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M747DRAFT_276739-T1, M747DRAFT_276739-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_276739-T1
Unique NameM747DRAFT_276739-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851907.1:650957..652220+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_276739-T1 ID=M747DRAFT_276739-T1|Name=M747DRAFT_276739-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1264bp|location=Sequence derived from alignment at KZ851907.1:650957..652220+ (Aspergillus niger ATCC 13496)
GCGAAACTTGACGTATACGAACCATTTGATTTTCTATTCGCATCTAGCTG
GGAATATACTATCCTTTGGAATCTGTTCCATCAAGATATCCCGCACCCGC
GACTCGCGTGTCCCGCCACTAAGTACATCTCTCCTCCGCTCCCCCCTCCT
AAGAATAACCACCACCACCACCACTCACCCCCTCAGTATACACCTCGAAC
GAACGACAATATACCAGACAATGCGCTAACCGTAATGCCCAGGAACCGAT
ATCTAATCTCTGCATACAATCCGATCAAAATGCCTGCCTCCGTCCACTCC
GAAGAACAAGACCAGTCCATGCTGGACGCCTCCGCGCCTCAAGAGCAAGA
GCAGACCGATGTCCTAGAGCTGGACGAGAAGCGCATTGTTGTTGTACGTA
TACACTACATACACTGTGGGACATGATTCACTTCCGGGCGTATGCTAATA
CCTGCTGGATGGGATAGTTGCCCGGCTCGTCCGACACCGCAGCTTCGTTC
CAATTCGAGGGAGAGGGTCACACTCTGGGCAATGCGCTGCGGTATGCGAT
TATGAAGAAGTGCGTACACATACTCTACTTTATTACAAACCCCTCTCTTC
TCTGTTATGTTGGATCTTGCTAACGAGTTTTCCTCGGGTTCAGCCCCGAA
GTCGAATTCTGCGGTTACACCATCCCCCATCCTTCCGAGACGAAGATGAA
CCTTCGTATTCAGACTTATGGTTTGTTCTTCCCGCCCTCCTACCTTCTTT
TCCGTCAGAATAAAGATCACCTGTATTAACGAATGAACAAACAGAAACTA
CCACCGCCGTCGAAGCCCTCGAGAAAGGTCTCGACACTCTAATGGACCTC
TGTGATGTCGTGACGGACAAGTTCACGACTGCCCGTGATGACTTTAATGC
TGCGCAGGCGGATCGCATGGAGGCTTAGGCATATATATACATATTATAGA
CTTTTGGGTGGTTTTTGGCTTTTGATCTGTGTGTGTGTCATGTTTTTGCT
GTTTGATGGGATATGATGGCGTTGTGTGTGTATAGAAAAGTTATACCTTT
TCCTTCTTCTTCTTTTCTTTTTCTCTTGGGGTGGTTAGATGTAATGGGGT
TTGTTGTGGGTGTATTGGTTGGTTGATTGGTTGGCTGGAGATGCAGTGGT
ACTTATTGATGGGGAGGGAGTGAGGGATACCATAGGTAGCATCTACTACT
ATATGCTCATAGATATCTGGGTTGGTCATGTGAATAGGGCTCTTTGTGAT
AGTCTAACCAAGAG
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Coding sequence (CDS) from alignment at KZ851907.1:650957..652220+

>M747DRAFT_276739-T1 ID=M747DRAFT_276739-T1|Name=M747DRAFT_276739-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1668bp|location=Sequence derived from alignment at KZ851907.1:650957..652220+ (Aspergillus niger ATCC 13496)
ATGCCTGCCTCCGTCCACTCCGAAGAACAAGACCAGTCCATGCTGGACGC
CTCCGCGCCTCAAGAGCAAGAGCAGACCGATGTCCTAGAGCTGGACGAGA
AGCGCATTGTTGTTTTGCCCGGCTCGTCCGACACCGCAGCTTCGTTCCAA
TTCGAGGGAGAGGGTCACACTCTGGGCAATGCGCTGCGGTATGCGATTAT
GAAGAACCCCGAAGTCGAATTCTGCGGTTACACCATCCCCCATCCTTCCG
AGACGAAGATGAACCTTCGTATTCAGACTTATGAAACTACCACCGCCGTC
GAAGCCCTCGAGAAAGGTCTCGACACTCTAATGGACCTCTGTGATGTCGT
GACGGACAAGTTCACGACTGCCCGTGATGACTTTAATGCTGCGCAGGCGG
ATCGCATGGAGGCTTAGATGCCTGCCTCCGTCCACTCCGAAGAACAAGAC
CAGTCCATGCTGGACGCCTCCGCGCCTCAAGAGCAAGAGCAGACCGATGT
