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M747DRAFT_27828-T1, M747DRAFT_27828-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_27828-T1
Unique NameM747DRAFT_27828-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851912.1:242576..244541-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_27828-T1 ID=M747DRAFT_27828-T1|Name=M747DRAFT_27828-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1966bp|location=Sequence derived from alignment at KZ851912.1:242576..244541- (Aspergillus niger ATCC 13496)
CCGAACCGTATCATATCGCCTCCGTTCTCAAGCAGCAATTTTCATCAGAC
AACACGACCCTCGACCCTCGCCCTCTCCACCCCCCATAACCCCCCTTTTC
TAGAACCGCTGTTGTCTCTCGATTTCACTTGCAATCATGGCTGCCAACGG
CGACTTCTCTGACGACGAGTCCCAGCCTGGATCCCCCATGCTCGATGCGA
ACGGTCACGATGACATCGAAGAGCAAGAGCCCCTCGACCAGGAGGCCAAG
CCTCTGAAGTCTGCGATGAAGAAGGAAGTTCCTCCTCCCCAGCCCAAGCG
GCCAGAGCTGCCCGAGCAGCCGAATCCGGAGACTCTGGACCTGTCCACCC
TGACTCCTTTGACCCCCGAAATTATTGCGCGCCAAGCCACAATCAACATT
GGCACCATCGGTCACGTCGCTCACGGCAAGTCGACGGTCGTTAAGGCTAT
CTCCGAGGTCCAGACTGTCCGTTTCAAGAACGAGTTGGAGCGAAACATTA
CGATCAAGCTGGGTTATGCCAACGCAAAGATCTACAAGTGCGACAACCCC
GAGTGCCCTAGGCCGACATGCTTTAAGAGCTTTAAGAGTGAGAAGGAAGT
CGACCCGCCTTGTGAGAGGGATGGCTGCGGTGGCCGCTACAGACTGTTGA
GACATGTGTCGTACGTTGAACCTCGGACTCAAGTGTGGACAAATTCTTCA
GTGCTAACTCAGAGACCCAACTTAGTTTCGTCGACTGCCCCGGTCACGAT
ATTCTGATGAGTACTATGTTGTCTGGTGCCGCCGTCATGGACGCTGCCCT
CCTCCTTATTGCCGGAAACGAAACTTGCCCTCAACCTCAGACTTCGGAGC
ACTTGGCTGCCATCGAAATCATGAAGCTCAGCCACATCATCATTTTGCAA
AACAAGGTGGACTTGATGAGAGAGGATGGTGCCCTGCAACATTACCAGTC
GATCTTGAAGTTCATCCGTGGTACTGTCGCCGATGGCTCTCCGATCATTC
CCATTTCTGCACAGCTCAAGTACAACATCGATGCTGTCAACGAATACCTG
GTTTCGCACATTCCCGTCCCCGTCCGCGATTTCACCGCTTCCCCCCACAT
GATCGTCATTCGTTCCTTCGATGTGAACAAGCCTGGTGCCGAAATTGAGG
AGCTGAAGGGTGGTGTTGCCGGTGGTTCGATCTTGACTGGTGTTCTGAAG
CAGAACGACGAGATTGAGATTCGTCCCGGTCTGGTCACCAAGGACGAGAA
CGGCAAGATTCAGTGCCGTCCCATCTTCTCTCGGGTCATGTCCCTCTTTG
CCGAGCACAACGACCTCAAGTTTGCCGTCCCTGGTGGTTTGATTGGTGTC
GGTACTCGTGTAGACCCTACTCTGTGCCGTGCTGATCGTCTCGTTGGTTT
CGTCCTGGGTCACCGCGGACGCCTTCCCGCTATCTACACTGAGTTGGAAG
TCAACTACTTCTTGCTTCGTCGTCTGCTCGGTGTCAAGACTGCCGATGGC
AAGCAGGCCAAGGTTGCCAAGCTTACTAAGAACGAGGTTCTCATGGTCAA
CATCGGTTCTACGGCTACCGGAGCTAAGGTCGTGGGTGTCAAGGCTGATG
CTGCCAAGCTCAGCTTGACCAGCCCTGCCTGTACCGAGGTCGGAGAGAAG
