You are here

Home

M747DRAFT_279279-T1, M747DRAFT_279279-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_279279-T1
Unique NameM747DRAFT_279279-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851913.1:14665..15951-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_279279-T1 ID=M747DRAFT_279279-T1|Name=M747DRAFT_279279-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1287bp|location=Sequence derived from alignment at KZ851913.1:14665..15951- (Aspergillus niger ATCC 13496)
ATGTCGCCCAACACCGCAGACGACGCTCTTTCATATAATTTTCAGAAGGC
ATGCATTGATGGTAACCTTCGGGCAGTCCAGAGGGCTCTCGCCAGCGGAA
GACTCTCTGCTAAGGATCTTGACACTGGACTAAGGATCAGTACTAAAGAG
GCACATCCGGACATAGTAGCAGCTCTCTTTGAGGCAGGTGTGCCTATGTC
GCCAAATGCAATAGGCTGCCTCTGTGGGAATGATGCGAAACAGGACCCGC
GCGTCATTCGCCTCTACTTCGATCGTGGTCTGAAGCCTAGTGATTGTATT
ACGACTAAAGGCGAGCCTCTTTTACGGTACTTCAATTCCCAATAATTATT
GGCCTTCATAGAGAAACTAACTGTACTGGGTAATGTAGATTTTATTCGGT
TGACTGTGCCCGGGAATTACTCGAGCGAGGCGTCGACCCCAACCGCTGCG
GTCCGAGAAAGATAAGCCCCCTCTCCAGCTCTCTTGACCTGGTTCACGAG
GACAACGGGTCTACATTCGAATTACTTGTGAAATATGGGGCGAAGATGGA
TCCCGGTCTCTTGTTTGATGCTCTTGTTTGGAGCAGCGATGCAGCTATCA
AATTTCGTTTCCTTCTCTCCAAGGGTCTTGATCCGACCACGACAATTTCT
GCAGAATGGGGCACGCCGCTACATGTTGCAGCTCTCTTCGCCGATAAGGA
GATTATTAGAATGCTTCTCGACTTGGGAGCAGATCCGAACTCCCGATCAT
ACTGTATGAAGTTCAAAAATAAAACCCCCGTGGAAGTCGCCGAGTGGAAG
ATGCGAGCTTCTCATGAAGGCTCTTCTATGAAGGGTATGTATCAAAGTGT
CATAGAGCTTCTCGGATCTACACAGATCGGAGTCTCTCTTCCTACAGTTG
CTGCGTCGGAGAGGTCAAATACCGAGAGCGATACGGAGCCCCCTGCCGCG
AATAGAACGGAAATCAACGAACGACTCAATGCTGTCGACACTGGATTGTC
AGGTTCTTTAACGGGTGACTCGAATTGGACTGGCTCCCAAAAGACCCAGA
ATACCCGGAAGACACGAATTCCAGGGGAAGGCAGCGTTAGTAGCCGGACA
CGCAGTCGTACCAAGACTGTCCCTTAGTTACGAACCTACTACGTATAAGT
GTCCGCGGTGATGGTTTAGAGAGTGATAGGTTGGCTATTCGGGGAATACC
ATTCAAAAAGCTTCCGGGCATTCTATGATGCTGTGAGTCTGTTGATCCGC
ATGTGCTTTGGAGTGAGTATGGATGGGCTACTTGGTG
back to top

