M747DRAFT_274968-T1, M747DRAFT_274968-T1 (mRNA) Aspergillus niger ATCC 13496

Overview


Name	M747DRAFT_274968-T1
Unique Name	M747DRAFT_274968-T1
Type	mRNA
Organism	Aspergillus niger ATCC 13496

Sequences

The following sequences are available for this feature:

mRNA from alignment at KZ851904.1:642509..644913+
coding sequence from alignment at KZ851904.1:642509..644913+

mRNA from alignment at KZ851904.1:642509..644913+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>M747DRAFT_274968-T1 ID=M747DRAFT_274968-T1|Name=M747DRAFT_274968-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2405bp|location=Sequence derived from alignment at KZ851904.1:642509..644913+ (Aspergillus niger ATCC 13496)
TACCGCCCGGTAGCCAGCACAACGCCATTGGTTCGGGGTCTTTGGACGTG
TTATCAATCGAGCCATATCTAGTTCAGCCGCGCGCGCACGCCAGCACTCT
TGGAGACCTTGTCCAGTTTGATCTATACCTCACTTACCCATCGGTCATCG
TCGCATAAACTACACCACGATGGAGTCGTCACGCGGCCCTCCCAGGGTCA
AGAACAAGGCTGCGGCGCCAGTCCAGATCTCGGCGGAGCAGCTGCTTCGC
GAGGCCGTGGACCGGCAGGAGCCCGCATTGCAGGCGCCGACGCAGCGCTT
TGCCGACCTGGAAGAACTGCACGAATACCAGGGCCGCAAGCGAAAAGAGT
TCGAAGACTATGTGCGTCGGAACCGAATTAACATGAACAACTGGATGCGC
TATGCGGCATGGGAGCTGGAGCAAAAGGAGTTCCGCCGGGCGCGTTCAAT
CTTTGAACGGGCGCTGGACGTCAGCCCGACCTCGGTGGTTCTGTGGATTC
GGTACATCGAGTCGGAGATGCGGAATCGCAACATCAATCATGCCAGGAAC
TTGCTCGACCGTGCGGTGACGATCTTGCCTCGGGTGGATAAGCTGTGGTA
CAAGTATGTCTACATGGAGGAGACACTGGGCAACATTGCGGGTACACGAC
AGGTCTTTGAGCGGTGGATGTCTTGGGAGCCGGAAGAGGGAGCTTGGAGC
GCCTATATCAAGCTGGAAAAGCGGTACAATGAGTTCGAGAGGGCGCGCGC
GATCTTCCAGCGGTTCACCATTGTTCACCCTGAACCACGCAATTGGATCA
AGTGGGCTCGGTTTGAAGAGGAGTATGGAACGAGCGATCTCGTGCGGGAG
GTGTATGGAATGGCGATTGAGACTCTGGGAGAGGATTTCATGGACGAGAA
GCTCTTCATCGGCTATGCCAAGTTCGAGGCGAAGTTGAAGGAGTACGAAC
GTGCCCGGGCGATTTACAAGTATGCCTTAGACCGACTTCCTCGCTCAAAG
TCCACGGCCCTTCACAAGTCCTATACAACATTCGAGAAACAATATGGTGA
CCGGGAAGGCGTTGAGGATGTTATTCTCTCAAAACGCAGAGTCCAGTACG
AGGAGCAACTGAAAGAGAACTCGCGGAACTACGACATATGGTTCGACTTT
GCCCGGCTCGAGGAAACCTCGGGTGACCCCGACCGAGTACGCGACATCTA
CGAACGCGCAATCGCTCAGATACCACCATCGCAGGAGAAGCGGCACTGGA
GACGGTATATCTACCTGTGGGTATTCTACGCCATTTGGGAGGAAATGGAA
GCCAAGGACGCCGAGCGTGCGCGCCAAATCTACAACGAGTGTCTCAAGTT
GATTCCCCACAAAAAGTTCACCTTTGCCAAGATCTGGCTCCTGAAGGCGC
AGTTTGAGATCCGTCAGATGAATCTCCAAGCCGCTCGTAAGACGCTTGGC
CAGGCCATCGGCATGTGCCCGAAGGATAAACTCTTCCGGGGATACATTGA
TCTAGAGCGCCAGCTGTTCGAGTTCGTGCGGTGCCGGACACTGTTCGAAA
AGCAGATCGAGTGGAATCCTTCCAACAGCCAGTCATGGATCAAGTATGCC
GAATTGGAGCGCGGGCTGGACGACACCGACCGTGCACGAGCCATCTACGA
GCTTGGAATTGACCAGCCGACACTCGATATGCCCGAGTTGGTGTGGAAGT
CGTACATTGACTTTGAGGAGTACGAAGGCGAATACGACCGGGTCCGCCAG
CTCTACGAGCGTCTGCTGGAGAAGACAGATCACGTCAAGGTGTGGATTAA
CTACGCCCGCTTCGAGATCAACGTCCCCGACGAGGAAGAAGAGGAAGAGG
AGGAGGAAGAGGAGCGGCCGATCAGCGAGGATGCCAAGCGTCGTGCTCGG
GCCGTTTTCGAACGAGCTCACAAGGTGTTCAAGGAGAAGGAGCTCAAGGA
AGAGGTAAGCTGTACTCGACATTCCTTTTCTAACATATCCCTGACTAACC
ATGACACAGCGCGTGGAATTGCTCAATGCTTGGCGGTCATTCGAGCACAC
GCACGGTTCACCAGAAGACATCGACAAGATCGAGAAACAGATGCCCCGGC
GAGTCAAGAAGCGGCGCAAGTTGGACGACGATCGGTACGAGGAGTACATG
GATTACGTATTCCCAGCAGACGACCAGTCGGCGGCGAATCTGTCGAAGCT
GCTGCAAAGAGCTCACCAATGGAAGCAGCAACAGCAACAACAGGGGGATG
GAGCATAGATGGATGTACCAGGGTAATTCTATACATAGCTGGGAAAATAA
TGGCATCACGAGATGTATCATGTCAGTGGTACTTGCTCTTGCATCTGGTT
ACACGTGCGATTACCAATTTTGTGTAGTACCAATCCATCTTCTGGCACTC
CGTGG

