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M747DRAFT_275664-T1, M747DRAFT_275664-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_275664-T1
Unique NameM747DRAFT_275664-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851905.1:640493..642202-

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_275664-T1 ID=M747DRAFT_275664-T1|Name=M747DRAFT_275664-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1710bp|location=Sequence derived from alignment at KZ851905.1:640493..642202- (Aspergillus niger ATCC 13496)
ATTTCATAATATGGCCTTCACGTACTCTTCATTCATTACATGAACATCCG
GGGAAGCAGGAAGCTACCTTGGCTGTTGTCTGGGCAGCTCTCCACACTTG
GCTAACTGTCACAATTTCTCCACCAATGCCAGCCTAACGCGGTGCTGTCT
TGGTTGATCTATACGCCGATCAGGTCTCGCGCATACTCTACTCGCGGCCT
CTTGAGGAAATTTCCCGGTTAATGGACCTGAGAGATTTGCAAATTTCCGA
ACGCTTGTCATGTCTAATGGCATGGCAATTGGAGACCCTGAACCTCGGGA
GCGCAACATTATGTTGTAATATAAGTAAGGGTACGTATGCAAGTGTTACT
GGTTATTCAGTGAGCTACTGGCTATTCACGCATCGTCATGTCTGTCTTCA
AGGCATCATTCCTATTTCTTCTTTCCTCCTCACTAGTCCACGGGGTTCCA
CACTCCAGCAGAGCATCTCGGAGCCAACAATGCGTGGTTCCGTCCAAATA
CCAGGCATCGAATGGGATGGCTGATGACTCGGCTGCTGTCTCCCAGGCCT
TTGCACAATGCGCGACTGACTCGGTTATTATTTTCGAGGAGGGTGTCAAC
TATAACATCTTTCAGCCGATCACCGCCACCAACCTCAGCAATGTGGAAAT
CCGGATGCACGGCAACCTGCATCTGCCACAGAATATCACTGCGGTGCAGA
ATATAGTCAGTGACGGTACTTCTACATGGTTTACCCTAGAAGGACCAAAA
GTGGACTGGATTGGTCCTGAAGACGTGAACAATGGTTGGATTGACTCGTA
CGGACAACCGTGGTGGGATGCGAACCCTGCAGGTAGTTCAGGCATCGATA
ACCGTCCGCATCTCATGAGCTTCAAGTCTAGCCAAGCCACTATGAAATAC
TTCAGGTCTAGGAAGCCCATCGCCTGGAATGTCAAACTGCATGGACAAGA
CATTACAGTCAGCCACGCTATTATCGACGCTACCTCGACAGGTAGCTTCC
CATTCAACACTGACGGTTTCGATGTTGAGGGTACCAATATCCAGATCACC
GACAGTATCATGTACAACGGCGACGATGCGATTGCAGTAGGCGCGGACTC
GCACGACACACTTTTCACAAGAAACACCATCGGCTACCAGACTCACGGCA
TGAGCATTGGATCGCTGGGAAAGGATCCCACAGACTTCGCCAATATCAGC
AACATCCGCTTTGACGATGTGACTGTTGTCGATGGGCTCTACGCAGCACG
CTTCAAGTCATGGAGCGGAGGGACCGGACTCGTCAAGAATGTGACCTGGA
ACAATATTAGAGTCTTCAACGTGACGTTCCCGATCTTTGTGACTCAGAGT
TATAGCGACCAAGGCGCCTCCCGGTCTGGAACTGTCAATGCTAGTTCGGC
TGTGATGATGGAGGATTTTACCTGGTCTGACTTTGCTGGCTCGATCAATA
CGTACCAGCCTGGTGACGGTTCTTGCGTTTCCGACCCTTGCTGGTACAAC
GTTGGGCTGCCAAATTTGAAGCATACGGAGGCCCTCATTATCGAATGCCA
TACTGCTCAATCTTGTAAGAACTTTGTGACGGACAACATCCAGCTATACC
CGCAGGTTCTGGAACCAGCGAGTGTGATCTGCATGAACGCAACGGCAGCC
CTCAATCCTGATCTTGGATTTACATGTAAAAACGGGACCTACAGCCCATT
ATCTAATTAA
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Coding sequence (CDS) from alignment at KZ851905.1:640493..642202-

