTTCGAGAGCGACGA
GGCTGCCCTGGAGGAGTGCAAGAGCCTGAACACCAAGTCGGCCCTGCCCA
AGGTGATCACCACCATGCGTCAGGTGCTGAACCTGGCCAGTTTCTTCACC
ACCGGTACCGACGAGGTGCGCCAGTGGACCATCCGTAAGGGCATTAAGGC
TCCGGCTGCTGCTGGTGTTATCCACACCGACTTTGAGAAGACCTTTATCC
AGGCCGTTGTGTACAACTACGCGACTCTGCGTGAGTACGGAGACGAAGCT
GCCGTCAAGGCCGCTGGTAAGGTGATGACAAAGGGTAAGGATTACGTTGT
GGAGGATGGTGATATTCTGTTGATCAAGGCCGGTGCTGCCCGTGGTTAAA
TAATATATAGCCACTTACAATACCATTTATCATTGCCATTCAACTTTATA
CTTCAATTGTAGTAGTCAATAGCCAGTATTCAGTAATCTGTAGCCAGGAA
TCCATACTTTACGACGTATACAGCAGAGCATACGGCATAGCATTATAGCT
ACCCCACCGAACCACGTGACATCCCCCGCAACAGATCTGCGTGAAGATTG
CGATAGCCTCCGAATTCAACAACATACATACATACACACCAACCAGCAAG
ATGTTTAAGAAGGAGTGAGTGAAAACCAGCATAGTCATTACTACAGAACA
CCCATCAACTTCATCCATTTATTCCCCAATCCACCACCCTCCCTACAGCC
CAATCCCTCCTCACAGCTAGCTACCAAGCAGAACAACCAACTAACAACTC
AAACCACCATGATAACAGCATCCCCCCCAGCAACCGCTCAAAAGTCAAAT
CCTCCGTGCAGCGCGGCCTCCGCCAACGGTTCCTAGACACATACCCCGGC
TTCGAACCCTACATTGAAGAAGTCCTACCGAAGAAGGCCCAACTGGATGC
CGTGAAGCTGTACGGTCCCCCAATACCTACCTTCCTTCATACCCTTTCCC
CCCTTCCCACAAACTAA back to topCoding sequence (CDS) from alignment at KZ851904.1:558016..560682+ >M747DRAFT_274910-T1 ID=M747DRAFT_274910-T1|Name=M747DRAFT_274910-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=5664bp|location=Sequence derived from alignment at KZ851904.1:558016..560682+ (Aspergillus niger ATCC 13496)
ATGCCCCCCAAGAAGGCCGTCGTTCAAGAAAAGGTCCTACTGGGCCGTCC
AGGAAACAACCTGAAGAGTGGTATCGTTGGTCTCGCCAACGTCGGCAAGT
CCACGCTCTTCCAGGCCATTACCAAGTCGTCCCTTGGTAACCCTGCCAAC
TTCCCCTATGCTACCATTGACCCCGAAGAGGCGCGTGTCATTGTCCCCGA
TGACCGCTTCGACTGGCTTTGCGAGCACTACAAGCCCAAGTCTCAGGTTC
CCGCCAACTTGACCGTCTATGATATCGCCGGTCTGACCCGTGGTGCCTCC
ACCGGTGCCGGTCTCGGTAACGCTTTCTTGTCGCACATCCGTGCCGTCGA
TGCTATCTTCCAGGTCGTTCGTTGCTTCGATGATGCTGAGATTATCCACG
TCGAGGGTGACGTCGACCCCATCCGTGATCTGACCATCATCAGCGAGGAG
CTGCGTATCAAGGATATCGAGTTCGTCGAGAAGGCTCTCGAGAACCTTCA
GAAGCAGACCAAGCGTGGTGGTCAGACTCTGGAGATGAAGAAGCTGCGTG
AGGAAGAGGCCACTGTTGCCAAGGTGCTCGAGTGGCTCAAGGACGGCAAG
GACGTCCGCAAGAACGAATGGGCTCCCAAGGAGGTTGAAACCATCAACCC
