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M747DRAFT_278158-T1, M747DRAFT_278158-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_278158-T1
Unique NameM747DRAFT_278158-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851910.1:627803..629191-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_278158-T1 ID=M747DRAFT_278158-T1|Name=M747DRAFT_278158-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1389bp|location=Sequence derived from alignment at KZ851910.1:627803..629191- (Aspergillus niger ATCC 13496)
CCTCGTTTCCTTGTAGTCTATCTGTCTTCTTCTTCTCTTCTTTACCCTCA
CGTAGGCTCTACATATCTCATTCCCTCCAATTCTCTTCGTATATTGCCAA
AATGGGTTCGACTTCGACCGTCGCAGACACCCGCTTCAAGCTGAACACCG
GGGCTGAGATCCCTGCTCTCGGACTCGGTATGATACATCTTCAGATAGTA
GCCACAAGGACATTCTGGCTAACGTCTGTGCAGGAACCTGGCAGTCAGGC
CCTGGAGAGGTCGAAAAGGCCGTGGCACATGCCATCTCCGTTGGATACAG
ACACATTGATACCGCTTTTGCTTACGGAAACGAAGGAGAAGTCGGCAAGG
GTATCAAGGCAGCCATCGAGTCTGGAGTTGTCAAGCGAGAGGACCTCTTT
GTCACAACTAAGCTCTGGAGCACATGGCACTACCGAGTGGAACAGGCTCT
GGACCAGAGCTTGAAGAACTTGGGGCTGGACTATGTTGATCTCTACCTGG
TCCACTGGCCGGTGGCTATGAACCCTAATGGTGAGTCCTCCACTAATTCA
GACTCAAGGCGATGCGCATGTTGACACTACAAAGGAAACCACCCCAATAT
TCCCACCCTTCCCGACGGTTCCCGCGACCTGCACCTCAACCACTCCCATA
TCAACACTTGGAAGGATATGGAGAAGCTTGTCGGTAGCGGAAAGACCAAG
GCCATTGGTGTTTGCAACTACAGCAGGCCCTACCTTGAGGAGCTCCTCGC
CCAAGCCACCGTGGTCCCGGCTGTCAACCAGATTGAGAACCACCCCTGTC
TTCCCCAGCAGGAGGCGGTCGACTTCTGCAAGGAGAAGGGCATTCACATC
ACGGCATACAGCCCTCTCGGCAGCACGGGCAGTCCGCTGCTGACGGCAGA
GCCCATTGTCGAGGTTGCGAAAAAGAAGGGTGTCGACCCAGCCACGGTCC
TGCTGAGCTGGCACAGTACGTATCTTCCATGCCGAATAATGCGAGAATTA
TCACTAACTGCATCCTCCGTATAGTCAGCCGTGGCTCTTCTGTCCTTGCC
AAGTCCGTGAACCCCTCTCGGATTGAGGGCAACCGCAACCTGGTGGCCTT
GGATGATGCTGACATGGCTACCATTGCCAAATACACGAATGACCTGGCCT
CGAAGAACGCCTTTCAGCGTTTTGTTTTCCCTCCTTTCAAGCTTGACTTT
GGATTCCCGGACAAGATCGGCCGCGTATAAGCTCCTGGTGAGTGGTCGAT
GGTCTAAGATGTTAGCAATCAAGGGTATAGAGTTATAGATGGTCTCAGGA
GATGTATAGCTCATAGAGCAGAGATGTCTGTACATTCCTTCCTACTTTAC
TGTGCATAATGAAAATGAAACTGTTATGATATCCATCTG
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Coding sequence (CDS) from alignment at KZ851910.1:627803..629191-

>M747DRAFT_278158-T1 ID=M747DRAFT_278158-T1|Name=M747DRAFT_278158-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3840bp|location=Sequence derived from alignment at KZ851910.1:627803..629191- (Aspergillus niger ATCC 13496)
TCAGCCGTGGCTCTTCTGTCCTTGCCAAGTCCGTGAACCCCTCTCGGATT
GAGGGCAACCGCAACCTGGTGGCCTTGGATGATGCTGACATGGCTACCAT
TGCCAAATACACGAATGACCTGGCCTCGAAGAACGCCTTTCAGCGTTTTG
