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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851910.1:804212..807095+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_278272-T1 ID=M747DRAFT_278272-T1|Name=M747DRAFT_278272-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2884bp|location=Sequence derived from alignment at KZ851910.1:804212..807095+ (Aspergillus niger ATCC 13496)
GCTACTGCCATCCACAACTCTCCCACCTCCTATTGCGCCTCCATCGCCAA
CTTGGTGTCGCGCCTCTTCTGGATATATCGATTTTGGTACAGATCGCATG
CCCGTTGCAATTTAACCGTTTTTCAAGAGTTTGCGCTCGCTAGGGTTGAG
ATTGACCGCCGCAGTCGCGGCTTTTTCCGTCATCATGTCGCAGGATACAG
GATTGTTCAGCATCAGGCGCACCCGCGAGGTATGTGCCTTGCTTCCTTCT
GGCCTACCCCTCTTGTACAATACTAATCTAGCTGTCTCAGTCTATGGCGA
TGGGTAGCCAAAATTACTCCGCTCTTCCGCAACCCTCCTCGGCCTTGAAG
CGCACCAGCTCCATTGGGTACCAGAATCCTCCTTTCACCTCTCAGCACAC
GCGTATGTCGCTTCTCAACTCCGCCAGTCGCCCCCAACAGCCCAACTTTC
AGCGTTCTTCTTCTGGTGGAGGCTTTGGTGCCGATGCCGGTCTCTCATCA
GTCAGACGCTCCGTCTCCAGTAATATGTTCCATGGTCCTAGTGTCGGGCG
CCCAAGCTTTGCTCCCGGGCCGATGTCGTCGCAAAGCACAGCAGGGTCGC
AAGGATTGCAACGGAGGAGTAGTGTCTTTTCACGACCATCTGTGGGTGGC
GCCATGGGTCATCATTCTTTCTTCACTCAAGTCCCGTCAGTTGCTGGTGT
CCCCAGGGACCCACGGCCACTCAGGGACAGGTCTTTCCAAGCTCGTATTG
GACAAGAGCTCTTGGAATATCTGACGCATAACAATTTTGAGCTTGAGATG
AAGCATTCACTGGGGCAGAACACCTTACGGTCTCCTACTCAAAAAGATTT
CAACTACATCTTCCAGTGGCTGTATCATCGCATTGATCCCGGGTACAAGT
TTCAGAAGAGCATGGATGCGGAGGTACCACCTATTCTCAAGCAACTACGT
TACCCCTACGAAAAGGGTATCACTAAGTCGCAGATTGCGGCTGTGGGAGG
CCAGAACTGGCCGACATTCCTCGGTATGCTGCATTGGTTGATGCAACTCG
CTCAGATGATGGATCGATATTTGCTCGGGGAATACGATGAAGCTTGCGCA
GAGATGGGAGTCGATGTATCCGGCGACCGGATTATCTTCCGTTTCCTTAC
AAGTGCCTACCATGACTGGCTGCAAGGCGGGGAAGATGAGGATGACGCAA
CAGCAGAGAAGAGACTAGTACCTCACGTCGAAATGATGGCCCAGGAGTTT
GAAAGAGGAAATGAAAAATATGTTCAAGAGATGGAGTCTTTGGAAGCCGA
AAACCGAGCGCTACGTGACCAGATTGAAGAGATGGAGAAGAACGCTCCGG
ACATGGCCAAGCTAGACAAGCACTTCAGGATTTTGGAGGACGACAAGAGG
AAGTTTGAGGACTACAACCAGAATGTCCAGGGCAAGATCGAGAAATATGA
GACCCGTATCAAATTCCTGGATGACGAGCTTAAGAAGACGGAGGATGACC
TGCAAGCCGCCGAAGAGGAGCGGGCTGGGCTTCAGGCCAGTGTTGACCAA
CAAGGCCTGACAATCCAGGATATTGACCGTATGAACACGGAACGTGAACG
CCTGCAGAGGAATCTTGACGATACGGTCAATCGGTTGGAAGAAACGCACG
CGCGGGTCATGGCAAAGGAGGCCGAGGCTAGTAGAAAACTCGAAGATTTA
GAGGAGATCGTCAAGGTCTACAACACGCTCGGATACCAGAATAGTTTGAT
