You are here

Home

M747DRAFT_277656-T1, M747DRAFT_277656-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_277656-T1
Unique NameM747DRAFT_277656-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851909.1:659520..661220+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_277656-T1 ID=M747DRAFT_277656-T1|Name=M747DRAFT_277656-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1701bp|location=Sequence derived from alignment at KZ851909.1:659520..661220+ (Aspergillus niger ATCC 13496)
CCGTAGAATAATCCCATTGGCCTCCATTGGGGAGGGATATTGTCCCTTCC
ATTCCCAACCACTCGCTGCTGCTATTGTCATACTGCGAGTCATCACTTTC
CTAACGTTGGCCAGCTTGTCTGTAGCGGAAATTGACGCCATGCTTCGGAG
TTAACGATGGGCCTTTGACTCAACAGTCTGCTCGTCCTGGCTGTCTGTTT
CTCCCATATATAGTAGAGAGCGCGCAGCTTCTATCAAATACATTACAAAC
ACGGAGCATCATACAATCCAGAGCAAGCCAGTCACAATGCCAGGCGAAAC
CAATATACCCCCTCGTCGAGACAGACATGTCTCCAAAGTCCACATCGCCG
ACACCCCCATCACCCTCCGGAACTGGCACAAACATGTCAACTGGCTGAAC
GTGACCATGATCGTCCTGATCCCCCTCTACGGCTGCATCCAAGCTCTCTG
GACACCTCTACGACTAAAAACCGCCATCTGGGCAGTAGCATACTACTTCT
TCACAGCCCTAGGCGTCACAGCAGGTCTGTCCCACCACCACCATACCCCC
CTCTCACATCCCCTCTTCTAACCCATCGTAACCAAAAGGCTACCACCGCC
TCTGGGCCCACAGATCCTACACAGCAACCCTCCCCCTCCGCATCACCCTG
GCCCTCGCCGCCGGGGGCTCCGTCCAAGGTTCCGCACGCTGGTGGGCACG
CCTGCACCGCTCGCACCACCGGTACACAGACACGGAGCGGGACCCTTACT
CCGTACACAAGGGCATCTTCTACGCGCACTTCGGCTGGATGATACTGAAG
CAGAACCCGAAGCGGTTCGGCCGAACCGACATCTCCGATCTCAACGCCGA
CCCCGTGGTCGTCTGGCAGCATCGACACTTCCTGAAGATCGTGGTCCTCA
TGGGGCTTGTCGTTCCGATGCTCGTCGCAGGCATCTGGGGTGATTGGTGG
GGCGGGTTCGTGTACGCGGGCATCCTGCGCATCTTCTTCGTGCAGCAGGC
CACTTTCTGCGTGAACTCTCTGGCTCACTGGCTCGGCGAGCAGCCGTTCG
ATGATCGCAATTCACCCCGTGATCATGTCGTCACGGCGTTGGCGACGATG
GGTGAGGGGTATCATAATTTTCATCACGAGTTTCCGTCAGATTATCGCAA
TGCTATTCGGTGGTATCAGTATGATCCGACCAAGTGGGCCATTTGGTGCT
GGGGACAGATGGGGTTGGCGCGTGATTTGAAGATGTTTCGCGAGAATGAG
ATTGAGAAGGGGAGGGTGCAGCAGTTACAGAAGAAGGTGGATAAGAAACG
GGCAGAGTTGGATTGGGGGACTCCGTTGAGTGAGTTGCCGGTTATGGAGT
GGGAGGAGTTTGTCGAGAGGGCGAGGAGCAGGGCGTTAGTCGTTGTTGCT
GGGGTGGTGCATGATGTTGAGGACTTCGTAAAGGAACATCCTGGTGGGAG
GGCTATGATCCAGGCTGGTGTTGGGAAGGATGCGACCGCTATGTTTAATG
GTGGGGTGTATTATCATTCGAATGCGGCGCATAATCTGCTGTCGATGATG
CGGGTGGCAGTTATTCGGGGTGGGAGTGAGGTGGAGATTTGGAAGAGGCC
GCAGAAGGAGATGTAGATTAGTTGCATGGCTTATGGGTGTCTTGTTCTGA
ATTTTTCTGATAGACAGATATGGTAGGGTTTGTCCCAATTAGGAAAGCCG
G
back to top

