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M747DRAFT_277199-T1, M747DRAFT_277199-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_277199-T1
Unique NameM747DRAFT_277199-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851908.1:539903..542989+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_277199-T1 ID=M747DRAFT_277199-T1|Name=M747DRAFT_277199-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=3087bp|location=Sequence derived from alignment at KZ851908.1:539903..542989+ (Aspergillus niger ATCC 13496)
CGGTGATGAGGCATCTTCCCTGGAGGCGCTCGGATCCAGATGAGATTGGC
CCGGATAAAGCCTGGCCTCAATAGTGCTAACATTGATGTCTGACAGTCAT
CTAGATTCAATCCTGAGCCATTCTTTCTACGCCGCATCTCTTGCGCGACG
CGCCGCGGCTTTACTGCGTTGAACAACGCGGTGACCCGTGCCTTTCCTTT
TAGAGTGGCTTGTTCTAGGGTAACTTCTTCACATGTGTCGATACGAACTT
CTTGGATGTGGACTTCTATACTGGCAGCGTCATAAAACCAGAAAAGATAA
GGATCATTCCTTGAGGTTTGTGCTTTACCCTCGTGCTTTTGGGCCTGTCT
AGATATCTGACTTTATCGTCTCCAGAGAGATCCGCGCACAATGCTCCACG
AGATCCTCCTCTCCCTCTCGGGTCAGCCATCGCCTCTTTTCAATCCAGAG
ACTGAAGGAGGTGCTATCTCTGAAGATGCCTTTCCCTTGGTTTCCCCTCC
GGAGAAAGCCCTCCTCGCCTCTCTTGCCCATCTGAGCCGCCTCCATACCG
ACCTACGAACACATACTGCCTTAATTTCTTCGTCCCACCCTTCTGTTATC
TGTCGTGCAGTCTCGACGGCGATCAGTTCACGTCACCTGGGTGAATTCCA
GAGGAAAATCTTAGAAGTGGAGAAATCGATTCTGGTTGAGGATAGTGGAT
ACGTGGGCGGTTACGGAATTGTGCCATTGTCGACGATTGTTGGCGAATTT
TCTCCATGGACGCGACGATTGGAATGGCTGTGGGAGACCGTAAGGTTAAT
ATGGCCCATATACTCGCGGAATAAAGACCAGCTTTGCACTGGCGTGGCTC
TGATCGATCACCTTCGGGCGGAAACGCAAACAGGGTACGTTGACCTGAAA
GACATAGCTTTGCATTTGGTTGGTATTGCAGAGACTGCTTGGATGAGGCA
ATTGTCCCCCTGGCTGCTGTACGGAAATCTCCCCATCCTCGGTGGGTCCG
ACTTCTTCATACAACGCGAAAATGCAAGCCATGATCGGCCGCCCACTGCC
ACGCAGTTCATCGTGCATTCAGAGCTCCTGCCTCAGTTTGTAACAGCTCA
TACGGCCTCATCTATCTTATTCATCGGGAAGACGTTGAATCTCATTAGAG
CAAAGCGCAATGCACCTGCTGCGAACCCCTCTGCTGGGTTATCGACTACT
TCGGTCACACTACACACGGAGCATATAGAACAGCTTGCTGCATTGAAATC
ACCTATATCAGCGTCGAGACTGTCAAGTGCTGTGAATGCCATCCGGCTCT
CTCTGTCGCAAAGCACGCTCTCCAAGATTTTCCCATTACCCAAGGTCCTC
GAAGTCCTCTCGGTTCTCCATGATTTTCTGTTACTCCGACGGGGCGAATT
TGCGACGGCATTGGTATCTCATGCTGATACCCGCATTCAAGAGAGGTATC
GGAAACACGGGCATTCAGCCTCCAGGTATAAAACTTTAGAAGATCTAAAG
GGCCTTTCTATTAAGGAAGGAGATGTAGTGACTGCTCTGTCACAAACGCT
CTCAGAGCTCTACTCTCTGCAAACAGAAGACGATCCCGCAGACGATGAAC
TCGATTTAGCAAAGGAGCTGCTTCGGCTGTCGATCAAGCAGGATGTGGAT
AACAACCCCGCGCTGTCTCCCGACATTGCTGGATCAGATATGAATGCCAG
AATTTCGGACGTCGCTTTCGACGACCTTCTTTTCCCCACTCCAACATGTC
TTTCGGTCCACGTCCGCTCGCCCCTCGATTTGTTTCTTTCCGCCTCTGAT
ATATCGGTCTACTCGAAGATTCACTCTTACATTCTCGGTATCCGACGCGC
CCAGATGCATTTGGGCGACTTGTGGAAGCATACATTCCTTCGAAAGATCC
ATCCGTCTCCATGGGGTCCGCCTCGCAGCAGCACCCCTTACGGCCAGAGT
