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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851910.1:35571..37167- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_277854-T1 ID=M747DRAFT_277854-T1|Name=M747DRAFT_277854-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1597bp|location=Sequence derived from alignment at KZ851910.1:35571..37167- (Aspergillus niger ATCC 13496)
GTCGAATTAACGGGTGACTGCCCCTTCTTCTGTCCGATCTTGTTTGAAGG
CAGGGTTCATCTGCTGCAATTGTTCTGTTCTGCGCTCTTTATTCTGAACG
TGCGCTCCCTGCTTCTGTTGACTCGCTGAATCAGTTTTCTGGTCTTTCCC
AGTCGTTGATATCTTGTCATCGAGTGTTGGCGGCAAGGGCTCGTCCATTT
GTCGCAAATCTAGTTCATCGCTTCACTCATTCATAGCGATTCGACTTACT
CTGGACTAACGACACGGGCCACTGGAAATATTCGAACCGCACGCATCCAA
TCCCCGGGAAACAGTAAGATACTAGCTGAAGCTTGATCAATCGCGTGAAT
CGCACACCCCCCGCGCACCGGCTGTTGAAACGAAATTTTGTATCATACTA
TCGACGATCGCAAGTGTACGACATGTTTTTCCTTAAAGAAGAGGTCAAGG
TCATCACCTTGCACCCGTCCTACTTCGGGCCCAACATGCGCGAGTATCTC
ATCAACCGGTTAAACGAGGAGGAGGAAGGACGTTGTACGGGCGACCACTT
CGTAATCTGTGTGATGGACATGGTTGATATTGGCGAAGGACGGGTGCTCC
CAGGCAGCGGACAGGCAGAATATACTATCAAGTATCGGGCAATCATCTGG
AAGCCCTTCCGCGGAGAGACCGTACGTCTTGGAGTTGCATTGAACAGGGC
TGCATTTGATTCTGACCATAGCCTTGTAGGTCGATGCGATTGTTACGTCT
GTCAAGCCCACCGGTATATTTACTTTGGCCGGTCCATTGTCTGTTTTTAT
TGCACGGAAAGTATGTCAACGACCGAGTTTGAGTTGGATCACTTAGCCTT
ATCGGTTGCTAACGAGTTGGCAAGAACATTCCTTCCGACATCAAGTGGGA
ACCGAACACAGTACCGCCGCAATATACGGACCATGCGGACCAAGTCATCG
AGAAGGGAACCAGTTTACGGCTTAAGATTCTTGGTGTGAAGCCCGACGTT
GCGGCGATCAATGCCATTGGAACGATCAAGGAAGATTATCTCGGGTGAGT
CTCCCAAACCTCTCTGGGAATTGGTGTCCAACACAGATGTACTGACATTC
TATTTTTCTTTCCTTTCCAGACCATTGTAATGCCTTTTGTGATGTGCCGT
TTACCTCCCCCATTTATACTAATGATTGATATCGCGTGACTGAGAGGATC
GTTGATATCCTGCCTAACTATACAATTTCTAACACAAGAACAACCATGTT
GAAAGAAATCTGCCTTGCAAGGAGGTGCGCCCATGGGTAGAATGATGAGA
GCGCGCCCAAGGCAGAGTCTTGGGCGTGGATATCATCCACCGGCATGATA
TCGTGGCTTTTACTTTGCAGAAACCCGCGCAGGCGAACGGGGCTGACTGA
TTGCTGCGAAACCAGGCACTAACTGCACCTGAGAGAAAACCCACGACCGG
GAAGGCATAGGTTTCCCCATGCCAGTTAGGAGGATAGCTATATGTCTGTA
TATCTAAGGCGGAAAATTCCGAATTTGGCTTGCCGGACTGAGGGTCTAAA
ATAAAAGAAAGAAAGAAAGAACTAATTCATAGATGAAAGACGACGAG back to topCoding sequence (CDS) from alignment at KZ851910.1:35571..37167- >M747DRAFT_277854-T1 ID=M747DRAFT_277854-T1|Name=M747DRAFT_277854-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2040bp|location=Sequence derived from alignment at KZ851910.1:35571..37167- (Aspergillus niger ATCC 13496)
ACCATTGTAAAACATTCCTTCCGACATCAAGTGGGAACCGAACACAGTAC
CGCCGCAATATACGGACCATGCGGACCAAGTCATCGAGAAGGGAACCAGT
TTACGGCTTAAGATTCTTGGTGTGAAGCCCGACGTTGCGGCGATCAATGC