Coding sequence (CDS) from alignment at KZ851913.1:14665..15951-

>M747DRAFT_279279-T1 ID=M747DRAFT_279279-T1|Name=M747DRAFT_279279-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2130bp|location=Sequence derived from alignment at KZ851913.1:14665..15951- (Aspergillus niger ATCC 13496)
ATTTTATTCGGTTGACTGTGCCCGGGAATTACTCGAGCGAGGCGTCGACC
CCAACCGCTGCGGTCCGAGAAAGATAAGCCCCCTCTCCAGCTCTCTTGAC
CTGGTTCACGAGGACAACGGGTCTACATTCGAATTACTTGTGAAATATGG
GGCGAAGATGGATCCCGGTCTCTTGTTTGATGCTCTTGTTTGGAGCAGCG
ATGCAGCTATCAAATTTCGTTTCCTTCTCTCCAAGGGTCTTGATCCGACC
ACGACAATTTCTGCAGAATGGGGCACGCCGCTACATGTTGCAGCTCTCTT
CGCCGATAAGGAGATTATTAGAATGCTTCTCGACTTGGGAGCAGATCCGA
ACTCCCGATCATACTGTATGAAGTTCAAAAATAAAACCCCCGTGGAAGTC
GCCGAGTGGAAGATGCGAGCTTCTCATGAAGGCTCTTCTATGAAGGGTAT
GTATCAAAGTGTCATAGAGCTTCTCGGATCTACACAGATCGGAGTCTCTC
TTCCTACAGTTGCTGCGTCGGAGAGGTCAAATACCGAGAGCGATACGGAG
CCCCCTGCCGCGAATAGAACGGAAATCAACGAACGACTCAATGCTGTCGA
CACTGGATTGTCAGGTTCTTTAACGGGTGACTCGAATTGGACTGGCTCCC
AAAAGACCCAGAATACCCGGAAGACACGAATTCCAGGGGAAGGCAGCGTT
AGTAGCCGGACACGCAGTCGTACCAAGACTGTCCCTTAGATGTCGCCCAA
CACCGCAGACGACGCTCTTTCATATAATTTTCAGAAGGCATGCATTGATG
GTAACCTTCGGGCAGTCCAGAGGGCTCTCGCCAGCGGAAGACTCTCTGCT
AAGGATCTTGACACTGGACTAAGGATCAGTACTAAAGAGGCACATCCGGA
CATAGTAGCAGCTCTCTTTGAGGCAGGTGTGCCTATGTCGCCAAATGCAA
TAGGCTGCCTCTGTGGGAATGATGCGAAACAGGACCCGCGCGTCATTCGC
CTCTACTTCGATCGTGGTCTGAAGCCTAGTGATTGTATTACGACTAAAGG
CGAGCCTCTTTTACGATTTTATTCGGTTGACTGTGCCCGGGAATTACTCG
AGCGAGGCGTCGACCCCAACCGCTGCGGTCCGAGAAAGATAAGCCCCCTC
TCCAGCTCTCTTGACCTGGTTCACGAGGACAACGGGTCTACATTCGAATT
ACTTGTGAAATATGGGGCGAAGATGGATCCCGGTCTCTTGTTTGATGCTC
TTGTTTGGAGCAGCGATGCAGCTATCAAATTTCGTTTCCTTCTCTCCAAG
GGTCTTGATCCGACCACGACAATTTCTGCAGAATGGGGCACGCCGCTACA
TGTTGCAGCTCTCTTCGCCGATAAGGAGATTATTAGAATGCTTCTCGACT
TGGGAGCAGATCCGAACTCCCGATCATACTGTATGAAGTTCAAAAATAAA
ACCCCCGTGGAAGTCGCCGAGTGGAAGATGCGAGCTTCTCATGAAGGCTC
TTCTATGAAGGGTATGTATCAAAGTGTCATAGAGCTTCTCGGATCTACAC
AGATCGGAGTCTCTCTTCCTACAGTTGCTGCGTCGGAGAGGTCAAATACC
GAGAGCGATACGGAGCCCCCTGCCGCGAATAGAACGGAAATCAACGAACG
ACTCAATGCTGTCGACACTGGATTGTCAGGTTCTTTAACGGGTGACTCGA
ATTGGACTGGCTCCCAAAAGACCCAGAATACCCGGAAGACACGAATTCCA
GGGGAAGGCAGCGTTAGTAGCCGGACACGCAGTCGTACCAAGACTGTCCC
TTAGATGTCGCCCAACACCGCAGACGACGCTCTTTCATATAATTTTCAGA
AGGCATGCATTGATGGTAACCTTCGGGCAGTCCAGAGGGCTCTCGCCAGC
GGAAGACTCTCTGCTAAGGATCTTGACACTGGACTAAGGATCAGTACTAA
AGAGGCACATCCGGACATAGTAGCAGCTCTCTTTGAGGCAGGTGTGCCTA
TGTCGCCAAATGCAATAGGCTGCCTCTGTGGGAATGATGCGAAACAGGAC
CCGCGCGTCATTCGCCTCTACTTCGATCGTGGTCTGAAGCCTAGTGATTG
TATTACGACTAAAGGCGAGCCTCTTTTACG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_279279M747DRAFT_279279Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_279279-T1M747DRAFT_279279-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_279279-T1.cdsM747DRAFT_279279-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_279279-T1.utr3p1M747DRAFT_279279-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_279279-T1.exon2M747DRAFT_279279-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_279279-T1.exon1M747DRAFT_279279-T1.exon1Aspergillus niger ATCC 13496exon


Properties
Property NameValue
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR002110
DBxrefPFAM:PF13606
DBxrefPFAM:PF00023
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851913.1supercontigKZ851913.1:14665..15951 -
Powered by Drupal