Coding sequence (CDS) from alignment at KZ851904.1:642509..644913+

>M747DRAFT_274968-T1 ID=M747DRAFT_274968-T1|Name=M747DRAFT_274968-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4068bp|location=Sequence derived from alignment at KZ851904.1:642509..644913+ (Aspergillus niger ATCC 13496)
ATGGAGTCGTCACGCGGCCCTCCCAGGGTCAAGAACAAGGCTGCGGCGCC
AGTCCAGATCTCGGCGGAGCAGCTGCTTCGCGAGGCCGTGGACCGGCAGG
AGCCCGCATTGCAGGCGCCGACGCAGCGCTTTGCCGACCTGGAAGAACTG
CACGAATACCAGGGCCGCAAGCGAAAAGAGTTCGAAGACTATGTGCGTCG
GAACCGAATTAACATGAACAACTGGATGCGCTATGCGGCATGGGAGCTGG
AGCAAAAGGAGTTCCGCCGGGCGCGTTCAATCTTTGAACGGGCGCTGGAC
GTCAGCCCGACCTCGGTGGTTCTGTGGATTCGGTACATCGAGTCGGAGAT
GCGGAATCGCAACATCAATCATGCCAGGAACTTGCTCGACCGTGCGGTGA
CGATCTTGCCTCGGGTGGATAAGCTGTGGTACAAGTATGTCTACATGGAG
GAGACACTGGGCAACATTGCGGGTACACGACAGGTCTTTGAGCGGTGGAT
GTCTTGGGAGCCGGAAGAGGGAGCTTGGAGCGCCTATATCAAGCTGGAAA
AGCGGTACAATGAGTTCGAGAGGGCGCGCGCGATCTTCCAGCGGTTCACC
ATTGTTCACCCTGAACCACGCAATTGGATCAAGTGGGCTCGGTTTGAAGA
GGAGTATGGAACGAGCGATCTCGTGCGGGAGGTGTATGGAATGGCGATTG
AGACTCTGGGAGAGGATTTCATGGACGAGAAGCTCTTCATCGGCTATGCC
AAGTTCGAGGCGAAGTTGAAGGAGTACGAACGTGCCCGGGCGATTTACAA
GTATGCCTTAGACCGACTTCCTCGCTCAAAGTCCACGGCCCTTCACAAGT
CCTATACAACATTCGAGAAACAATATGGTGACCGGGAAGGCGTTGAGGAT
GTTATTCTCTCAAAACGCAGAGTCCAGTACGAGGAGCAACTGAAAGAGAA
CTCGCGGAACTACGACATATGGTTCGACTTTGCCCGGCTCGAGGAAACCT
CGGGTGACCCCGACCGAGTACGCGACATCTACGAACGCGCAATCGCTCAG
ATACCACCATCGCAGGAGAAGCGGCACTGGAGACGGTATATCTACCTGTG
GGTATTCTACGCCATTTGGGAGGAAATGGAAGCCAAGGACGCCGAGCGTG
CGCGCCAAATCTACAACGAGTGTCTCAAGTTGATTCCCCACAAAAAGTTC
ACCTTTGCCAAGATCTGGCTCCTGAAGGCGCAGTTTGAGATCCGTCAGAT
GAATCTCCAAGCCGCTCGTAAGACGCTTGGCCAGGCCATCGGCATGTGCC
CGAAGGATAAACTCTTCCGGGGATACATTGATCTAGAGCGCCAGCTGTTC
GAGTTCGTGCGGTGCCGGACACTGTTCGAAAAGCAGATCGAGTGGAATCC
TTCCAACAGCCAGTCATGGATCAAGTATGCCGAATTGGAGCGCGGGCTGG
ACGACACCGACCGTGCACGAGCCATCTACGAGCTTGGAATTGACCAGCCG
ACACTCGATATGCCCGAGTTGGTGTGGAAGTCGTACATTGACTTTGAGGA
GTACGAAGGCGAATACGACCGGGTCCGCCAGCTCTACGAGCGTCTGCTGG
AGAAGACAGATCACGTCAAGGTGTGGATTAACTACGCCCGCTTCGAGATC
AACGTCCCCGACGAGGAAGAAGAGGAAGAGGAGGAGGAAGAGGAGCGGCC
GATCAGCGAGGATGCCAAGCGTCGTGCTCGGGCCGTTTTCGAACGAGCTC
ACAAGGTGTTCAAGGAGAAGGAGCTCAAGGAAGAGCGCGTGGAATTGCTC
AATGCTTGGCGGTCATTCGAGCACACGCACGGTTCACCAGAAGACATCGA
CAAGATCGAGAAACAGATGCCCCGGCGAGTCAAGAAGCGGCGCAAGTTGG
