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M747DRAFT_278846-T1, M747DRAFT_278846-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_278846-T1
Unique NameM747DRAFT_278846-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851912.1:48337..49277-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_278846-T1 ID=M747DRAFT_278846-T1|Name=M747DRAFT_278846-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=941bp|location=Sequence derived from alignment at KZ851912.1:48337..49277- (Aspergillus niger ATCC 13496)
AATATCGACTCAATTAACTTAACTGTAAATAATGGACCTCTTCTCCCTCG
AAAACACAACCGCCCTTGTCACCGGCGGCACCCGCGGCATCGGCCAGCAA
ATGGCCATTGCCCTCGCCGAAGCCGGCAGCGACGTGATCCTCGTCCAGGT
ATCCACTATCACTACCTACAATACACCAAACAGACAGCATCTTAAACTGA
TACAAAATAGAGAGACATATCCAACACCGAAACCAAACAACGCATCGAAT
CCCTCGGCCGCAAAGCAACCATCTACACCGCCGACCTCTCCTCCCGGGAG
TCCGTCTCACAACTTACGCCTACCCTCCTATCCGACAGCCACGACATCAG
CATCCTAGTCAACTGCGCCGGCATCCAACGCCGGCACCCCAGCCATTTAT
TCCCAGACAGCGACTGGGACGAAGTCCGTCTTCCTATTTTCCCCCTCCCC
CCTTCTCCAAGCCTCCTGCCCACTAACTGAAAGAAATATCTGCTTAGGTC
CTCCAGACAAACCTAACTACAATTTTCACCCTCTGCCGTGACCTTGGCGC
CTACATGCTCACCCGCACCCCAGACGCCACCGGCCACCGCGGCTCCATTA
TCAACGTCGCCTCGCTGGTCTCCTTCCAGGGAGGAATAACAGTTCCTGCG
TACGCGGCTGCGAAGGGCGGCGTGGCGCAACTCACGAAAGCGTTGTCGAA
TGAGTGGGCGAGCAAAGGAATTAATGTCAATGCGGTGGCGCCCGGATATG
TGGCTACGGAGATGAACACGGCGTTGTTGAATGATCAGGATCGTGCGAGG
AGTATACTTGAACGCATTCCGGCGGGGAGGTGGGGCACCGCAGAGGACTT
TAAGGGCGTTACGGTGTTCTTGGCTGGGAAGGCGAGTCGGTATGTTTCGG
GGAGTGTGTTGTTGGTTGATGGGGGGTGGATGGGGAGGTAG
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Coding sequence (CDS) from alignment at KZ851912.1:48337..49277-

>M747DRAFT_278846-T1 ID=M747DRAFT_278846-T1|Name=M747DRAFT_278846-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2322bp|location=Sequence derived from alignment at KZ851912.1:48337..49277- (Aspergillus niger ATCC 13496)
GTCCTCCAGACAAACCTAACTACAATTTTCACCCTCTGCCGTGACCTTGG
CGCCTACATGCTCACCCGCACCCCAGACGCCACCGGCCACCGCGGCTCCA
TTATCAACGTCGCCTCGCTGGTCTCCTTCCAGGGAGGAATAACAGTTCCT
GCGTACGCGGCTGCGAAGGGCGGCGTGGCGCAACTCACGAAAGCGTTGTC
GAATGAGTGGGCGAGCAAAGGAATTAATGTCAATGCGGTGGCGCCCGGAT
ATGTGGCTACGGAGATGAACACGGCGTTGTTGAATGATCAGGATCGTGCG
AGGAGTATACTTGAACGCATTCCGGCGGGGAGGTGGGGCACCGCAGAGGA
CTTTAAGGGCGTTACGGTGTTCTTGGCTGGGAAGGCGAGTCGGTATGTTT
CGGGGAGTGTGTTGTTGGTTGATGGGGGGTGGATGGGGAGGTAGAGAGAC
ATATCCAACACCGAAACCAAACAACGCATCGAATCCCTCGGCCGCAAAGC
AACCATCTACACCGCCGACCTCTCCTCCCGGGAGTCCGTCTCACAACTTA
CGCCTACCCTCCTATCCGACAGCCACGACATCAGCATCCTAGTCAACTGC
GCCGGCATCCAACGCCGGCACCCCAGCCATTTATTCCCAGACAGCGACTG
GGACGAAATGGACCTCTTCTCCCTCGAAAACACAACCGCCCTTGTCACCG
GCGGCACCCGCGGCATCGGCCAGCAAATGGCCATTGCCCTCGCCGAAGCC