CCTGATGTTGCTCACTGCCAAGCCGGTTGTCTACCTGGTCAACCTGAGTG
AGAAGGACTACATCCGCCAGAAGAACAAGTACCTGCCCAAGGTGTTCGAG
TGGATCAAGACCAACTCTCCGGGTGACTCGCTGATCCCCATCTCCGTCTC
GTTCGAGGAGCGCCTGACCCGCTTCGAGAGCGACGAGGCTGCCCTGGAGG
AGTGCAAGAGCCTGAACACCAAGTCGGCCCTGCCCAAGGTGATCACCACC
ATGCGTCAGGTGCTGAACCTGGCCAGTTTCTTCACCACCGGTACCGACGA
GGTGCGCCAGTGGACCATCCGTAAGGGCATTAAGGCTCCGGCTGCTGCTG
GTGTTATCCACACCGACTTTGAGAAGACCTTTATCCAGGCCGTTGTGTAC
AACTACGCGACTCTGCGTGAGTACGGAGACGAAGCTGCCGTCAAGGCCGC
TGGTAAGGTGATGACAAAGGGTAAGGATTACGTTGTGGAGGATGGTGATA
TTCTGTTGATCAAGGCCGGTGCTGCCCGTGAACAACCAACTAACAACTCA
AACCACCATGATAACAGCATCCCCCCCAGCAACCGCTCAAAAGTCAAATC
CTCCGTGCAGCGCGGCCTCCGCCAACGGTTCCTAGACACATACCCCGGCT
TCGAACCCTACATTGAAGAAGTCCTACCGAAGAAGGCCCAACTGGATGCC
GTGAAGCTGTACGGTCCCCCAATACCTACCTTCCTTCATACCCTTTCCCC
CCTTCCCACAAACTAAATGCCCCCCAAGAAGGCCGTCGTTCAAGAAAAGG
TCCTACTGGGCCGTCCAGGAAACAACCTGAAGAGTGGTATCGTTGGTCTC
GCCAACGTCGGCAAGTCCACGCTCTTCCAGGCCATTACCAAGTCGTCCCT
TGGTAACCCTGCCAACTTCCCCTATGCTACCATTGACCCCGAAGAGGCGC
GTGTCATTGTCCCCGATGACCGCTTCGACTGGCTTTGCGAGCACTACAAG
CCCAAGTCTCAGGTTCCCGCCAACTTGACCGTCTATGATATCGCCGGTCT
GACCCGTGGTGCCTCCACCGGTGCCGGTCTCGGTAACGCTTTCTTGTCGC
ACATCCGTGCCGTCGATGCTATCTTCCAGGTCGTTCGTTGCTTCGATGAT
GCTGAGATTATCCACGTCGAGGGTGACGTCGACCCCATCCGTGATCTGAC
CATCATCAGCGAGGAGCTGCGTATCAAGGATATCGAGTTCGTCGAGAAGG
CTCTCGAGAACCTTCAGAAGCAGACCAAGCGTGGTGGTCAGACTCTGGAG
ATGAAGAAGCTGCGTGAGGAAGAGGCCACTGTTGCCAAGGTGCTCGAGTG
GCTCAAGGACGGCAAGGACGTCCGCAAGAACGAATGGGCTCCCAAGGAGG
TTGAAACCATCAACCCCCTGATGTTGCTCACTGCCAAGCCGGTTGTCTAC
CTGGTCAACCTGAGTGAGAAGGACTACATCCGCCAGAAGAACAAGTACCT
GCCCAAGGTGTTCGAGTGGATCAAGACCAACTCTCCGGGTGACTCGCTGA
TCCCCATCTCCGTCTCGTTCGAGGAGCGCCTGACCCGCTTCGAGAGCGAC
GAGGCTGCCCTGGAGGAGTGCAAGAGCCTGAACACCAAGTCGGCCCTGCC
CAAGGTGATCACCACCATGCGTCAGGTGCTGAACCTGGCCAGTTTCTTCA
CCACCGGTACCGACGAGGTGCGCCAGTGGACCATCCGTAAGGGCATTAAG
GCTCCGGCTGCTGCTGGTGTTATCCACACCGACTTTGAGAAGACCTTTAT
CCAGGCCGTTGTGTACAACTACGCGACTCTGCGTGAGTACGGAGACGAAG
CTGCCGTCAAGGCCGCTGGTAAGGTGATGACAAAGGGTAAGGATTACGTT