>M747DRAFT_275664-T1 ID=M747DRAFT_275664-T1|Name=M747DRAFT_275664-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1323bp|location=Sequence derived from alignment at KZ851905.1:640493..642202- (Aspergillus niger ATCC 13496)
ATGTCTGTCTTCAAGGCATCATTCCTATTTCTTCTTTCCTCCTCACTAGT
CCACGGGGTTCCACACTCCAGCAGAGCATCTCGGAGCCAACAATGCGTGG
TTCCGTCCAAATACCAGGCATCGAATGGGATGGCTGATGACTCGGCTGCT
GTCTCCCAGGCCTTTGCACAATGCGCGACTGACTCGGTTATTATTTTCGA
GGAGGGTGTCAACTATAACATCTTTCAGCCGATCACCGCCACCAACCTCA
GCAATGTGGAAATCCGGATGCACGGCAACCTGCATCTGCCACAGAATATC
ACTGCGGTGCAGAATATAGTCAGTGACGGTACTTCTACATGGTTTACCCT
AGAAGGACCAAAAGTGGACTGGATTGGTCCTGAAGACGTGAACAATGGTT
GGATTGACTCGTACGGACAACCGTGGTGGGATGCGAACCCTGCAGGTAGT
TCAGGCATCGATAACCGTCCGCATCTCATGAGCTTCAAGTCTAGCCAAGC
CACTATGAAATACTTCAGGTCTAGGAAGCCCATCGCCTGGAATGTCAAAC
TGCATGGACAAGACATTACAGTCAGCCACGCTATTATCGACGCTACCTCG
ACAGGTAGCTTCCCATTCAACACTGACGGTTTCGATGTTGAGGGTACCAA
TATCCAGATCACCGACAGTATCATGTACAACGGCGACGATGCGATTGCAG
TAGGCGCGGACTCGCACGACACACTTTTCACAAGAAACACCATCGGCTAC
CAGACTCACGGCATGAGCATTGGATCGCTGGGAAAGGATCCCACAGACTT
CGCCAATATCAGCAACATCCGCTTTGACGATGTGACTGTTGTCGATGGGC
TCTACGCAGCACGCTTCAAGTCATGGAGCGGAGGGACCGGACTCGTCAAG
AATGTGACCTGGAACAATATTAGAGTCTTCAACGTGACGTTCCCGATCTT
TGTGACTCAGAGTTATAGCGACCAAGGCGCCTCCCGGTCTGGAACTGTCA
ATGCTAGTTCGGCTGTGATGATGGAGGATTTTACCTGGTCTGACTTTGCT
GGCTCGATCAATACGTACCAGCCTGGTGACGGTTCTTGCGTTTCCGACCC
TTGCTGGTACAACGTTGGGCTGCCAAATTTGAAGCATACGGAGGCCCTCA
TTATCGAATGCCATACTGCTCAATCTTGTAAGAACTTTGTGACGGACAAC
ATCCAGCTATACCCGCAGGTTCTGGAACCAGCGAGTGTGATCTGCATGAA
CGCAACGGCAGCCCTCAATCCTGATCTTGGATTTACATGTAAAAACGGGA
CCTACAGCCCATTATCTAATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_275664M747DRAFT_275664Aspergillus niger ATCC 13496gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_275664-T1.cdsM747DRAFT_275664-T1.cdsAspergillus niger ATCC 13496CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_275664-T1.exon1M747DRAFT_275664-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_275664-T1.utr5p1M747DRAFT_275664-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_275664-T1M747DRAFT_275664-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-19)
NoteCAZy:GH28
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR000743
DBxrefInterPro:IPR012334
DBxrefPFAM:PF00295
Productputative exopolygalacturonase C
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851905.1supercontigKZ851905.1:640493..642202 -
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