You are here

Home

M747DRAFT_275671-T1, M747DRAFT_275671-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_275671-T1
Unique NameM747DRAFT_275671-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851905.1:649713..651844+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_275671-T1 ID=M747DRAFT_275671-T1|Name=M747DRAFT_275671-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2132bp|location=Sequence derived from alignment at KZ851905.1:649713..651844+ (Aspergillus niger ATCC 13496)
CTTCTCTCCTGTACCTGACTAACTATCGCCCACCCCGCTCGGTTGGTGGA
ATGCAAACACGATGCACCCTGACTTAAAGCTATAAATTGCCTGCTCCACA
TTACGTGCCTGAACTCAACCCGATCATTCGGTGCCTTGATTCTGCTGCCT
ATCATCTACATGCGGCACGCCCCCACCACGACTGCCGCTGGTCTCGCGCC
AGACGTCAATGAACTGCGACTGCTGCGACAGGCCTGCTGATTTCTCTTCG
ATTTAATTCTCATCATCGACTGCCATCGTCTCATGCGCAGCCATGGCCGC
CCATCTACCTCCGGCTACCGGTGCGGGGTCCCCGCAGAGTGTGGAATCAA
TCACTCGCATGGCTCAGGATTATGAGTACAACCCGTCTATACCTCTACGC
TACTGGCTGCGAACAGCGTCTACTCTCATGAGAGAGGTTGGTAGACTTGC
TGCTTGGCTATTGTGGAGTGAGCTAACTGATGTGGTGGCTTAGGCTCGGA
TTTACGAACGCGAAAAGCACGAAGAACAAGCCTACCTTTTATTGTTTCGC
CATGCTCAGTTGGTACTTGTCAATTTGGCGGAGCATCCAGAGGCCAGAGA
TGAAAAGAATCGGAAAGCTTTGGTGGAAGCCGAAAAGGAGGTCAAACGAA
ACCTGAAGGTCCTCGAAGTTCTGAAACCCCGGATCAACAAACGCTACGAG
CGCTATACTCAGTTGATGCGTGAACGGCAAGCTCGCGCACCAGCAGCGGC
GAATAACACTCCCACTTCAACCCAGAGACCCCCTCAAGATCCCGCCCTCG
CAGGGGTCGTGGAACCTCTGGAAGCAGGAGAGAACAAAGACCTGGCGGTG
CAGCTGGCTCGGACGGAGCTTAGCCGACGAGCAACTGTCCGAAAGGCTAT
CCGACAAGCAGGCATAACACCTGAAGAGGAGCAGACTCGTCGGGCTGCTG
GCGTGTGGGGAGACTGGGAGCATGCCCTGCGCAAAGATGGAACCGAGGAC
GATGACTTGAGCCGGCGCATACAGAACGTGAGAATCCAGATGGACGATCC
GCGGGCGGATCACCGTCCACAGGTTGCCACTAAGCCTATGGTCCGGCCAT
CTGCCGCAACCTCTTCAACCGGCACATACAAGTATCCGAGCGTCCCTCGT
CAGAAGCCGCTGGAAGTTCCGTCGGCCGCAAAGGTGGAGCCTGAGAAGAG
GATTGTTCTTCCGCCCAAAGCGCCCGCACTGCCTCCTAAGGAAACTTCGT
ATGTACATGAACTGGCTGGCCTTGAAGGACCTTCACCTCCACCTCGTCCA
GACAAGGTCTCGCCCGCAGCGATCCCGGCTGAGCCTCCTGTGCTTCCTGG
AAAGGTTCCAGCAACCGATGGGTCAGCTGCCAGCCCGAATTTGGACCCGT
CCAGCTATACCTTCAAGCCCTCTGCTTATCTAGAGAACGGAACGCCTCTG
CGGACGTTGTTCCTGCCACCTGATCTACGCAAGCACTTCATCTCACTGGT
ATCCCCGAATACGCAGCGCAATCTAGAGACGTGCGGCATTTTGTGCGGCA
CGCTAGTCTCCAACGCCTTGTTCGTTTCGAGGCTGCTCATCCCTGAACAG
ACGGCCACGTCGGACACGTGCGAGACGGTGAACGAGTCTGCGATCTTCGA
CTACTGCGATTCAGAGGACTTGATGGTGCTCGGCTGGATCCACACGCACC
CGACACAGACGTGCTTTATGAGCTCGCGCGACCTCCACACACATTGCGGA
TACCAGGTGATGCTGCCGGAGAGCATTGCGATTGTGTGCGCGCCCAGCAA
GACGCCCGACTGGGGAGTGTTCCGGCTGACGGATCCTCCGGGGCTGAAGA
CGGTGCTCAACTGCACGCAGTCGGGACTCTTCCATCCCCATGGAGAGGCA