ACGACGATCGGTACGAGGAGTACATGGATTACGTATTCCCAGCAGACGAC
CAGTCGGCGGCGAATCTGTCGAAGCTGCTGCAAAGAGCTCACCAATGGAA
GCAGCAACAGCAACAACAGGGGGATGGAGCATAGATGGAGTCGTCACGCG
GCCCTCCCAGGGTCAAGAACAAGGCTGCGGCGCCAGTCCAGATCTCGGCG
GAGCAGCTGCTTCGCGAGGCCGTGGACCGGCAGGAGCCCGCATTGCAGGC
GCCGACGCAGCGCTTTGCCGACCTGGAAGAACTGCACGAATACCAGGGCC
GCAAGCGAAAAGAGTTCGAAGACTATGTGCGTCGGAACCGAATTAACATG
AACAACTGGATGCGCTATGCGGCATGGGAGCTGGAGCAAAAGGAGTTCCG
CCGGGCGCGTTCAATCTTTGAACGGGCGCTGGACGTCAGCCCGACCTCGG
TGGTTCTGTGGATTCGGTACATCGAGTCGGAGATGCGGAATCGCAACATC
AATCATGCCAGGAACTTGCTCGACCGTGCGGTGACGATCTTGCCTCGGGT
GGATAAGCTGTGGTACAAGTATGTCTACATGGAGGAGACACTGGGCAACA
TTGCGGGTACACGACAGGTCTTTGAGCGGTGGATGTCTTGGGAGCCGGAA
GAGGGAGCTTGGAGCGCCTATATCAAGCTGGAAAAGCGGTACAATGAGTT
CGAGAGGGCGCGCGCGATCTTCCAGCGGTTCACCATTGTTCACCCTGAAC
CACGCAATTGGATCAAGTGGGCTCGGTTTGAAGAGGAGTATGGAACGAGC
GATCTCGTGCGGGAGGTGTATGGAATGGCGATTGAGACTCTGGGAGAGGA
TTTCATGGACGAGAAGCTCTTCATCGGCTATGCCAAGTTCGAGGCGAAGT
TGAAGGAGTACGAACGTGCCCGGGCGATTTACAAGTATGCCTTAGACCGA
CTTCCTCGCTCAAAGTCCACGGCCCTTCACAAGTCCTATACAACATTCGA
GAAACAATATGGTGACCGGGAAGGCGTTGAGGATGTTATTCTCTCAAAAC
GCAGAGTCCAGTACGAGGAGCAACTGAAAGAGAACTCGCGGAACTACGAC
ATATGGTTCGACTTTGCCCGGCTCGAGGAAACCTCGGGTGACCCCGACCG
AGTACGCGACATCTACGAACGCGCAATCGCTCAGATACCACCATCGCAGG
AGAAGCGGCACTGGAGACGGTATATCTACCTGTGGGTATTCTACGCCATT
TGGGAGGAAATGGAAGCCAAGGACGCCGAGCGTGCGCGCCAAATCTACAA
CGAGTGTCTCAAGTTGATTCCCCACAAAAAGTTCACCTTTGCCAAGATCT
GGCTCCTGAAGGCGCAGTTTGAGATCCGTCAGATGAATCTCCAAGCCGCT
CGTAAGACGCTTGGCCAGGCCATCGGCATGTGCCCGAAGGATAAACTCTT
CCGGGGATACATTGATCTAGAGCGCCAGCTGTTCGAGTTCGTGCGGTGCC
GGACACTGTTCGAAAAGCAGATCGAGTGGAATCCTTCCAACAGCCAGTCA
TGGATCAAGTATGCCGAATTGGAGCGCGGGCTGGACGACACCGACCGTGC
ACGAGCCATCTACGAGCTTGGAATTGACCAGCCGACACTCGATATGCCCG
AGTTGGTGTGGAAGTCGTACATTGACTTTGAGGAGTACGAAGGCGAATAC
GACCGGGTCCGCCAGCTCTACGAGCGTCTGCTGGAGAAGACAGATCACGT
CAAGGTGTGGATTAACTACGCCCGCTTCGAGATCAACGTCCCCGACGAGG
AAGAAGAGGAAGAGGAGGAGGAAGAGGAGCGGCCGATCAGCGAGGATGCC
AAGCGTCGTGCTCGGGCCGTTTTCGAACGAGCTCACAAGGTGTTCAAGGA
GAAGGAGCTCAAGGAAGAGCGCGTGGAATTGCTCAATGCTTGGCGGTCAT
TCGAGCACACGCACGGTTCACCAGAAGACATCGACAAGATCGAGAAACAG
ATGCCCCGGCGAGTCAAGAAGCGGCGCAAGTTGGACGACGATCGGTACGA
GGAGTACATGGATTACGTATTCCCAGCAGACGACCAGTCGGCGGCGAATC
TGTCGAAGCTGCTGCAAAGAGCTCACCAATGGAAGCAGCAACAGCAACAA
CAGGGGGATGGAGCATAG

