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M747DRAFT_277190-T1, M747DRAFT_277190-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_277190-T1
Unique NameM747DRAFT_277190-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851908.1:529431..530941-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_277190-T1 ID=M747DRAFT_277190-T1|Name=M747DRAFT_277190-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1511bp|location=Sequence derived from alignment at KZ851908.1:529431..530941- (Aspergillus niger ATCC 13496)
CGGCCCCTTCGGAGTCCCATCTCCGACCTGCACGACATCAAACCTCATCT
TCACTCCGATTGCTAAAAGGGGTGTGTGTTGCCTGGATTCAGGCTGTTGC
TCCCCTCATCGATTCACCCTCCAGCGCTCCTGAACTAGTGGGTCGTATAC
CATACCAGCCACACATCCACACCCCCGGATGCCCAAAGCCAACTGGATAA
TCTGTACCCATCCAGCACCTCTTAGGCCCAAAGGGAAAAGCACTATGGTG
GCTATTGCTACCTCTTCTATACTAGATTAACCCCCACACGATACCCCCTT
CCCGCTAGACTCCCAACAATGGCTGCTAATTACTGGGCATCAACTCAACG
CCGACACTGGCTCTTCACGAGAGAGAAGTTGGCAGAGATTCGGGAGAACT
TTAGAGAGCGGGACATGGTCGCTCATAGTCAGTTTCCTCTGCCGGATCAG
AGGTTGCTGAACATCTACTTCAGTCAACGTAAGATAACATAGTATATATC
CTAAATCGGTGAGCATCCGAGCTCACCAGACCAACAGAACTCATCAAATT
GGGGAAACGGATGTCTACTCGACAACAAGCACTTGCGACAGCGCAAGTCT
ATGTCAAGAGGTTCTACACCAAGAACGAGATTAGACATACAAACCCGTAT
CTTGTCGTCACAACTGCCTTCTATCTGGCCTGTAAAATGGAAGAATGCCC
TCAACATATTCGTTTTGTCGTCGGAGAGGCTAGAGGTCTCTGGCCAGGTA
CGGAACACTCGCGTTAATGCACTTCGTGCGCTTCCCGCTGACGTGGCTAC
AGAGTTTATTGCCCCAGATGTTTCAAAACTAGGAGAATGCGAATTCTCTT
TGATATCGGAAATGAACTCTCAGCTTATTGTGCACCACCCATATCGAACT
TTATCAGAACTCCAACCCGAGCTGTCACTTACGTCAGATGAAGTTGCTCT
TGCATGGTCTGTAATCAACGACCACTATCTCACCGACTTGCCGCTCTTAT
ATCCGCCTCACGTCATCGCTGTCATGGCGATTATCGTCGCCGTGGTCTTC
AAGCCCAGCCAAACGAGCTTTCACGGGTCAGCAGCGCCACTGGCCAGCGC
GATGCGCGATGGGGGGATGAACATCCTTGGAGCATTGGGAGATAAGGGCG
GCAACGGCCCTCCTCCCCGCATTCAACGACTTATAGGATGGCTTGCCGAG
AGCGAGGTGGACATCAAGGCAGTCATAGAGTGTACTCAAGAGCTGGTGTC
GCTTTACGAGGTCTGGGAGCAATACAGCGAAAAGCATTGCAAGGAGCTTC
TTGGACGGATGGTGAAGAGCAAGAACCTGGACAAATGAACATACCATTTT
CATGCACATACATAGGATTTCAAGCGGCGTTCAACGGGGTCATGTTATTA
CGGAAGCATGTCATGCGCGAGCGATACTTATTTTTTTGGTCCATATTTCG
GGTTTCGGCTGGTTGCAGATTGTTTCAAAACTGTTGCATTATCGCATAGT
CTAAGCGGGTG
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Coding sequence (CDS) from alignment at KZ851908.1:529431..530941-

>M747DRAFT_277190-T1 ID=M747DRAFT_277190-T1|Name=M747DRAFT_277190-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2718bp|location=Sequence derived from alignment at KZ851908.1:529431..530941- (Aspergillus niger ATCC 13496)
AGTTTATTGCCCCAGATGTTTCAAAACTAGGAGAATGCGAATTCTCTTTG
ATATCGGAAATGAACTCTCAGCTTATTGTGCACCACCCATATCGAACTTT
ATCAGAACTCCAACCCGAGCTGTCACTTACGTCAGATGAAGTTGCTCTTG
CATGGTCTGTAATCAACGACCACTATCTCACCGACTTGCCGCTCTTATAT
CCGCCTCACGTCATCGCTGTCATGGCGATTATCGTCGCCGTGGTCTTCAA
GCCCAGCCAAACGAGCTTTCACGGGTCAGCAGCGCCACTGGCCAGCGCGA
TGCGCGATGGGGGGATGAACATCCTTGGAGCATTGGGAGATAAGGGCGGC
AACGGCCCTCCTCCCCGCATTCAACGACTTATAGGATGGCTTGCCGAGAG
CGAGGTGGACATCAAGGCAGTCATAGAGTGTACTCAAGAGCTGGTGTCGC
TTTACGAGGTCTGGGAGCAATACAGCGAAAAGCATTGCAAGGAGCTTCTT
GGACGGATGGTGAAGAGCAAGAACCTGGACAAATGAAACTCATCAAATTG
GGGAAACGGATGTCTACTCGACAACAAGCACTTGCGACAGCGCAAGTCTA
TGTCAAGAGGTTCTACACCAAGAACGAGATTAGACATACAAACCCGTATC
TTGTCGTCACAACTGCCTTCTATCTGGCCTGTAAAATGGAAGAATGCCCT