AACATTTACACAGATGCGCTGCGCCCGGGACATGTATTTGAGGCAAAAGG
ATTGGAGTTCGAGACGGTGGATCTGCGCCCCAAGGGGTCTCAATTCTGAC
ATTAGATCTTTGTTGCCAATTTACTTTGAGCGTCAATAGCATATGATTAC
ATGATAAGGAGCTAATGAGGAATGATGCACTAGTCTATACCTTACTACTT
AGTCTGTCAGCTAGACACCCAAGAAAATAGCT
back to top

Coding sequence (CDS) from alignment at KZ851905.1:649713..651844+

>M747DRAFT_275671-T1 ID=M747DRAFT_275671-T1|Name=M747DRAFT_275671-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3300bp|location=Sequence derived from alignment at KZ851905.1:649713..651844+ (Aspergillus niger ATCC 13496)
ATGGCCGCCCATCTACCTCCGGCTACCGGTGCGGGGTCCCCGCAGAGTGT
GGAATCAATCACTCGCATGGCTCAGGATTATGAGTACAACCCGTCTATAC
CTCTACGCTACTGGCTGCGAACAGCGTCTACTCTCATGAGAGAGGCTCGG
ATTTACGAACGCGAAAAGCACGAAGAACAAGCCTACCTTTTATTGTTTCG
CCATGCTCAGTTGGTACTTGTCAATTTGGCGGAGCATCCAGAGGCCAGAG
ATGAAAAGAATCGGAAAGCTTTGGTGGAAGCCGAAAAGGAGGTCAAACGA
AACCTGAAGGTCCTCGAAGTTCTGAAACCCCGGATCAACAAACGCTACGA
GCGCTATACTCAGTTGATGCGTGAACGGCAAGCTCGCGCACCAGCAGCGG
CGAATAACACTCCCACTTCAACCCAGAGACCCCCTCAAGATCCCGCCCTC
GCAGGGGTCGTGGAACCTCTGGAAGCAGGAGAGAACAAAGACCTGGCGGT
GCAGCTGGCTCGGACGGAGCTTAGCCGACGAGCAACTGTCCGAAAGGCTA
TCCGACAAGCAGGCATAACACCTGAAGAGGAGCAGACTCGTCGGGCTGCT
GGCGTGTGGGGAGACTGGGAGCATGCCCTGCGCAAAGATGGAACCGAGGA
CGATGACTTGAGCCGGCGCATACAGAACGTGAGAATCCAGATGGACGATC
CGCGGGCGGATCACCGTCCACAGGTTGCCACTAAGCCTATGGTCCGGCCA
TCTGCCGCAACCTCTTCAACCGGCACATACAAGTATCCGAGCGTCCCTCG
TCAGAAGCCGCTGGAAGTTCCGTCGGCCGCAAAGGTGGAGCCTGAGAAGA
GGATTGTTCTTCCGCCCAAAGCGCCCGCACTGCCTCCTAAGGAAACTTCG
TATGTACATGAACTGGCTGGCCTTGAAGGACCTTCACCTCCACCTCGTCC
AGACAAGGTCTCGCCCGCAGCGATCCCGGCTGAGCCTCCTGTGCTTCCTG
GAAAGGTTCCAGCAACCGATGGGTCAGCTGCCAGCCCGAATTTGGACCCG
TCCAGCTATACCTTCAAGCCCTCTGCTTATCTAGAGAACGGAACGCCTCT
GCGGACGTTGTTCCTGCCACCTGATCTACGCAAGCACTTCATCTCACTGG
TATCCCCGAATACGCAGCGCAATCTAGAGACGTGCGGCATTTTGTGCGGC
ACGCTAGTCTCCAACGCCTTGTTCGTTTCGAGGCTGCTCATCCCTGAACA
GACGGCCACGTCGGACACGTGCGAGACGGTGAACGAGTCTGCGATCTTCG
ACTACTGCGATTCAGAGGACTTGATGGTGCTCGGCTGGATCCACACGCAC
CCGACACAGACGTGCTTTATGAGCTCGCGCGACCTCCACACACATTGCGG
ATACCAGGTGATGCTGCCGGAGAGCATTGCGATTGTGTGCGCGCCCAGCA
AGACGCCCGACTGGGGAGTGTTCCGGCTGACGGATCCTCCGGGGCTGAAG
ACGGTGCTCAACTGCACGCAGTCGGGACTCTTCCATCCCCATGGAGAGGC
AAACATTTACACAGATGCGCTGCGCCCGGGACATGTATTTGAGGCAAAAG
GATTGGAGTTCGAGACGGTGGATCTGCGCCCCAAGGGGTCTCAATTCTGA
ATGGCCGCCCATCTACCTCCGGCTACCGGTGCGGGGTCCCCGCAGAGTGT
GGAATCAATCACTCGCATGGCTCAGGATTATGAGTACAACCCGTCTATAC
CTCTACGCTACTGGCTGCGAACAGCGTCTACTCTCATGAGAGAGGCTCGG