ATTGCCATCAGTCGGAGAATTGAGAAGCACTGGCGTCTGATCGGTTGGGC
CAACATTGTCGCGTAAGTCTTATGCTCCACTCCTTAGCTTGCGATTTCTT
CCCAGCTCTTGAGAGAATGATGTTACTAATTACGGAAACAGTGGTAACAC
CCTTGAGCCCATCCTGAACTAAAGAAGTTATTGCCCGCTTGGATGGCCAG
GCTTGTATCCATCAGGTTACGGCTGGTGGAGAAGTCAAAGAGTATCTGAC
ACCAAGTCTTGGCAGGGTCAAGTCACGAATGAAGTAGAATGGTTTGCAGT
AGCGAAAGGGGGTGTC
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Coding sequence (CDS) from alignment at KZ851912.1:242576..244541-

>M747DRAFT_27828-T1 ID=M747DRAFT_27828-T1|Name=M747DRAFT_27828-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4626bp|location=Sequence derived from alignment at KZ851912.1:242576..244541- (Aspergillus niger ATCC 13496)
TGGTAACACCCTTGAGCCCATCCTGAACTAATTTCGTCGACTGCCCCGGT
CACGATATTCTGATGAGTACTATGTTGTCTGGTGCCGCCGTCATGGACGC
TGCCCTCCTCCTTATTGCCGGAAACGAAACTTGCCCTCAACCTCAGACTT
CGGAGCACTTGGCTGCCATCGAAATCATGAAGCTCAGCCACATCATCATT
TTGCAAAACAAGGTGGACTTGATGAGAGAGGATGGTGCCCTGCAACATTA
CCAGTCGATCTTGAAGTTCATCCGTGGTACTGTCGCCGATGGCTCTCCGA
TCATTCCCATTTCTGCACAGCTCAAGTACAACATCGATGCTGTCAACGAA
TACCTGGTTTCGCACATTCCCGTCCCCGTCCGCGATTTCACCGCTTCCCC
CCACATGATCGTCATTCGTTCCTTCGATGTGAACAAGCCTGGTGCCGAAA
TTGAGGAGCTGAAGGGTGGTGTTGCCGGTGGTTCGATCTTGACTGGTGTT
CTGAAGCAGAACGACGAGATTGAGATTCGTCCCGGTCTGGTCACCAAGGA
CGAGAACGGCAAGATTCAGTGCCGTCCCATCTTCTCTCGGGTCATGTCCC
TCTTTGCCGAGCACAACGACCTCAAGTTTGCCGTCCCTGGTGGTTTGATT
GGTGTCGGTACTCGTGTAGACCCTACTCTGTGCCGTGCTGATCGTCTCGT
TGGTTTCGTCCTGGGTCACCGCGGACGCCTTCCCGCTATCTACACTGAGT
TGGAAGTCAACTACTTCTTGCTTCGTCGTCTGCTCGGTGTCAAGACTGCC
GATGGCAAGCAGGCCAAGGTTGCCAAGCTTACTAAGAACGAGGTTCTCAT
GGTCAACATCGGTTCTACGGCTACCGGAGCTAAGGTCGTGGGTGTCAAGG
CTGATGCTGCCAAGCTCAGCTTGACCAGCCCTGCCTGTACCGAGGTCGGA
GAGAAGATTGCCATCAGTCGGAGAATTGAGAAGCACTGGCGTCTGATCGG
TTGGGCCAACATTGTCGCATGGCTGCCAACGGCGACTTCTCTGACGACGA
GTCCCAGCCTGGATCCCCCATGCTCGATGCGAACGGTCACGATGACATCG
AAGAGCAAGAGCCCCTCGACCAGGAGGCCAAGCCTCTGAAGTCTGCGATG
AAGAAGGAAGTTCCTCCTCCCCAGCCCAAGCGGCCAGAGCTGCCCGAGCA
GCCGAATCCGGAGACTCTGGACCTGTCCACCCTGACTCCTTTGACCCCCG
AAATTATTGCGCGCCAAGCCACAATCAACATTGGCACCATCGGTCACGTC
GCTCACGGCAAGTCGACGGTCGTTAAGGCTATCTCCGAGGTCCAGACTGT
CCGTTTCAAGAACGAGTTGGAGCGAAACATTACGATCAAGCTGGGTTATG
CCAACGCAAAGATCTACAAGTGCGACAACCCCGAGTGCCCTAGGCCGACA