TCCTTCGTCAGCTGTCAATGCCAAGGGCGACGATTACGAACTCAGTCTCA
ACGTCAACGAGAGCAATTTCTCCGCCTCTCAGGTCGGTGGTCTAGCGAAC
CGAATCTCTACCGATGGAGATCGACTATTGGCGGACCCGTTCACTGGCTA
TCACCCAGCACACTTGCTCAACCTCGATCTCCGCGGCATCGTGCGCAGCA
ATCTACAGGCTCTCCGGAAGGAGATCAACGAGCGCCGGAAGCGTGCCATT
GATGATGACTTGGAACGACGCAATCTCTTGGACAACATCAAGGAAGCAAT
GGACGAGAAGCGAAGCGAGGTTGAGGCTTTGGAGCATAAGGCACGTGCCG
CTGAAGAGGAATTCGAGCGGCTCAAGGAGGTCACCACAACGCAGAAGCTT
GCTTCGGATGCACAGATTGAAAAGATGGAGAAGGAGCTGGCCAAGATGCG
AGCCACGTTGGGCGAAAGCGTCCAACTGATGGAGCAGCGCGAGATGAATA
CTAACATTGAGTATGAACAATTGACTCTCCGCGCAAATGCGTTGCGTGAG
GAGCTACACACCAATGTGGAGAGCATGCTGAACGATGTCATCCGTTTCAA
GGTCCATATTCAAAAAGGTCTGGAAGACTACGAGAGCTTTGTTGTCGACG
AGGTCGAGCAGGAATTGGGTGGTGACATGCAGTTTGCAGATGAGGACATT
GAAATGGGAGTTGAAGAGGAAGAGGAGGAGCTTTGAATGATATTTCCGTG
AATTCTGCGCCACGATGACGGTTCGAGTATTATGATTGATGATTGCGGGA
AGGAGTTTGGTTCGAGAAATCCGAGAAATCAGGCGTGTTTCATACTATCT
TGCCGGAATCTCACCGGCCAGAGAAAGGACGCATGTCTATATGCCCTGGA
GTCGCAGTGTCATAAACATTTTGTTCATTCTGCTGGTATCGTTGTCTACT
ACTGGGGCGCTATTGGGAGCTTGGTGGTTGGACTTGTGAGTTATGGGTAT
TTTGGCTTGTTCGGTCGTGGGATTTTATCTTGTTTATGATACCTTTGATG
TTCAAATGCGCCATTAGTGTTGATAATTGCTAGATGTGGGTGTACATACA
TGCCATGCCTTTCACAGCCTTTATAAAAAACCGC back to topCoding sequence (CDS) from alignment at KZ851910.1:804212..807095+ >M747DRAFT_278272-T1 ID=M747DRAFT_278272-T1|Name=M747DRAFT_278272-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4482bp|location=Sequence derived from alignment at KZ851910.1:804212..807095+ (Aspergillus niger ATCC 13496)
ATGTCGCAGGATACAGGATTGTTCAGCATCAGGCGCACCCGCGAGTCTAT
GGCGATGGGTAGCCAAAATTACTCCGCTCTTCCGCAACCCTCCTCGGCCT
TGAAGCGCACCAGCTCCATTGGGTACCAGAATCCTCCTTTCACCTCTCAG
CACACGCGTATGTCGCTTCTCAACTCCGCCAGTCGCCCCCAACAGCCCAA
CTTTCAGCGTTCTTCTTCTGGTGGAGGCTTTGGTGCCGATGCCGGTCTCT
CATCAGTCAGACGCTCCGTCTCCAGTAATATGTTCCATGGTCCTAGTGTC
GGGCGCCCAAGCTTTGCTCCCGGGCCGATGTCGTCGCAAAGCACAGCAGG
GTCGCAAGGATTGCAACGGAGGAGTAGTGTCTTTTCACGACCATCTGTGG
GTGGCGCCATGGGTCATCATTCTTTCTTCACTCAAGTCCCGTCAGTTGCT
GGTGTCCCCAGGGACCCACGGCCACTCAGGGACAGGTCTTTCCAAGCTCG
TATTGGACAAGAGCTCTTGGAATATCTGACGCATAACAATTTTGAGCTTG
AGATGAAGCATTCACTGGGGCAGAACACCTTACGGTCTCCTACTCAAAAA
GATTTCAACTACATCTTCCAGTGGCTGTATCATCGCATTGATCCCGGGTA
CAAGTTTCAGAAGAGCATGGATGCGGAGGTACCACCTATTCTCAAGCAAC
TACGTTACCCCTACGAAAAGGGTATCACTAAGTCGCAGATTGCGGCTGTG