CCTAGAGCTGGACGAGAAGCGCATTGTTGTTTTGCCCGGCTCGTCCGACA
CCGCAGCTTCGTTCCAATTCGAGGGAGAGGGTCACACTCTGGGCAATGCG
CTGCGGTATGCGATTATGAAGAACCCCGAAGTCGAATTCTGCGGTTACAC
CATCCCCCATCCTTCCGAGACGAAGATGAACCTTCGTATTCAGACTTATG
AAACTACCACCGCCGTCGAAGCCCTCGAGAAAGGTCTCGACACTCTAATG
GACCTCTGTGATGTCGTGACGGACAAGTTCACGACTGCCCGTGATGACTT
TAATGCTGCGCAGGCGGATCGCATGGAGGCTTAGATGCCTGCCTCCGTCC
ACTCCGAAGAACAAGACCAGTCCATGCTGGACGCCTCCGCGCCTCAAGAG
CAAGAGCAGACCGATGTCCTAGAGCTGGACGAGAAGCGCATTGTTGTTTT
GCCCGGCTCGTCCGACACCGCAGCTTCGTTCCAATTCGAGGGAGAGGGTC
ACACTCTGGGCAATGCGCTGCGGTATGCGATTATGAAGAACCCCGAAGTC
GAATTCTGCGGTTACACCATCCCCCATCCTTCCGAGACGAAGATGAACCT
TCGTATTCAGACTTATGAAACTACCACCGCCGTCGAAGCCCTCGAGAAAG
GTCTCGACACTCTAATGGACCTCTGTGATGTCGTGACGGACAAGTTCACG
ACTGCCCGTGATGACTTTAATGCTGCGCAGGCGGATCGCATGGAGGCTTA
GATGCCTGCCTCCGTCCACTCCGAAGAACAAGACCAGTCCATGCTGGACG
CCTCCGCGCCTCAAGAGCAAGAGCAGACCGATGTCCTAGAGCTGGACGAG
AAGCGCATTGTTGTTTTGCCCGGCTCGTCCGACACCGCAGCTTCGTTCCA
ATTCGAGGGAGAGGGTCACACTCTGGGCAATGCGCTGCGGTATGCGATTA
TGAAGAACCCCGAAGTCGAATTCTGCGGTTACACCATCCCCCATCCTTCC
GAGACGAAGATGAACCTTCGTATTCAGACTTATGAAACTACCACCGCCGT
CGAAGCCCTCGAGAAAGGTCTCGACACTCTAATGGACCTCTGTGATGTCG
TGACGGACAAGTTCACGACTGCCCGTGATGACTTTAATGCTGCGCAGGCG
GATCGCATGGAGGCTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003899DNA-directed 5'-3' RNA polymerase activity
GO:0003677DNA binding
GO:0046983protein dimerization activity
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPC19M747DRAFT_276739Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_276739-T1M747DRAFT_276739-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_276739-T1.utr5p1M747DRAFT_276739-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR
M747DRAFT_276739-T1.utr5p2M747DRAFT_276739-T1.utr5p2Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_276739-T1.exon1M747DRAFT_276739-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_276739-T1.exon2M747DRAFT_276739-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_276739-T1.exon3M747DRAFT_276739-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_276739-T1.exon4M747DRAFT_276739-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_276739-T1.exon5M747DRAFT_276739-T1.exon5Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_276739-T1.cdsM747DRAFT_276739-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_276739-T1.utr3p1M747DRAFT_276739-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR033898
DBxrefInterPro:IPR008193
DBxrefInterPro:IPR009025
DBxrefInterPro:IPR036603
DBxrefPFAM:PF13656
DBxrefPFAM:PF01193
ProductRNA polymerase subunit AC19
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851907.1supercontigKZ851907.1:650957..652220 +
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