GTGGAGGATGGTGATATTCTGTTGATCAAGGCCGGTGCTGCCCGTGAACA
ACCAACTAACAACTCAAACCACCATGATAACAGCATCCCCCCCAGCAACC
GCTCAAAAGTCAAATCCTCCGTGCAGCGCGGCCTCCGCCAACGGTTCCTA
GACACATACCCCGGCTTCGAACCCTACATTGAAGAAGTCCTACCGAAGAA
GGCCCAACTGGATGCCGTGAAGCTGTACGGTCCCCCAATACCTACCTTCC
TTCATACCCTTTCCCCCCTTCCCACAAACTAAATGCCCCCCAAGAAGGCC
GTCGTTCAAGAAAAGGTCCTACTGGGCCGTCCAGGAAACAACCTGAAGAG
TGGTATCGTTGGTCTCGCCAACGTCGGCAAGTCCACGCTCTTCCAGGCCA
TTACCAAGTCGTCCCTTGGTAACCCTGCCAACTTCCCCTATGCTACCATT
GACCCCGAAGAGGCGCGTGTCATTGTCCCCGATGACCGCTTCGACTGGCT
TTGCGAGCACTACAAGCCCAAGTCTCAGGTTCCCGCCAACTTGACCGTCT
ATGATATCGCCGGTCTGACCCGTGGTGCCTCCACCGGTGCCGGTCTCGGT
AACGCTTTCTTGTCGCACATCCGTGCCGTCGATGCTATCTTCCAGGTCGT
TCGTTGCTTCGATGATGCTGAGATTATCCACGTCGAGGGTGACGTCGACC
CCATCCGTGATCTGACCATCATCAGCGAGGAGCTGCGTATCAAGGATATC
GAGTTCGTCGAGAAGGCTCTCGAGAACCTTCAGAAGCAGACCAAGCGTGG
TGGTCAGACTCTGGAGATGAAGAAGCTGCGTGAGGAAGAGGCCACTGTTG
CCAAGGTGCTCGAGTGGCTCAAGGACGGCAAGGACGTCCGCAAGAACGAA
TGGGCTCCCAAGGAGGTTGAAACCATCAACCCCCTGATGTTGCTCACTGC
CAAGCCGGTTGTCTACCTGGTCAACCTGAGTGAGAAGGACTACATCCGCC
AGAAGAACAAGTACCTGCCCAAGGTGTTCGAGTGGATCAAGACCAACTCT
CCGGGTGACTCGCTGATCCCCATCTCCGTCTCGTTCGAGGAGCGCCTGAC
CCGCTTCGAGAGCGACGAGGCTGCCCTGGAGGAGTGCAAGAGCCTGAACA
CCAAGTCGGCCCTGCCCAAGGTGATCACCACCATGCGTCAGGTGCTGAAC
CTGGCCAGTTTCTTCACCACCGGTACCGACGAGGTGCGCCAGTGGACCAT
CCGTAAGGGCATTAAGGCTCCGGCTGCTGCTGGTGTTATCCACACCGACT
TTGAGAAGACCTTTATCCAGGCCGTTGTGTACAACTACGCGACTCTGCGT
GAGTACGGAGACGAAGCTGCCGTCAAGGCCGCTGGTAAGGTGATGACAAA
GGGTAAGGATTACGTTGTGGAGGATGGTGATATTCTGTTGATCAAGGCCG
GTGCTGCCCGTGAACAACCAACTAACAACTCAAACCACCATGATAACAGC
ATCCCCCCCAGCAACCGCTCAAAAGTCAAATCCTCCGTGCAGCGCGGCCT
CCGCCAACGGTTCCTAGACACATACCCCGGCTTCGAACCCTACATTGAAG
AAGTCCTACCGAAGAAGGCCCAACTGGATGCCGTGAAGCTGTACGGTCCC
CCAATACCTACCTTCCTTCATACCCTTTCCCCCCTTCCCACAAACTAAAT
GCCCCCCAAGAAGGCCGTCGTTCAAGAAAAGGTCCTACTGGGCCGTCCAG
GAAACAACCTGAAGAGTGGTATCGTTGGTCTCGCCAACGTCGGCAAGTCC
ACGCTCTTCCAGGCCATTACCAAGTCGTCCCTTGGTAACCCTGCCAACTT
CCCCTATGCTACCATTGACCCCGAAGAGGCGCGTGTCATTGTCCCCGATG