AGACTCAACCTCGGCAGACAAAGAGACAACATCAGGACTCGGCAGATGAG
GCCAATCTGGGCAACGAGCAGTGCCTCCCTCTTTGTACTGTCAGAAATAG
GAAGCTACTTCCAGGGAGAAGTTCTCAATGGCAACTGGCAACATTTTCGA
GAATGGATCGAAGGTGGATCTCCAACAACGGGCTCACGGCCTGGAACCGC
TTCCTCCGCTAATAGTAAGCGCACCGATAATTTTCAGGGCATTGACGACC
CGGCCGATTCTGGTTCCGGAGGTGATAGTCAGACGGTCCAACGGCATGAC
CCTGAAACATTGACCGCGGCGCATCGTCGCTATCTCTTTTCTCTTGTTGA
ATCGCTTTTCCTCACGGACATACCCTTTACCAAAGCCCTCCGATCCTTAC
TGACGAGTGTGGAACACTTTATTGCGCTAGTAGTTCGACTGGAAAGCATA
CAGCGCAACATGGACCTTGAGACCGATGAGGGCGTTGTCGATGCTTTAGT
AGACTATGCAGGGGAAGAGAGGGGGGTATGGCAATCACTCGGTGTTGCGC
GGGCTAGTGTCGAAGCAGGAATCAAGGATGCTGTGGCACGCCTGCGAGAC
ATTGATGACAGCCGATCTGGAGAGGGGCGGCAGATGCTTGATTTTGTGAG
GGACTCTCGTGAAAACGGGTCGCTTCAAGCCAATGGCTCTGCGACCGAGC
CCGGCTCTTTCCACTATGTGCCTCGGAAAGCGGCTGGTGTTGACCGTCTG
CTCATGAAGCTGGAATTCGGCAATGCTAATGGAGGCATGGGACTTGGAGT
CACTGCTGCAGGTACTTTCGGTGAAATGGCATAATTAGAAGGCTGTTCAT
TGCTGGCACATTGCATATAGGTGGTCGAGCCGTGGCTGGCTAATGAGCAG
CGAAGACAGATTATGACTGTCATGTCACGTTATGATTTATGAATAGCATG
GCTTTACGGTGTAAGAAAGTGGCTATGGATAGGCTTCTGTCTGTAATGTG
TTCTGTTCTAGGCCCATGTGCTCTGCCAGGAGGAACGTGACCTCGGGCGA
GATCTGCTTGCCTATTGCCGCCAGTGCGTAAACATACGTACTTAGTTCCA
CGCGTCCTCTTCCTCCCAAGCAAAGGCGCCCAAAGAC
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Coding sequence (CDS) from alignment at KZ851908.1:539903..542989+

>M747DRAFT_277199-T1 ID=M747DRAFT_277199-T1|Name=M747DRAFT_277199-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2394bp|location=Sequence derived from alignment at KZ851908.1:539903..542989+ (Aspergillus niger ATCC 13496)
ATGCTCCACGAGATCCTCCTCTCCCTCTCGGGTCAGCCATCGCCTCTTTT
CAATCCAGAGACTGAAGGAGGTGCTATCTCTGAAGATGCCTTTCCCTTGG
TTTCCCCTCCGGAGAAAGCCCTCCTCGCCTCTCTTGCCCATCTGAGCCGC
CTCCATACCGACCTACGAACACATACTGCCTTAATTTCTTCGTCCCACCC
TTCTGTTATCTGTCGTGCAGTCTCGACGGCGATCAGTTCACGTCACCTGG
GTGAATTCCAGAGGAAAATCTTAGAAGTGGAGAAATCGATTCTGGTTGAG
GATAGTGGATACGTGGGCGGTTACGGAATTGTGCCATTGTCGACGATTGT
TGGCGAATTTTCTCCATGGACGCGACGATTGGAATGGCTGTGGGAGACCG
TAAGGTTAATATGGCCCATATACTCGCGGAATAAAGACCAGCTTTGCACT
GGCGTGGCTCTGATCGATCACCTTCGGGCGGAAACGCAAACAGGGTACGT
TGACCTGAAAGACATAGCTTTGCATTTGGTTGGTATTGCAGAGACTGCTT
GGATGAGGCAATTGTCCCCCTGGCTGCTGTACGGAAATCTCCCCATCCTC
GGTGGGTCCGACTTCTTCATACAACGCGAAAATGCAAGCCATGATCGGCC
GCCCACTGCCACGCAGTTCATCGTGCATTCAGAGCTCCTGCCTCAGTTTG
TAACAGCTCATACGGCCTCATCTATCTTATTCATCGGGAAGACGTTGAAT
CTCATTAGAGCAAAGCGCAATGCACCTGCTGCGAACCCCTCTGCTGGGTT
ATCGACTACTTCGGTCACACTACACACGGAGCATATAGAACAGCTTGCTG
CATTGAAATCACCTATATCAGCGTCGAGACTGTCAAGTGCTGTGAATGCC
ATCCGGCTCTCTCTGTCGCAAAGCACGCTCTCCAAGATTTTCCCATTACC