TTTTCCCTCCTTTCAAGCTTGACTTTGGATTCCCGGACAAGATCGGCCGC
GTATAAGAAACCACCCCAATATTCCCACCCTTCCCGACGGTTCCCGCGAC
CTGCACCTCAACCACTCCCATATCAACACTTGGAAGGATATGGAGAAGCT
TGTCGGTAGCGGAAAGACCAAGGCCATTGGTGTTTGCAACTACAGCAGGC
CCTACCTTGAGGAGCTCCTCGCCCAAGCCACCGTGGTCCCGGCTGTCAAC
CAGATTGAGAACCACCCCTGTCTTCCCCAGCAGGAGGCGGTCGACTTCTG
CAAGGAGAAGGGCATTCACATCACGGCATACAGCCCTCTCGGCAGCACGG
GCAGTCCGCTGCTGACGGCAGAGCCCATTGTCGAGGTTGCGAAAAAGAAG
GGTGTCGACCCAGCCACGGTCCTGCTGAGCTGGCACAGAACCTGGCAGTC
AGGCCCTGGAGAGGTCGAAAAGGCCGTGGCACATGCCATCTCCGTTGGAT
ACAGACACATTGATACCGCTTTTGCTTACGGAAACGAAGGAGAAGTCGGC
AAGGGTATCAAGGCAGCCATCGAGTCTGGAGTTGTCAAGCGAGAGGACCT
CTTTGTCACAACTAAGCTCTGGAGCACATGGCACTACCGAGTGGAACAGG
CTCTGGACCAGAGCTTGAAGAACTTGGGGCTGGACTATGTTGATCTCTAC
CTGGTCCACTGGCCGGTGGCTATGAACCCTAATGATGGGTTCGACTTCGA
CCGTCGCAGACACCCGCTTCAAGCTGAACACCGGGGCTGAGATCCCTGCT
CTCGGACTCGTCAGCCGTGGCTCTTCTGTCCTTGCCAAGTCCGTGAACCC
CTCTCGGATTGAGGGCAACCGCAACCTGGTGGCCTTGGATGATGCTGACA
TGGCTACCATTGCCAAATACACGAATGACCTGGCCTCGAAGAACGCCTTT
CAGCGTTTTGTTTTCCCTCCTTTCAAGCTTGACTTTGGATTCCCGGACAA
GATCGGCCGCGTATAAGAAACCACCCCAATATTCCCACCCTTCCCGACGG
TTCCCGCGACCTGCACCTCAACCACTCCCATATCAACACTTGGAAGGATA
TGGAGAAGCTTGTCGGTAGCGGAAAGACCAAGGCCATTGGTGTTTGCAAC
TACAGCAGGCCCTACCTTGAGGAGCTCCTCGCCCAAGCCACCGTGGTCCC
GGCTGTCAACCAGATTGAGAACCACCCCTGTCTTCCCCAGCAGGAGGCGG
TCGACTTCTGCAAGGAGAAGGGCATTCACATCACGGCATACAGCCCTCTC
GGCAGCACGGGCAGTCCGCTGCTGACGGCAGAGCCCATTGTCGAGGTTGC
GAAAAAGAAGGGTGTCGACCCAGCCACGGTCCTGCTGAGCTGGCACAGAA
CCTGGCAGTCAGGCCCTGGAGAGGTCGAAAAGGCCGTGGCACATGCCATC
TCCGTTGGATACAGACACATTGATACCGCTTTTGCTTACGGAAACGAAGG
AGAAGTCGGCAAGGGTATCAAGGCAGCCATCGAGTCTGGAGTTGTCAAGC
GAGAGGACCTCTTTGTCACAACTAAGCTCTGGAGCACATGGCACTACCGA
GTGGAACAGGCTCTGGACCAGAGCTTGAAGAACTTGGGGCTGGACTATGT
TGATCTCTACCTGGTCCACTGGCCGGTGGCTATGAACCCTAATGATGGGT
TCGACTTCGACCGTCGCAGACACCCGCTTCAAGCTGAACACCGGGGCTGA
GATCCCTGCTCTCGGACTCGTCAGCCGTGGCTCTTCTGTCCTTGCCAAGT
CCGTGAACCCCTCTCGGATTGAGGGCAACCGCAACCTGGTGGCCTTGGAT
GATGCTGACATGGCTACCATTGCCAAATACACGAATGACCTGGCCTCGAA
GAACGCCTTTCAGCGTTTTGTTTTCCCTCCTTTCAAGCTTGACTTTGGAT
TCCCGGACAAGATCGGCCGCGTATAAGAAACCACCCCAATATTCCCACCC
TTCCCGACGGTTCCCGCGACCTGCACCTCAACCACTCCCATATCAACACT
TGGAAGGATATGGAGAAGCTTGTCGGTAGCGGAAAGACCAAGGCCATTGG
TGTTTGCAACTACAGCAGGCCCTACCTTGAGGAGCTCCTCGCCCAAGCCA
CCGTGGTCCCGGCTGTCAACCAGATTGAGAACCACCCCTGTCTTCCCCAG
CAGGAGGCGGTCGACTTCTGCAAGGAGAAGGGCATTCACATCACGGCATA
CAGCCCTCTCGGCAGCACGGGCAGTCCGCTGCTGACGGCAGAGCCCATTG
TCGAGGTTGCGAAAAAGAAGGGTGTCGACCCAGCCACGGTCCTGCTGAGC
TGGCACAGAACCTGGCAGTCAGGCCCTGGAGAGGTCGAAAAGGCCGTGGC
