You are here

Home

M747DRAFT_278666-T1, M747DRAFT_278666-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_278666-T1
Unique NameM747DRAFT_278666-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851911.1:556369..558153-

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_278666-T1 ID=M747DRAFT_278666-T1|Name=M747DRAFT_278666-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1785bp|location=Sequence derived from alignment at KZ851911.1:556369..558153- (Aspergillus niger ATCC 13496)
TTCCCATTCAATATTGGTTACAGAGCAAATTTTGCACTATCTTTACAAGC
ATCAATTCAGACCAACTTCATGATGTCCCTAGTCCTCGACTCCGTGATCC
CACGCCCTGCCACAGACGACTACTACAACCTTGGCACATACAGTCGACCC
ATCATCACTACGAATCAAGATGCGCAGATCTGGTTTGACCGCGGCCTCAT
TTGGTGCTACGCCTTCAATCACGCCGAAGGCTATCGATGCTTTGAACAGG
CAATAGCCCAAGACCGCAACTGCGCCATCGCCTACTGGGGCCTAGCTTAC
GCAATGGGACCAAACTATAACAAAGCCTGGCGTCTGTTCGATCCAGTGGA
CCTCAAGAATAGCATGAAGCTGTGCCATGAGGCTGCACAGAAAGCTTTAG
AGCTCTCTCAAATAGCGTCCGTTACGCCCGTCGAGCGCGCACTTATAGAA
GCTATGCAAACTCGCTTCCCCGTTGACCATCCTGCCGAAGACTACGACCA
GATCAACCACGCCTACGATGCAGCAATGAAGAAGGTCTATGATCAGTTCC
CAACTGATCTCGATGTCATGGCTCTTTACATAGACGCAAAGATGCATACG
GCCCAGCGCAAGATGTTCCACATCAAGACTGGTCTCCCCATCGAGACGTC
TCCCGTTTACGACGTGCAGAAGCTCTTCAGAGATGGCTTGGCCCTTCCTG
GCGCAGATACTCATCCGGGTCTGCTTCATTTCTGTATTCATTTCTGGGAA
ATGTCCGCCACTCCGGCCGTTGCGCTCCCACCAGCAGACGCTCTGCGCCA
TCTTGTCCCTGACGCTGGGCACCTGCATCACATGCCTTCTCATCTCGATG
TTCTGGTTGGCGATTACCGTCGCTCGGTCGACTCAAATACTGCCGCAGTT
CAAGCAGACGAGGAATTTCTCGCCCGTGAAGGCGCAAAGAACATGTACAG
CTTCTACCGTCTTCACAACTACCATTCGCTCGTGTACGCGGCAATGCTCT
CCGGTCAATCCAAAATCGCTCTAAGAGCTGTAGACCAGATGGAAGCATCG
ATCACAGACGACGTACTTCGGGTAGACTCCCCTCCACTAGCAGACTGGCT
CGAGTTCTTCAAGTCAGTACGCGTTCATGTCTACGTCCGCTTCGGGCTCT
GGAAGGAGCTCAAGGCACTCCCAATCCCTGAAGATCAGGACCTCTACTGC
GTCACCACAGCCATGACACACTACGGCAAAGCGGTCGCGTTCGCAGCTAC
GAACAACGTTCCGGAAGCACTGAAGGAACGCACTCTCTTCCAAGCGGCCG
CTAAACGCGTTCCTCCCAGCCGGAAAGACTACCCGAACCTGATCATTGAT
ATTCTAAAGGTTGCAACCGCTATGCTAGACGGCGAGATCGAGTACCGTCG
AGGGAACTTTACGCAGGCGTTTGAGAGTCTGCGGGAAGCGATTCGTCATG
ACGATGCGCTGATGTATACCGAACCTTGGGGCTGGATGTTACCTACGCGA
CATGCGTATGCGGCCTTGTCGCTGGAGCAGGGTCATGTGGAGGAAGCTGC
GAGGGCGTATGCGGAGGATTTGGGTCTTGATGCGGAAATTACTCGAGCGC
ATCAGCATCCGAATAATGTGTGGGCGCTGCATGGGTATCATGAGTGTTTG
ATGAGGTTGGGACGCGGAGCAGAGGCACTTATCATTAAACAGCAGCTGGA
TGTTGCTTTGAGTGTGGCTGATGTGGATATTAAGTCTTCGTGCTTTTGTC
GGCTGGGTGTGCAGGGATCGCAGTGTTGTTCGTGA
back to top