TGCTTTAAGAGCTTTAAGAGTGAGAAGGAAGTCGACCCGCCTTGTGAGAG
GGATGGCTGCGGTGGCCGCTACAGACTGTTGAGACATGTGTCTGGTAACA
CCCTTGAGCCCATCCTGAACTAATTTCGTCGACTGCCCCGGTCACGATAT
TCTGATGAGTACTATGTTGTCTGGTGCCGCCGTCATGGACGCTGCCCTCC
TCCTTATTGCCGGAAACGAAACTTGCCCTCAACCTCAGACTTCGGAGCAC
TTGGCTGCCATCGAAATCATGAAGCTCAGCCACATCATCATTTTGCAAAA
CAAGGTGGACTTGATGAGAGAGGATGGTGCCCTGCAACATTACCAGTCGA
TCTTGAAGTTCATCCGTGGTACTGTCGCCGATGGCTCTCCGATCATTCCC
ATTTCTGCACAGCTCAAGTACAACATCGATGCTGTCAACGAATACCTGGT
TTCGCACATTCCCGTCCCCGTCCGCGATTTCACCGCTTCCCCCCACATGA
TCGTCATTCGTTCCTTCGATGTGAACAAGCCTGGTGCCGAAATTGAGGAG
CTGAAGGGTGGTGTTGCCGGTGGTTCGATCTTGACTGGTGTTCTGAAGCA
GAACGACGAGATTGAGATTCGTCCCGGTCTGGTCACCAAGGACGAGAACG
GCAAGATTCAGTGCCGTCCCATCTTCTCTCGGGTCATGTCCCTCTTTGCC
GAGCACAACGACCTCAAGTTTGCCGTCCCTGGTGGTTTGATTGGTGTCGG
TACTCGTGTAGACCCTACTCTGTGCCGTGCTGATCGTCTCGTTGGTTTCG
TCCTGGGTCACCGCGGACGCCTTCCCGCTATCTACACTGAGTTGGAAGTC
AACTACTTCTTGCTTCGTCGTCTGCTCGGTGTCAAGACTGCCGATGGCAA
GCAGGCCAAGGTTGCCAAGCTTACTAAGAACGAGGTTCTCATGGTCAACA
TCGGTTCTACGGCTACCGGAGCTAAGGTCGTGGGTGTCAAGGCTGATGCT
GCCAAGCTCAGCTTGACCAGCCCTGCCTGTACCGAGGTCGGAGAGAAGAT
TGCCATCAGTCGGAGAATTGAGAAGCACTGGCGTCTGATCGGTTGGGCCA
ACATTGTCGCATGGCTGCCAACGGCGACTTCTCTGACGACGAGTCCCAGC
CTGGATCCCCCATGCTCGATGCGAACGGTCACGATGACATCGAAGAGCAA
GAGCCCCTCGACCAGGAGGCCAAGCCTCTGAAGTCTGCGATGAAGAAGGA
AGTTCCTCCTCCCCAGCCCAAGCGGCCAGAGCTGCCCGAGCAGCCGAATC
CGGAGACTCTGGACCTGTCCACCCTGACTCCTTTGACCCCCGAAATTATT
GCGCGCCAAGCCACAATCAACATTGGCACCATCGGTCACGTCGCTCACGG
CAAGTCGACGGTCGTTAAGGCTATCTCCGAGGTCCAGACTGTCCGTTTCA
AGAACGAGTTGGAGCGAAACATTACGATCAAGCTGGGTTATGCCAACGCA
AAGATCTACAAGTGCGACAACCCCGAGTGCCCTAGGCCGACATGCTTTAA
GAGCTTTAAGAGTGAGAAGGAAGTCGACCCGCCTTGTGAGAGGGATGGCT
GCGGTGGCCGCTACAGACTGTTGAGACATGTGTCTGGTAACACCCTTGAG
CCCATCCTGAACTAATTTCGTCGACTGCCCCGGTCACGATATTCTGATGA
GTACTATGTTGTCTGGTGCCGCCGTCATGGACGCTGCCCTCCTCCTTATT
GCCGGAAACGAAACTTGCCCTCAACCTCAGACTTCGGAGCACTTGGCTGC
CATCGAAATCATGAAGCTCAGCCACATCATCATTTTGCAAAACAAGGTGG
ACTTGATGAGAGAGGATGGTGCCCTGCAACATTACCAGTCGATCTTGAAG
TTCATCCGTGGTACTGTCGCCGATGGCTCTCCGATCATTCCCATTTCTGC
ACAGCTCAAGTACAACATCGATGCTGTCAACGAATACCTGGTTTCGCACA
TTCCCGTCCCCGTCCGCGATTTCACCGCTTCCCCCCACATGATCGTCATT
CGTTCCTTCGATGTGAACAAGCCTGGTGCCGAAATTGAGGAGCTGAAGGG
TGGTGTTGCCGGTGGTTCGATCTTGACTGGTGTTCTGAAGCAGAACGACG