ACCGCTTCGACTGGCTTTGCGAGCACTACAAGCCCAAGTCTCAGGTTCCC
GCCAACTTGACCGTCTATGATATCGCCGGTCTGACCCGTGGTGCCTCCAC
CGGTGCCGGTCTCGGTAACGCTTTCTTGTCGCACATCCGTGCCGTCGATG
CTATCTTCCAGGTCGTTCGTTGCTTCGATGATGCTGAGATTATCCACGTC
GAGGGTGACGTCGACCCCATCCGTGATCTGACCATCATCAGCGAGGAGCT
GCGTATCAAGGATATCGAGTTCGTCGAGAAGGCTCTCGAGAACCTTCAGA
AGCAGACCAAGCGTGGTGGTCAGACTCTGGAGATGAAGAAGCTGCGTGAG
GAAGAGGCCACTGTTGCCAAGGTGCTCGAGTGGCTCAAGGACGGCAAGGA
CGTCCGCAAGAACGAATGGGCTCCCAAGGAGGTTGAAACCATCAACCCCC
TGATGTTGCTCACTGCCAAGCCGGTTGTCTACCTGGTCAACCTGAGTGAG
AAGGACTACATCCGCCAGAAGAACAAGTACCTGCCCAAGGTGTTCGAGTG
GATCAAGACCAACTCTCCGGGTGACTCGCTGATCCCCATCTCCGTCTCGT
TCGAGGAGCGCCTGACCCGCTTCGAGAGCGACGAGGCTGCCCTGGAGGAG
TGCAAGAGCCTGAACACCAAGTCGGCCCTGCCCAAGGTGATCACCACCAT
GCGTCAGGTGCTGAACCTGGCCAGTTTCTTCACCACCGGTACCGACGAGG
TGCGCCAGTGGACCATCCGTAAGGGCATTAAGGCTCCGGCTGCTGCTGGT
GTTATCCACACCGACTTTGAGAAGACCTTTATCCAGGCCGTTGTGTACAA
CTACGCGACTCTGCGTGAGTACGGAGACGAAGCTGCCGTCAAGGCCGCTG
GTAAGGTGATGACAAAGGGTAAGGATTACGTTGTGGAGGATGGTGATATT
CTGTTGATCAAGGCCGGTGCTGCCCGTGAACAACCAACTAACAACTCAAA
CCACCATGATAACAGCATCCCCCCCAGCAACCGCTCAAAAGTCAAATCCT
CCGTGCAGCGCGGCCTCCGCCAACGGTTCCTAGACACATACCCCGGCTTC
GAACCCTACATTGAAGAAGTCCTACCGAAGAAGGCCCAACTGGATGCCGT
GAAGCTGTACGGTCCCCCAATACCTACCTTCCTTCATACCCTTTCCCCCC
TTCCCACAAACTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005525 | GTP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262JWJ |
| DBxref | InterPro:IPR012676 |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR041706 |
| DBxref | InterPro:IPR031167 |
| DBxref | InterPro:IPR012675 |
| DBxref | InterPro:IPR023192 |
| DBxref | InterPro:IPR013029 |
| DBxref | InterPro:IPR004396 |
| DBxref | InterPro:IPR041366 |
| DBxref | InterPro:IPR006073 |
| DBxref | PFAM:PF06071 |
| DBxref | PFAM:PF17832 |
| DBxref | PFAM:PF01926 |
| Product | GTP-binding protein YchF |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851904.1 | supercontig | KZ851904.1:558016..560682 + |
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