CATTGGAACGATCAAGGAAGATTATCTCGGGTCGATGCGATTGTTACGTC
TGTCAAGCCCACCGGTATATTTACTTTGGCCGGTCCATTGTCTGTTTTTA
TTGCACGGAAAATGTTTTTCCTTAAAGAAGAGGTCAAGGTCATCACCTTG
CACCCGTCCTACTTCGGGCCCAACATGCGCGAGTATCTCATCAACCGGTT
AAACGAGGAGGAGGAAGGACGTTGTACGGGCGACCACTTCGTAATCTGTG
TGATGGACATGGTTGATATTGGCGAAGGACGGGTGCTCCCAGGCAGCGGA
CAGGCAGAATATACTATCAAGTATCGGGCAATCATCTGGAAGCCCTTCCG
CGGAGAGACCACCATTGTAAAACATTCCTTCCGACATCAAGTGGGAACCG
AACACAGTACCGCCGCAATATACGGACCATGCGGACCAAGTCATCGAGAA
GGGAACCAGTTTACGGCTTAAGATTCTTGGTGTGAAGCCCGACGTTGCGG
CGATCAATGCCATTGGAACGATCAAGGAAGATTATCTCGGGTCGATGCGA
TTGTTACGTCTGTCAAGCCCACCGGTATATTTACTTTGGCCGGTCCATTG
TCTGTTTTTATTGCACGGAAAATGTTTTTCCTTAAAGAAGAGGTCAAGGT
CATCACCTTGCACCCGTCCTACTTCGGGCCCAACATGCGCGAGTATCTCA
TCAACCGGTTAAACGAGGAGGAGGAAGGACGTTGTACGGGCGACCACTTC
GTAATCTGTGTGATGGACATGGTTGATATTGGCGAAGGACGGGTGCTCCC
AGGCAGCGGACAGGCAGAATATACTATCAAGTATCGGGCAATCATCTGGA
AGCCCTTCCGCGGAGAGACCACCATTGTAAAACATTCCTTCCGACATCAA
GTGGGAACCGAACACAGTACCGCCGCAATATACGGACCATGCGGACCAAG
TCATCGAGAAGGGAACCAGTTTACGGCTTAAGATTCTTGGTGTGAAGCCC
GACGTTGCGGCGATCAATGCCATTGGAACGATCAAGGAAGATTATCTCGG
GTCGATGCGATTGTTACGTCTGTCAAGCCCACCGGTATATTTACTTTGGC
CGGTCCATTGTCTGTTTTTATTGCACGGAAAATGTTTTTCCTTAAAGAAG
AGGTCAAGGTCATCACCTTGCACCCGTCCTACTTCGGGCCCAACATGCGC
GAGTATCTCATCAACCGGTTAAACGAGGAGGAGGAAGGACGTTGTACGGG
CGACCACTTCGTAATCTGTGTGATGGACATGGTTGATATTGGCGAAGGAC
GGGTGCTCCCAGGCAGCGGACAGGCAGAATATACTATCAAGTATCGGGCA
ATCATCTGGAAGCCCTTCCGCGGAGAGACCACCATTGTAAAACATTCCTT
CCGACATCAAGTGGGAACCGAACACAGTACCGCCGCAATATACGGACCAT
GCGGACCAAGTCATCGAGAAGGGAACCAGTTTACGGCTTAAGATTCTTGG
TGTGAAGCCCGACGTTGCGGCGATCAATGCCATTGGAACGATCAAGGAAG
ATTATCTCGGGTCGATGCGATTGTTACGTCTGTCAAGCCCACCGGTATAT
TTACTTTGGCCGGTCCATTGTCTGTTTTTATTGCACGGAAAATGTTTTTC
CTTAAAGAAGAGGTCAAGGTCATCACCTTGCACCCGTCCTACTTCGGGCC
CAACATGCGCGAGTATCTCATCAACCGGTTAAACGAGGAGGAGGAAGGAC
GTTGTACGGGCGACCACTTCGTAATCTGTGTGATGGACATGGTTGATATT
GGCGAAGGACGGGTGCTCCCAGGCAGCGGACAGGCAGAATATACTATCAA
GTATCGGGCAATCATCTGGAAGCCCTTCCGCGGAGAGACC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0003899 | DNA-directed 5'-3' RNA polymerase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264RW6 |
| DBxref | InterPro:IPR012340 |
| DBxref | InterPro:IPR005576 |
| DBxref | InterPro:IPR003029 |
| DBxref | InterPro:IPR036898 |
| DBxref | PFAM:PF03876 |
| DBxref | PFAM:PF00575 |
| Product | DNA-directed RNA polymerase subunit E |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851910.1 | supercontig | KZ851910.1:35571..37167 - |
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