Coding sequence (CDS) from alignment at KZ851911.1:556369..558153-

>M747DRAFT_278666-T1 ID=M747DRAFT_278666-T1|Name=M747DRAFT_278666-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1716bp|location=Sequence derived from alignment at KZ851911.1:556369..558153- (Aspergillus niger ATCC 13496)
ATGATGTCCCTAGTCCTCGACTCCGTGATCCCACGCCCTGCCACAGACGA
CTACTACAACCTTGGCACATACAGTCGACCCATCATCACTACGAATCAAG
ATGCGCAGATCTGGTTTGACCGCGGCCTCATTTGGTGCTACGCCTTCAAT
CACGCCGAAGGCTATCGATGCTTTGAACAGGCAATAGCCCAAGACCGCAA
CTGCGCCATCGCCTACTGGGGCCTAGCTTACGCAATGGGACCAAACTATA
ACAAAGCCTGGCGTCTGTTCGATCCAGTGGACCTCAAGAATAGCATGAAG
CTGTGCCATGAGGCTGCACAGAAAGCTTTAGAGCTCTCTCAAATAGCGTC
CGTTACGCCCGTCGAGCGCGCACTTATAGAAGCTATGCAAACTCGCTTCC
CCGTTGACCATCCTGCCGAAGACTACGACCAGATCAACCACGCCTACGAT
GCAGCAATGAAGAAGGTCTATGATCAGTTCCCAACTGATCTCGATGTCAT
GGCTCTTTACATAGACGCAAAGATGCATACGGCCCAGCGCAAGATGTTCC
ACATCAAGACTGGTCTCCCCATCGAGACGTCTCCCGTTTACGACGTGCAG
AAGCTCTTCAGAGATGGCTTGGCCCTTCCTGGCGCAGATACTCATCCGGG
TCTGCTTCATTTCTGTATTCATTTCTGGGAAATGTCCGCCACTCCGGCCG
TTGCGCTCCCACCAGCAGACGCTCTGCGCCATCTTGTCCCTGACGCTGGG
CACCTGCATCACATGCCTTCTCATCTCGATGTTCTGGTTGGCGATTACCG
TCGCTCGGTCGACTCAAATACTGCCGCAGTTCAAGCAGACGAGGAATTTC
TCGCCCGTGAAGGCGCAAAGAACATGTACAGCTTCTACCGTCTTCACAAC
TACCATTCGCTCGTGTACGCGGCAATGCTCTCCGGTCAATCCAAAATCGC
TCTAAGAGCTGTAGACCAGATGGAAGCATCGATCACAGACGACGTACTTC
GGGTAGACTCCCCTCCACTAGCAGACTGGCTCGAGTTCTTCAAGTCAGTA
CGCGTTCATGTCTACGTCCGCTTCGGGCTCTGGAAGGAGCTCAAGGCACT
CCCAATCCCTGAAGATCAGGACCTCTACTGCGTCACCACAGCCATGACAC
ACTACGGCAAAGCGGTCGCGTTCGCAGCTACGAACAACGTTCCGGAAGCA
CTGAAGGAACGCACTCTCTTCCAAGCGGCCGCTAAACGCGTTCCTCCCAG
CCGGAAAGACTACCCGAACCTGATCATTGATATTCTAAAGGTTGCAACCG
CTATGCTAGACGGCGAGATCGAGTACCGTCGAGGGAACTTTACGCAGGCG
TTTGAGAGTCTGCGGGAAGCGATTCGTCATGACGATGCGCTGATGTATAC
CGAACCTTGGGGCTGGATGTTACCTACGCGACATGCGTATGCGGCCTTGT
CGCTGGAGCAGGGTCATGTGGAGGAAGCTGCGAGGGCGTATGCGGAGGAT
TTGGGTCTTGATGCGGAAATTACTCGAGCGCATCAGCATCCGAATAATGT
GTGGGCGCTGCATGGGTATCATGAGTGTTTGATGAGGTTGGGACGCGGAG
CAGAGGCACTTATCATTAAACAGCAGCTGGATGTTGCTTTGAGTGTGGCT
GATGTGGATATTAAGTCTTCGTGCTTTTGTCGGCTGGGTGTGCAGGGATC
GCAGTGTTGTTCGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_278666M747DRAFT_278666Aspergillus niger ATCC 13496gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_278666-T1.cdsM747DRAFT_278666-T1.cdsAspergillus niger ATCC 13496CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_278666-T1.exon1M747DRAFT_278666-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_278666-T1.utr5p1M747DRAFT_278666-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_278666-T1M747DRAFT_278666-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR011990
DBxrefInterPro:IPR019734
Producttetratricopeptide repeat domain protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851911.1supercontigKZ851911.1:556369..558153 -
Powered by Drupal