AGATTGAGATTCGTCCCGGTCTGGTCACCAAGGACGAGAACGGCAAGATT
CAGTGCCGTCCCATCTTCTCTCGGGTCATGTCCCTCTTTGCCGAGCACAA
CGACCTCAAGTTTGCCGTCCCTGGTGGTTTGATTGGTGTCGGTACTCGTG
TAGACCCTACTCTGTGCCGTGCTGATCGTCTCGTTGGTTTCGTCCTGGGT
CACCGCGGACGCCTTCCCGCTATCTACACTGAGTTGGAAGTCAACTACTT
CTTGCTTCGTCGTCTGCTCGGTGTCAAGACTGCCGATGGCAAGCAGGCCA
AGGTTGCCAAGCTTACTAAGAACGAGGTTCTCATGGTCAACATCGGTTCT
ACGGCTACCGGAGCTAAGGTCGTGGGTGTCAAGGCTGATGCTGCCAAGCT
CAGCTTGACCAGCCCTGCCTGTACCGAGGTCGGAGAGAAGATTGCCATCA
GTCGGAGAATTGAGAAGCACTGGCGTCTGATCGGTTGGGCCAACATTGTC
GCATGGCTGCCAACGGCGACTTCTCTGACGACGAGTCCCAGCCTGGATCC
CCCATGCTCGATGCGAACGGTCACGATGACATCGAAGAGCAAGAGCCCCT
CGACCAGGAGGCCAAGCCTCTGAAGTCTGCGATGAAGAAGGAAGTTCCTC
CTCCCCAGCCCAAGCGGCCAGAGCTGCCCGAGCAGCCGAATCCGGAGACT
CTGGACCTGTCCACCCTGACTCCTTTGACCCCCGAAATTATTGCGCGCCA
AGCCACAATCAACATTGGCACCATCGGTCACGTCGCTCACGGCAAGTCGA
CGGTCGTTAAGGCTATCTCCGAGGTCCAGACTGTCCGTTTCAAGAACGAG
TTGGAGCGAAACATTACGATCAAGCTGGGTTATGCCAACGCAAAGATCTA
CAAGTGCGACAACCCCGAGTGCCCTAGGCCGACATGCTTTAAGAGCTTTA
AGAGTGAGAAGGAAGTCGACCCGCCTTGTGAGAGGGATGGCTGCGGTGGC
CGCTACAGACTGTTGAGACATGTGTC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
GCD11M747DRAFT_27828Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_27828-T1M747DRAFT_27828-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_27828-T1.cdsM747DRAFT_27828-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_27828-T1.utr3p1M747DRAFT_27828-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_27828-T1.exon3M747DRAFT_27828-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_27828-T1.exon2M747DRAFT_27828-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_27828-T1.exon1M747DRAFT_27828-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_27828-T1.utr5p1M747DRAFT_27828-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09261TPN
DBxrefInterPro:IPR009001
DBxrefInterPro:IPR009000
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR004161
DBxrefInterPro:IPR015256
DBxrefInterPro:IPR000795
DBxrefPFAM:PF03144
DBxrefPFAM:PF00009
DBxrefPFAM:PF09173
Producteukaryotic translation initiation factor 2 subunit gamma
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851912.1supercontigKZ851912.1:242576..244541 -
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