GGAGGCCAGAACTGGCCGACATTCCTCGGTATGCTGCATTGGTTGATGCA
ACTCGCTCAGATGATGGATCGATATTTGCTCGGGGAATACGATGAAGCTT
GCGCAGAGATGGGAGTCGATGTATCCGGCGACCGGATTATCTTCCGTTTC
CTTACAAGTGCCTACCATGACTGGCTGCAAGGCGGGGAAGATGAGGATGA
CGCAACAGCAGAGAAGAGACTAGTACCTCACGTCGAAATGATGGCCCAGG
AGTTTGAAAGAGGAAATGAAAAATATGTTCAAGAGATGGAGTCTTTGGAA
GCCGAAAACCGAGCGCTACGTGACCAGATTGAAGAGATGGAGAAGAACGC
TCCGGACATGGCCAAGCTAGACAAGCACTTCAGGATTTTGGAGGACGACA
AGAGGAAGTTTGAGGACTACAACCAGAATGTCCAGGGCAAGATCGAGAAA
TATGAGACCCGTATCAAATTCCTGGATGACGAGCTTAAGAAGACGGAGGA
TGACCTGCAAGCCGCCGAAGAGGAGCGGGCTGGGCTTCAGGCCAGTGTTG
ACCAACAAGGCCTGACAATCCAGGATATTGACCGTATGAACACGGAACGT
GAACGCCTGCAGAGGAATCTTGACGATACGGTCAATCGGTTGGAAGAAAC
GCACGCGCGGGTCATGGCAAAGGAGGCCGAGGCTAGTAGAAAACTCGAAG
ATTTAGAGGAGATCGTCAAGGTCTACAACACGCTCGGATACCAGAATAGT
TTGATTCCTTCGTCAGCTGTCAATGCCAAGGGCGACGATTACGAACTCAG
TCTCAACGTCAACGAGAGCAATTTCTCCGCCTCTCAGGTCGGTGGTCTAG
CGAACCGAATCTCTACCGATGGAGATCGACTATTGGCGGACCCGTTCACT
GGCTATCACCCAGCACACTTGCTCAACCTCGATCTCCGCGGCATCGTGCG
CAGCAATCTACAGGCTCTCCGGAAGGAGATCAACGAGCGCCGGAAGCGTG
CCATTGATGATGACTTGGAACGACGCAATCTCTTGGACAACATCAAGGAA
GCAATGGACGAGAAGCGAAGCGAGGTTGAGGCTTTGGAGCATAAGGCACG
TGCCGCTGAAGAGGAATTCGAGCGGCTCAAGGAGGTCACCACAACGCAGA
AGCTTGCTTCGGATGCACAGATTGAAAAGATGGAGAAGGAGCTGGCCAAG
ATGCGAGCCACGTTGGGCGAAAGCGTCCAACTGATGGAGCAGCGCGAGAT
GAATACTAACATTGAGTATGAACAATTGACTCTCCGCGCAAATGCGTTGC
GTGAGGAGCTACACACCAATGTGGAGAGCATGCTGAACGATGTCATCCGT
TTCAAGGTCCATATTCAAAAAGGTCTGGAAGACTACGAGAGCTTTGTTGT
CGACGAGGTCGAGCAGGAATTGGGTGGTGACATGCAGTTTGCAGATGAGG
ACATTGAAATGGGAGTTGAAGAGGAAGAGGAGGAGCTTTGAATGTCGCAG
GATACAGGATTGTTCAGCATCAGGCGCACCCGCGAGTCTATGGCGATGGG
TAGCCAAAATTACTCCGCTCTTCCGCAACCCTCCTCGGCCTTGAAGCGCA
CCAGCTCCATTGGGTACCAGAATCCTCCTTTCACCTCTCAGCACACGCGT
ATGTCGCTTCTCAACTCCGCCAGTCGCCCCCAACAGCCCAACTTTCAGCG
TTCTTCTTCTGGTGGAGGCTTTGGTGCCGATGCCGGTCTCTCATCAGTCA
GACGCTCCGTCTCCAGTAATATGTTCCATGGTCCTAGTGTCGGGCGCCCA
AGCTTTGCTCCCGGGCCGATGTCGTCGCAAAGCACAGCAGGGTCGCAAGG
ATTGCAACGGAGGAGTAGTGTCTTTTCACGACCATCTGTGGGTGGCGCCA
TGGGTCATCATTCTTTCTTCACTCAAGTCCCGTCAGTTGCTGGTGTCCCC
AGGGACCCACGGCCACTCAGGGACAGGTCTTTCCAAGCTCGTATTGGACA
AGAGCTCTTGGAATATCTGACGCATAACAATTTTGAGCTTGAGATGAAGC
ATTCACTGGGGCAGAACACCTTACGGTCTCCTACTCAAAAAGATTTCAAC
TACATCTTCCAGTGGCTGTATCATCGCATTGATCCCGGGTACAAGTTTCA