ACATGCCATCTCCGTTGGATACAGACACATTGATACCGCTTTTGCTTACG
GAAACGAAGGAGAAGTCGGCAAGGGTATCAAGGCAGCCATCGAGTCTGGA
GTTGTCAAGCGAGAGGACCTCTTTGTCACAACTAAGCTCTGGAGCACATG
GCACTACCGAGTGGAACAGGCTCTGGACCAGAGCTTGAAGAACTTGGGGC
TGGACTATGTTGATCTCTACCTGGTCCACTGGCCGGTGGCTATGAACCCT
AATGATGGGTTCGACTTCGACCGTCGCAGACACCCGCTTCAAGCTGAACA
CCGGGGCTGAGATCCCTGCTCTCGGACTCGTCAGCCGTGGCTCTTCTGTC
CTTGCCAAGTCCGTGAACCCCTCTCGGATTGAGGGCAACCGCAACCTGGT
GGCCTTGGATGATGCTGACATGGCTACCATTGCCAAATACACGAATGACC
TGGCCTCGAAGAACGCCTTTCAGCGTTTTGTTTTCCCTCCTTTCAAGCTT
GACTTTGGATTCCCGGACAAGATCGGCCGCGTATAAGAAACCACCCCAAT
ATTCCCACCCTTCCCGACGGTTCCCGCGACCTGCACCTCAACCACTCCCA
TATCAACACTTGGAAGGATATGGAGAAGCTTGTCGGTAGCGGAAAGACCA
AGGCCATTGGTGTTTGCAACTACAGCAGGCCCTACCTTGAGGAGCTCCTC
GCCCAAGCCACCGTGGTCCCGGCTGTCAACCAGATTGAGAACCACCCCTG
TCTTCCCCAGCAGGAGGCGGTCGACTTCTGCAAGGAGAAGGGCATTCACA
TCACGGCATACAGCCCTCTCGGCAGCACGGGCAGTCCGCTGCTGACGGCA
GAGCCCATTGTCGAGGTTGCGAAAAAGAAGGGTGTCGACCCAGCCACGGT
CCTGCTGAGCTGGCACAGAACCTGGCAGTCAGGCCCTGGAGAGGTCGAAA
AGGCCGTGGCACATGCCATCTCCGTTGGATACAGACACATTGATACCGCT
TTTGCTTACGGAAACGAAGGAGAAGTCGGCAAGGGTATCAAGGCAGCCAT
CGAGTCTGGAGTTGTCAAGCGAGAGGACCTCTTTGTCACAACTAAGCTCT
GGAGCACATGGCACTACCGAGTGGAACAGGCTCTGGACCAGAGCTTGAAG
AACTTGGGGCTGGACTATGTTGATCTCTACCTGGTCCACTGGCCGGTGGC
TATGAACCCTAATGATGGGTTCGACTTCGACCGTCGCAGACACCCGCTTC
AAGCTGAACACCGGGGCTGAGATCCCTGCTCTCGGACTCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
GAR1M747DRAFT_278158Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_278158-T1M747DRAFT_278158-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_278158-T1.cdsM747DRAFT_278158-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_278158-T1.utr3p1M747DRAFT_278158-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_278158-T1.exon4M747DRAFT_278158-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_278158-T1.exon3M747DRAFT_278158-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_278158-T1.exon2M747DRAFT_278158-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_278158-T1.exon1M747DRAFT_278158-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_278158-T1.utr5p1M747DRAFT_278158-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR018170
DBxrefInterPro:IPR023210
DBxrefInterPro:IPR036812
DBxrefInterPro:IPR020471
DBxrefPFAM:PF00248
ProductH/ACA snoRNP pseudouridylase subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851910.1supercontigKZ851910.1:627803..629191 -
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