CAAGGTCCTCGAAGTCCTCTCGGTTCTCCATGATTTTCTGTTACTCCGAC
GGGGCGAATTTGCGACGGCATTGGTATCTCATGCTGATACCCGCATTCAA
GAGAGGTATCGGAAACACGGGCATTCAGCCTCCAGGTATAAAACTTTAGA
AGATCTAAAGGGCCTTTCTATTAAGGAAGGAGATGTAGTGACTGCTCTGT
CACAAACGCTCTCAGAGCTCTACTCTCTGCAAACAGAAGACGATCCCGCA
GACGATGAACTCGATTTAGCAAAGGAGCTGCTTCGGCTGTCGATCAAGCA
GGATGTGGATAACAACCCCGCGCTGTCTCCCGACATTGCTGGATCAGATA
TGAATGCCAGAATTTCGGACGTCGCTTTCGACGACCTTCTTTTCCCCACT
CCAACATGTCTTTCGGTCCACGTCCGCTCGCCCCTCGATTTGTTTCTTTC
CGCCTCTGATATATCGGTCTACTCGAAGATTCACTCTTACATTCTCGGTA
TCCGACGCGCCCAGATGCATTTGGGCGACTTGTGGAAGCATACATTCCTT
CGAAAGATCCATCCGTCTCCATGGGGTCCGCCTCGCAGCAGCACCCCTTA
CGGCCAGAGTAGACTCAACCTCGGCAGACAAAGAGACAACATCAGGACTC
GGCAGATGAGGCCAATCTGGGCAACGAGCAGTGCCTCCCTCTTTGTACTG
TCAGAAATAGGAAGCTACTTCCAGGGAGAAGTTCTCAATGGCAACTGGCA
ACATTTTCGAGAATGGATCGAAGGTGGATCTCCAACAACGGGCTCACGGC
CTGGAACCGCTTCCTCCGCTAATAGTAAGCGCACCGATAATTTTCAGGGC
ATTGACGACCCGGCCGATTCTGGTTCCGGAGGTGATAGTCAGACGGTCCA
ACGGCATGACCCTGAAACATTGACCGCGGCGCATCGTCGCTATCTCTTTT
CTCTTGTTGAATCGCTTTTCCTCACGGACATACCCTTTACCAAAGCCCTC
CGATCCTTACTGACGAGTGTGGAACACTTTATTGCGCTAGTAGTTCGACT
GGAAAGCATACAGCGCAACATGGACCTTGAGACCGATGAGGGCGTTGTCG
ATGCTTTAGTAGACTATGCAGGGGAAGAGAGGGGGGTATGGCAATCACTC
GGTGTTGCGCGGGCTAGTGTCGAAGCAGGAATCAAGGATGCTGTGGCACG
CCTGCGAGACATTGATGACAGCCGATCTGGAGAGGGGCGGCAGATGCTTG
ATTTTGTGAGGGACTCTCGTGAAAACGGGTCGCTTCAAGCCAATGGCTCT
GCGACCGAGCCCGGCTCTTTCCACTATGTGCCTCGGAAAGCGGCTGGTGT
TGACCGTCTGCTCATGAAGCTGGAATTCGGCAATGCTAATGGAGGCATGG
GACTTGGAGTCACTGCTGCAGGTACTTTCGGTGAAATGGCATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0043015gamma-tubulin binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_277199M747DRAFT_277199Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_277199-T1M747DRAFT_277199-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_277199-T1.utr5p1M747DRAFT_277199-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR
M747DRAFT_277199-T1.utr5p2M747DRAFT_277199-T1.utr5p2Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_277199-T1.exon1M747DRAFT_277199-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_277199-T1.exon2M747DRAFT_277199-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_277199-T1.cdsM747DRAFT_277199-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_277199-T1.utr3p1M747DRAFT_277199-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR041470
DBxrefInterPro:IPR040457
DBxrefPFAM:PF17681
DBxrefPFAM:PF04130
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851908.1supercontigKZ851908.1:539903..542989 +
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