GAAGAGCATGGATGCGGAGGTACCACCTATTCTCAAGCAACTACGTTACC
CCTACGAAAAGGGTATCACTAAGTCGCAGATTGCGGCTGTGGGAGGCCAG
AACTGGCCGACATTCCTCGGTATGCTGCATTGGTTGATGCAACTCGCTCA
GATGATGGATCGATATTTGCTCGGGGAATACGATGAAGCTTGCGCAGAGA
TGGGAGTCGATGTATCCGGCGACCGGATTATCTTCCGTTTCCTTACAAGT
GCCTACCATGACTGGCTGCAAGGCGGGGAAGATGAGGATGACGCAACAGC
AGAGAAGAGACTAGTACCTCACGTCGAAATGATGGCCCAGGAGTTTGAAA
GAGGAAATGAAAAATATGTTCAAGAGATGGAGTCTTTGGAAGCCGAAAAC
CGAGCGCTACGTGACCAGATTGAAGAGATGGAGAAGAACGCTCCGGACAT
GGCCAAGCTAGACAAGCACTTCAGGATTTTGGAGGACGACAAGAGGAAGT
TTGAGGACTACAACCAGAATGTCCAGGGCAAGATCGAGAAATATGAGACC
CGTATCAAATTCCTGGATGACGAGCTTAAGAAGACGGAGGATGACCTGCA
AGCCGCCGAAGAGGAGCGGGCTGGGCTTCAGGCCAGTGTTGACCAACAAG
GCCTGACAATCCAGGATATTGACCGTATGAACACGGAACGTGAACGCCTG
CAGAGGAATCTTGACGATACGGTCAATCGGTTGGAAGAAACGCACGCGCG
GGTCATGGCAAAGGAGGCCGAGGCTAGTAGAAAACTCGAAGATTTAGAGG
AGATCGTCAAGGTCTACAACACGCTCGGATACCAGAATAGTTTGATTCCT
TCGTCAGCTGTCAATGCCAAGGGCGACGATTACGAACTCAGTCTCAACGT
CAACGAGAGCAATTTCTCCGCCTCTCAGGTCGGTGGTCTAGCGAACCGAA
TCTCTACCGATGGAGATCGACTATTGGCGGACCCGTTCACTGGCTATCAC
CCAGCACACTTGCTCAACCTCGATCTCCGCGGCATCGTGCGCAGCAATCT
ACAGGCTCTCCGGAAGGAGATCAACGAGCGCCGGAAGCGTGCCATTGATG
ATGACTTGGAACGACGCAATCTCTTGGACAACATCAAGGAAGCAATGGAC
GAGAAGCGAAGCGAGGTTGAGGCTTTGGAGCATAAGGCACGTGCCGCTGA
AGAGGAATTCGAGCGGCTCAAGGAGGTCACCACAACGCAGAAGCTTGCTT
CGGATGCACAGATTGAAAAGATGGAGAAGGAGCTGGCCAAGATGCGAGCC
ACGTTGGGCGAAAGCGTCCAACTGATGGAGCAGCGCGAGATGAATACTAA
CATTGAGTATGAACAATTGACTCTCCGCGCAAATGCGTTGCGTGAGGAGC
TACACACCAATGTGGAGAGCATGCTGAACGATGTCATCCGTTTCAAGGTC
CATATTCAAAAAGGTCTGGAAGACTACGAGAGCTTTGTTGTCGACGAGGT
CGAGCAGGAATTGGGTGGTGACATGCAGTTTGCAGATGAGGACATTGAAA
TGGGAGTTGAAGAGGAAGAGGAGGAGCTTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0031262 | Ndc80 complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0051315 | attachment of mitotic spindle microtubules to kinetochore |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092619RJ |
| DBxref | InterPro:IPR038273 |
| DBxref | InterPro:IPR005550 |
| DBxref | PFAM:PF03801 |
| Product | kinetochore-associated Ndc80 complex subunit ndc80 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851910.1 | supercontig | KZ851910.1:804212..807095 + |
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