CAACATATTCGTTTTGTCGTCGGAGAGGCTAGAGGTCTCTGGCCAGATGG
CTGCTAATTACTGGGCATCAACTCAACGCCGACACTGGCTCTTCACGAGA
GAGAAGTTGGCAGAGATTCGGGAGAACTTTAGAGAGCGGGACATGGTCGC
TCATAGTCAGTTTCCTCTGCCGGATCAGAGGTTGCTGAACATCTACTTCA
GTCAACAGTTTATTGCCCCAGATGTTTCAAAACTAGGAGAATGCGAATTC
TCTTTGATATCGGAAATGAACTCTCAGCTTATTGTGCACCACCCATATCG
AACTTTATCAGAACTCCAACCCGAGCTGTCACTTACGTCAGATGAAGTTG
CTCTTGCATGGTCTGTAATCAACGACCACTATCTCACCGACTTGCCGCTC
TTATATCCGCCTCACGTCATCGCTGTCATGGCGATTATCGTCGCCGTGGT
CTTCAAGCCCAGCCAAACGAGCTTTCACGGGTCAGCAGCGCCACTGGCCA
GCGCGATGCGCGATGGGGGGATGAACATCCTTGGAGCATTGGGAGATAAG
GGCGGCAACGGCCCTCCTCCCCGCATTCAACGACTTATAGGATGGCTTGC
CGAGAGCGAGGTGGACATCAAGGCAGTCATAGAGTGTACTCAAGAGCTGG
TGTCGCTTTACGAGGTCTGGGAGCAATACAGCGAAAAGCATTGCAAGGAG
CTTCTTGGACGGATGGTGAAGAGCAAGAACCTGGACAAATGAAACTCATC
AAATTGGGGAAACGGATGTCTACTCGACAACAAGCACTTGCGACAGCGCA
AGTCTATGTCAAGAGGTTCTACACCAAGAACGAGATTAGACATACAAACC
CGTATCTTGTCGTCACAACTGCCTTCTATCTGGCCTGTAAAATGGAAGAA
TGCCCTCAACATATTCGTTTTGTCGTCGGAGAGGCTAGAGGTCTCTGGCC
AGATGGCTGCTAATTACTGGGCATCAACTCAACGCCGACACTGGCTCTTC
ACGAGAGAGAAGTTGGCAGAGATTCGGGAGAACTTTAGAGAGCGGGACAT
GGTCGCTCATAGTCAGTTTCCTCTGCCGGATCAGAGGTTGCTGAACATCT
ACTTCAGTCAACAGTTTATTGCCCCAGATGTTTCAAAACTAGGAGAATGC
GAATTCTCTTTGATATCGGAAATGAACTCTCAGCTTATTGTGCACCACCC
ATATCGAACTTTATCAGAACTCCAACCCGAGCTGTCACTTACGTCAGATG
AAGTTGCTCTTGCATGGTCTGTAATCAACGACCACTATCTCACCGACTTG
CCGCTCTTATATCCGCCTCACGTCATCGCTGTCATGGCGATTATCGTCGC
CGTGGTCTTCAAGCCCAGCCAAACGAGCTTTCACGGGTCAGCAGCGCCAC
TGGCCAGCGCGATGCGCGATGGGGGGATGAACATCCTTGGAGCATTGGGA
GATAAGGGCGGCAACGGCCCTCCTCCCCGCATTCAACGACTTATAGGATG
GCTTGCCGAGAGCGAGGTGGACATCAAGGCAGTCATAGAGTGTACTCAAG
AGCTGGTGTCGCTTTACGAGGTCTGGGAGCAATACAGCGAAAAGCATTGC
AAGGAGCTTCTTGGACGGATGGTGAAGAGCAAGAACCTGGACAAATGAAA
CTCATCAAATTGGGGAAACGGATGTCTACTCGACAACAAGCACTTGCGAC
AGCGCAAGTCTATGTCAAGAGGTTCTACACCAAGAACGAGATTAGACATA
CAAACCCGTATCTTGTCGTCACAACTGCCTTCTATCTGGCCTGTAAAATG
GAAGAATGCCCTCAACATATTCGTTTTGTCGTCGGAGAGGCTAGAGGTCT
CTGGCCAGATGGCTGCTAATTACTGGGCATCAACTCAACGCCGACACTGG
CTCTTCACGAGAGAGAAGTTGGCAGAGATTCGGGAGAACTTTAGAGAGCG
GGACATGGTCGCTCATAGTCAGTTTCCTCTGCCGGATCAGAGGTTGCTGA
ACATCTACTTCAGTCAAC
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SSN8M747DRAFT_277190Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_277190-T1M747DRAFT_277190-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_277190-T1.cdsM747DRAFT_277190-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_277190-T1.utr3p1M747DRAFT_277190-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_277190-T1.exon3M747DRAFT_277190-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_277190-T1.exon2M747DRAFT_277190-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_277190-T1.exon1M747DRAFT_277190-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_277190-T1.utr5p1M747DRAFT_277190-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09262K8C
DBxrefInterPro:IPR036915
DBxrefInterPro:IPR006671
DBxrefInterPro:IPR013763
DBxrefPFAM:PF00134
ProductRNA polymerase II holoenzyme cyclin-like subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851908.1supercontigKZ851908.1:529431..530941 -
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