Coding sequence (CDS) from alignment at KZ851909.1:659520..661220+

>M747DRAFT_277656-T1 ID=M747DRAFT_277656-T1|Name=M747DRAFT_277656-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2532bp|location=Sequence derived from alignment at KZ851909.1:659520..661220+ (Aspergillus niger ATCC 13496)
ATGCCAGGCGAAACCAATATACCCCCTCGTCGAGACAGACATGTCTCCAA
AGTCCACATCGCCGACACCCCCATCACCCTCCGGAACTGGCACAAACATG
TCAACTGGCTGAACGTGACCATGATCGTCCTGATCCCCCTCTACGGCTGC
ATCCAAGCTCTCTGGACACCTCTACGACTAAAAACCGCCATCTGGGCAGT
AGCATACTACTTCTTCACAGCCCTAGGCGTCACAGCAGGCTACCACCGCC
TCTGGGCCCACAGATCCTACACAGCAACCCTCCCCCTCCGCATCACCCTG
GCCCTCGCCGCCGGGGGCTCCGTCCAAGGTTCCGCACGCTGGTGGGCACG
CCTGCACCGCTCGCACCACCGGTACACAGACACGGAGCGGGACCCTTACT
CCGTACACAAGGGCATCTTCTACGCGCACTTCGGCTGGATGATACTGAAG
CAGAACCCGAAGCGGTTCGGCCGAACCGACATCTCCGATCTCAACGCCGA
CCCCGTGGTCGTCTGGCAGCATCGACACTTCCTGAAGATCGTGGTCCTCA
TGGGGCTTGTCGTTCCGATGCTCGTCGCAGGCATCTGGGGTGATTGGTGG
GGCGGGTTCGTGTACGCGGGCATCCTGCGCATCTTCTTCGTGCAGCAGGC
CACTTTCTGCGTGAACTCTCTGGCTCACTGGCTCGGCGAGCAGCCGTTCG
ATGATCGCAATTCACCCCGTGATCATGTCGTCACGGCGTTGGCGACGATG
GGTGAGGGGTATCATAATTTTCATCACGAGTTTCCGTCAGATTATCGCAA
TGCTATTCGGTGGTATCAGTATGATCCGACCAAGTGGGCCATTTGGTGCT
GGGGACAGATGGGGTTGGCGCGTGATTTGAAGATGTTTCGCGAGAATGAG
ATTGAGAAGGGGAGGGTGCAGCAGTTACAGAAGAAGGTGGATAAGAAACG
GGCAGAGTTGGATTGGGGGACTCCGTTGAGTGAGTTGCCGGTTATGGAGT
GGGAGGAGTTTGTCGAGAGGGCGAGGAGCAGGGCGTTAGTCGTTGTTGCT
GGGGTGGTGCATGATGTTGAGGACTTCGTAAAGGAACATCCTGGTGGGAG
GGCTATGATCCAGGCTGGTGTTGGGAAGGATGCGACCGCTATGTTTAATG
GTGGGGTGTATTATCATTCGAATGCGGCGCATAATCTGCTGTCGATGATG
CGGGTGGCAGTTATTCGGGGTGGGAGTGAGGTGGAGATTTGGAAGAGGCC
GCAGAAGGAGATGTAGATGCCAGGCGAAACCAATATACCCCCTCGTCGAG
ACAGACATGTCTCCAAAGTCCACATCGCCGACACCCCCATCACCCTCCGG
AACTGGCACAAACATGTCAACTGGCTGAACGTGACCATGATCGTCCTGAT
CCCCCTCTACGGCTGCATCCAAGCTCTCTGGACACCTCTACGACTAAAAA
CCGCCATCTGGGCAGTAGCATACTACTTCTTCACAGCCCTAGGCGTCACA
GCAGGCTACCACCGCCTCTGGGCCCACAGATCCTACACAGCAACCCTCCC
CCTCCGCATCACCCTGGCCCTCGCCGCCGGGGGCTCCGTCCAAGGTTCCG
CACGCTGGTGGGCACGCCTGCACCGCTCGCACCACCGGTACACAGACACG
GAGCGGGACCCTTACTCCGTACACAAGGGCATCTTCTACGCGCACTTCGG
CTGGATGATACTGAAGCAGAACCCGAAGCGGTTCGGCCGAACCGACATCT
CCGATCTCAACGCCGACCCCGTGGTCGTCTGGCAGCATCGACACTTCCTG
AAGATCGTGGTCCTCATGGGGCTTGTCGTTCCGATGCTCGTCGCAGGCAT
CTGGGGTGATTGGTGGGGCGGGTTCGTGTACGCGGGCATCCTGCGCATCT
TCTTCGTGCAGCAGGCCACTTTCTGCGTGAACTCTCTGGCTCACTGGCTC
GGCGAGCAGCCGTTCGATGATCGCAATTCACCCCGTGATCATGTCGTCAC
GGCGTTGGCGACGATGGGTGAGGGGTATCATAATTTTCATCACGAGTTTC
CGTCAGATTATCGCAATGCTATTCGGTGGTATCAGTATGATCCGACCAAG
TGGGCCATTTGGTGCTGGGGACAGATGGGGTTGGCGCGTGATTTGAAGAT
GTTTCGCGAGAATGAGATTGAGAAGGGGAGGGTGCAGCAGTTACAGAAGA
AGGTGGATAAGAAACGGGCAGAGTTGGATTGGGGGACTCCGTTGAGTGAG
TTGCCGGTTATGGAGTGGGAGGAGTTTGTCGAGAGGGCGAGGAGCAGGGC
GTTAGTCGTTGTTGCTGGGGTGGTGCATGATGTTGAGGACTTCGTAAAGG
AACATCCTGGTGGGAGGGCTATGATCCAGGCTGGTGTTGGGAAGGATGCG
ACCGCTATGTTTAATGGTGGGGTGTATTATCATTCGAATGCGGCGCATAA
TCTGCTGTCGATGATGCGGGTGGCAGTTATTCGGGGTGGGAGTGAGGTGG
AGATTTGGAAGAGGCCGCAGAAGGAGATGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0006636unsaturated fatty acid biosynthetic process
GO:0006629lipid metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0020037heme binding
GO:0004768stearoyl-CoA 9-desaturase activity
GO:0016717oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
OLE1_2M747DRAFT_277656Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_277656-T1.utr5p1M747DRAFT_277656-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_277656-T1.exon1M747DRAFT_277656-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_277656-T1.exon2M747DRAFT_277656-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_277656-T1.cdsM747DRAFT_277656-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_277656-T1.utr3p1M747DRAFT_277656-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_277656-T1M747DRAFT_277656-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR001522
DBxrefInterPro:IPR018506
DBxrefInterPro:IPR036400
DBxrefInterPro:IPR009160
DBxrefInterPro:IPR005804
DBxrefInterPro:IPR001199
DBxrefInterPro:IPR015876
DBxrefPFAM:PF00487
DBxrefPFAM:PF00173
Productstearoyl-CoA 9-desaturase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851909.1supercontigKZ851909.1:659520..661220 +
Powered by Drupal