ATTTACGAACGCGAAAAGCACGAAGAACAAGCCTACCTTTTATTGTTTCG
CCATGCTCAGTTGGTACTTGTCAATTTGGCGGAGCATCCAGAGGCCAGAG
ATGAAAAGAATCGGAAAGCTTTGGTGGAAGCCGAAAAGGAGGTCAAACGA
AACCTGAAGGTCCTCGAAGTTCTGAAACCCCGGATCAACAAACGCTACGA
GCGCTATACTCAGTTGATGCGTGAACGGCAAGCTCGCGCACCAGCAGCGG
CGAATAACACTCCCACTTCAACCCAGAGACCCCCTCAAGATCCCGCCCTC
GCAGGGGTCGTGGAACCTCTGGAAGCAGGAGAGAACAAAGACCTGGCGGT
GCAGCTGGCTCGGACGGAGCTTAGCCGACGAGCAACTGTCCGAAAGGCTA
TCCGACAAGCAGGCATAACACCTGAAGAGGAGCAGACTCGTCGGGCTGCT
GGCGTGTGGGGAGACTGGGAGCATGCCCTGCGCAAAGATGGAACCGAGGA
CGATGACTTGAGCCGGCGCATACAGAACGTGAGAATCCAGATGGACGATC
CGCGGGCGGATCACCGTCCACAGGTTGCCACTAAGCCTATGGTCCGGCCA
TCTGCCGCAACCTCTTCAACCGGCACATACAAGTATCCGAGCGTCCCTCG
TCAGAAGCCGCTGGAAGTTCCGTCGGCCGCAAAGGTGGAGCCTGAGAAGA
GGATTGTTCTTCCGCCCAAAGCGCCCGCACTGCCTCCTAAGGAAACTTCG
TATGTACATGAACTGGCTGGCCTTGAAGGACCTTCACCTCCACCTCGTCC
AGACAAGGTCTCGCCCGCAGCGATCCCGGCTGAGCCTCCTGTGCTTCCTG
GAAAGGTTCCAGCAACCGATGGGTCAGCTGCCAGCCCGAATTTGGACCCG
TCCAGCTATACCTTCAAGCCCTCTGCTTATCTAGAGAACGGAACGCCTCT
GCGGACGTTGTTCCTGCCACCTGATCTACGCAAGCACTTCATCTCACTGG
TATCCCCGAATACGCAGCGCAATCTAGAGACGTGCGGCATTTTGTGCGGC
ACGCTAGTCTCCAACGCCTTGTTCGTTTCGAGGCTGCTCATCCCTGAACA
GACGGCCACGTCGGACACGTGCGAGACGGTGAACGAGTCTGCGATCTTCG
ACTACTGCGATTCAGAGGACTTGATGGTGCTCGGCTGGATCCACACGCAC
CCGACACAGACGTGCTTTATGAGCTCGCGCGACCTCCACACACATTGCGG
ATACCAGGTGATGCTGCCGGAGAGCATTGCGATTGTGTGCGCGCCCAGCA
AGACGCCCGACTGGGGAGTGTTCCGGCTGACGGATCCTCCGGGGCTGAAG
ACGGTGCTCAACTGCACGCAGTCGGGACTCTTCCATCCCCATGGAGAGGC
AAACATTTACACAGATGCGCTGCGCCCGGGACATGTATTTGAGGCAAAAG
GATTGGAGTTCGAGACGGTGGATCTGCGCCCCAAGGGGTCTCAATTCTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_275671M747DRAFT_275671Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_275671-T1.utr5p1M747DRAFT_275671-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_275671-T1.exon1M747DRAFT_275671-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_275671-T1.exon2M747DRAFT_275671-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_275671-T1.cdsM747DRAFT_275671-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_275671-T1.utr3p1M747DRAFT_275671-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_275671-T1M747DRAFT_275671-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteMEROPS:MER0029722
DBxrefInterPro:IPR037518
DBxrefInterPro:IPR015063
DBxrefInterPro:IPR000555
DBxrefPFAM:PF08969
DBxrefPFAM:PF01398
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851905.1supercontigKZ851905.1:649713..651844 +
Powered by Drupal