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006396	RNA processing

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
CLF1	M747DRAFT_274968	Aspergillus niger ATCC 13496	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
M747DRAFT_274968-T1.utr5p1	M747DRAFT_274968-T1.utr5p1	Aspergillus niger ATCC 13496	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
M747DRAFT_274968-T1.exon1	M747DRAFT_274968-T1.exon1	Aspergillus niger ATCC 13496	exon
M747DRAFT_274968-T1.exon2	M747DRAFT_274968-T1.exon2	Aspergillus niger ATCC 13496	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
M747DRAFT_274968-T1.cds	M747DRAFT_274968-T1.cds	Aspergillus niger ATCC 13496	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
M747DRAFT_274968-T1.utr3p1	M747DRAFT_274968-T1.utr3p1	Aspergillus niger ATCC 13496	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
M747DRAFT_274968-T1	M747DRAFT_274968-T1-protein	Aspergillus niger ATCC 13496	polypeptide

Properties


Property Name	Value
DBxref	InterPro:IPR013026
DBxref	InterPro:IPR019734
DBxref	InterPro:IPR011990
DBxref	InterPro:IPR003107
DBxref	PFAM:PF02184
Product	NineTeen Complex (NTC) component

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Aspergillus niger ATCC 13496 whole genome analysis	2021-10-31

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
KZ851904.1	supercontig	KZ851904.1:642509..644913 +

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M747DRAFT_274968-T1, M747DRAFT_274968-T1 (mRNA) Aspergillus niger ATCC 13496

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M747DRAFT_274968-T1, M747DRAFT_274968-T1 (mRNA) Aspergillus niger ATCC 13496