GGCAGCGACGTGATCCTCGTCCAGGTCCTCCAGACAAACCTAACTACAAT
TTTCACCCTCTGCCGTGACCTTGGCGCCTACATGCTCACCCGCACCCCAG
ACGCCACCGGCCACCGCGGCTCCATTATCAACGTCGCCTCGCTGGTCTCC
TTCCAGGGAGGAATAACAGTTCCTGCGTACGCGGCTGCGAAGGGCGGCGT
GGCGCAACTCACGAAAGCGTTGTCGAATGAGTGGGCGAGCAAAGGAATTA
ATGTCAATGCGGTGGCGCCCGGATATGTGGCTACGGAGATGAACACGGCG
TTGTTGAATGATCAGGATCGTGCGAGGAGTATACTTGAACGCATTCCGGC
GGGGAGGTGGGGCACCGCAGAGGACTTTAAGGGCGTTACGGTGTTCTTGG
CTGGGAAGGCGAGTCGGTATGTTTCGGGGAGTGTGTTGTTGGTTGATGGG
GGGTGGATGGGGAGGTAGAGAGACATATCCAACACCGAAACCAAACAACG
CATCGAATCCCTCGGCCGCAAAGCAACCATCTACACCGCCGACCTCTCCT
CCCGGGAGTCCGTCTCACAACTTACGCCTACCCTCCTATCCGACAGCCAC
GACATCAGCATCCTAGTCAACTGCGCCGGCATCCAACGCCGGCACCCCAG
CCATTTATTCCCAGACAGCGACTGGGACGAAATGGACCTCTTCTCCCTCG
AAAACACAACCGCCCTTGTCACCGGCGGCACCCGCGGCATCGGCCAGCAA
ATGGCCATTGCCCTCGCCGAAGCCGGCAGCGACGTGATCCTCGTCCAGGT
CCTCCAGACAAACCTAACTACAATTTTCACCCTCTGCCGTGACCTTGGCG
CCTACATGCTCACCCGCACCCCAGACGCCACCGGCCACCGCGGCTCCATT
ATCAACGTCGCCTCGCTGGTCTCCTTCCAGGGAGGAATAACAGTTCCTGC
GTACGCGGCTGCGAAGGGCGGCGTGGCGCAACTCACGAAAGCGTTGTCGA
ATGAGTGGGCGAGCAAAGGAATTAATGTCAATGCGGTGGCGCCCGGATAT
GTGGCTACGGAGATGAACACGGCGTTGTTGAATGATCAGGATCGTGCGAG
GAGTATACTTGAACGCATTCCGGCGGGGAGGTGGGGCACCGCAGAGGACT
TTAAGGGCGTTACGGTGTTCTTGGCTGGGAAGGCGAGTCGGTATGTTTCG
GGGAGTGTGTTGTTGGTTGATGGGGGGTGGATGGGGAGGTAGAGAGACAT
ATCCAACACCGAAACCAAACAACGCATCGAATCCCTCGGCCGCAAAGCAA
CCATCTACACCGCCGACCTCTCCTCCCGGGAGTCCGTCTCACAACTTACG
CCTACCCTCCTATCCGACAGCCACGACATCAGCATCCTAGTCAACTGCGC
CGGCATCCAACGCCGGCACCCCAGCCATTTATTCCCAGACAGCGACTGGG
ACGAAATGGACCTCTTCTCCCTCGAAAACACAACCGCCCTTGTCACCGGC
GGCACCCGCGGCATCGGCCAGCAAATGGCCATTGCCCTCGCCGAAGCCGG
CAGCGACGTGATCCTCGTCCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_278846M747DRAFT_278846Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_278846-T1M747DRAFT_278846-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_278846-T1.cdsM747DRAFT_278846-T1.cdsAspergillus niger ATCC 13496CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_278846-T1.exon3M747DRAFT_278846-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_278846-T1.exon2M747DRAFT_278846-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_278846-T1.exon1M747DRAFT_278846-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_278846-T1.utr5p1M747DRAFT_278846-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR020904
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF01370
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Product2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851912.1supercontigKZ851912.1:48337..49277 -
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