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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851914.1:430741..431462- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_279979-T1 ID=M747DRAFT_279979-T1|Name=M747DRAFT_279979-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=722bp|location=Sequence derived from alignment at KZ851914.1:430741..431462- (Aspergillus niger ATCC 13496)
CCTCTTGTCTTGCCGCATGCATCTTGCCTACTTCCCAACACCCTCTCACC
CTCCCTACCTTGTCTATCAACTCCGACCCTGAAAATCAAAAAGGGAAATA
AAGATGTCCTTCTACGTCGCCCCCAGCCAGCAGCGCACTCTCCGCGCCTG
CATGGTGTGCTCGCTCGTTCAACTGCACAGCGTACGTTCAGCTGCTACCT
CCCAATTAAAACCAACCCAACCTAACCCGAACAACAACTAACATTTTCTC
CTTTCTTACTGCTTAGAAATTCATGCGCGAAGGCTGTCCCAACTGCGACA
ATGTCCTCGGCCTCCGCGGCAACAACGACGCGATCCAAGAATGCACGTCG
CAGGTCTTCGAGGGCCTGGTGACGCTCCGCGATCCCACAACGAGCTGGGT
GGCTAGGTGGCAGAGATTGGATAGTTATGTGCCGGGGACGTATGCGGTTA
AGGTTACGGGATCGGTGAGTACTCTCGCCCACCCATACTGAACTTCAATT
ATGTCCGGGGGTGGTGGTGAAGAGAATATTGGGCTAACGGTGATGGGTGA
ACAGCTTCCCGATGAGATTATTTCCAGTTTGGAGGATTCGGGTGTCAAGT
ATATTCCGTATGTTGCCCTTCTATTCCTTCTTTGCATGTCTTTGCGTTGT
GTGTTGCGTGTTGGATTAATTGATGAGTGCTGATTATTATGTGTCTCGAT
ACAGGAGGGATGGTAGCACGGG back to topCoding sequence (CDS) from alignment at KZ851914.1:430741..431462- >M747DRAFT_279979-T1 ID=M747DRAFT_279979-T1|Name=M747DRAFT_279979-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1215bp|location=Sequence derived from alignment at KZ851914.1:430741..431462- (Aspergillus niger ATCC 13496)
CTTCCCGATGAGATTATTTCCAGTTTGGAGGATTCGGGTGTCAAGTATAT
TCCGTATGTTGCCCTTCTATTCCTTCTTTGCATGTCTTTGCGTTGTGTGT
TGCGTGTTGGATTAATTGATGAGTGCTGAAAATTCATGCGCGAAGGCTGT
CCCAACTGCGACAATGTCCTCGGCCTCCGCGGCAACAACGACGCGATCCA
AGAATGCACGTCGCAGGTCTTCGAGGGCCTGGTGACGCTCCGCGATCCCA
CAACGAGCTGGGTGGCTAGGTGGCAGAGATTGGATAGTTATGTGCCGGGG
ACGTATGCGGTTAAGGTTACGGGATCGATGTCCTTCTACGTCGCCCCCAG
CCAGCAGCGCACTCTCCGCGCCTGCATGGTGTGCTCGCTCGTTCAACTGC
ACAGCCTTCCCGATGAGATTATTTCCAGTTTGGAGGATTCGGGTGTCAAG
TATATTCCGTATGTTGCCCTTCTATTCCTTCTTTGCATGTCTTTGCGTTG
TGTGTTGCGTGTTGGATTAATTGATGAGTGCTGAAAATTCATGCGCGAAG
GCTGTCCCAACTGCGACAATGTCCTCGGCCTCCGCGGCAACAACGACGCG
ATCCAAGAATGCACGTCGCAGGTCTTCGAGGGCCTGGTGACGCTCCGCGA
TCCCACAACGAGCTGGGTGGCTAGGTGGCAGAGATTGGATAGTTATGTGC
CGGGGACGTATGCGGTTAAGGTTACGGGATCGATGTCCTTCTACGTCGCC
CCCAGCCAGCAGCGCACTCTCCGCGCCTGCATGGTGTGCTCGCTCGTTCA
ACTGCACAGCCTTCCCGATGAGATTATTTCCAGTTTGGAGGATTCGGGTG
TCAAGTATATTCCGTATGTTGCCCTTCTATTCCTTCTTTGCATGTCTTTG
CGTTGTGTGTTGCGTGTTGGATTAATTGATGAGTGCTGAAAATTCATGCG
CGAAGGCTGTCCCAACTGCGACAATGTCCTCGGCCTCCGCGGCAACAACG
ACGCGATCCAAGAATGCACGTCGCAGGTCTTCGAGGGCCTGGTGACGCTC
CGCGATCCCACAACGAGCTGGGTGGCTAGGTGGCAGAGATTGGATAGTTA
TGTGCCGGGGACGTATGCGGTTAAGGTTACGGGATCGATGTCCTTCTACG
TCGCCCCCAGCCAGCAGCGCACTCTCCGCGCCTGCATGGTGTGCTCGCTC
GTTCAACTGCACAGC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265BBJ |
| DBxref | InterPro:IPR029040 |
| DBxref | InterPro:IPR038510 |
| DBxref | InterPro:IPR022800 |
| DBxref | PFAM:PF06093 |
| Product | transcription elongation factor spt4 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851914.1 | supercontig | KZ851914.1:430741..431462 - |
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