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M747DRAFT_282673-T1, M747DRAFT_282673-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_282673-T1
Unique NameM747DRAFT_282673-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851921.1:559969..561094-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_282673-T1 ID=M747DRAFT_282673-T1|Name=M747DRAFT_282673-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1126bp|location=Sequence derived from alignment at KZ851921.1:559969..561094- (Aspergillus niger ATCC 13496)
ATGTATCGACTCCTATCAGTTGCCTCGGTTCCTCTGCTGGCCAGCCTCGT
GCATGGCTATGCTGACCCCGGAGCATGCTCGGGTGTTTGTACCACCCATG
ACCCCGGTTTGATCCGGAGAGAGTCGGACGGTACATACTTCCTCTTCTCT
ACAGGAAACAAAATCTCCTACGTCTCTGCCTCATCCATCGAAGGACCATG
GACCAGCGTTGGGTCTATGCTGCCGGATGGATCGTCCATCGATCTCGATG
GCAACGATGATCTTTGGGTAACTATGTCCCACTGCAAACATGATTGGCCT
GTCTGACACTAGCCCAGGCCCCGGATGTCTCCTATGTAGATGGTCTCTAT
TATGTATACTACGCTGTGTCGACCTTTGGATCCCAAGATTCCGCCATCGG
ACTTGCAACGTCCGAGACGATGGAATATGGCTCTTGGACGGATCATGGCT
CCACTGGCATTGCGTCTTCCTCAGCCAAGATTTATAATGCGATCGACCCC
AACCTGATCTACGCCGATGGCACCTACTACATCAACTTTGGGTCGTTCTG
GGATGACATTTACCAAGTCCCGATGAAGTCGACCCCAACGGCAGCTGCCT
CTTCCTCCTACAATCTTGCGTATGACCCGTCGGGTACCCATGCGGAGGAG
GGTTCCTATATGTTTCAGTACGGTGACTACTACTACCTCTTTTACTCGGC
AGGTATCTGCTGTGGATACGATACATCCATGCCCGCTTCCGGAGAGGAGT
ATCATATCAAGGTCTGCCGTTCGACTTCGCCCACGGGTGATTTCGTAAGT
ATATCCGACATTTAGAGAAAATACTAAGTAGGGAAAGCTAACCTGGTGCT
AAGGTTGACTCCGACGGTACGGCGTGCACGGATGGCGGGGGCACGATGGT
GCTCGAAAGCCATGGAGAAGTCTATGGCCCTGGCGGACAGTAAGTGATTC
TGCAGCTGCCCCACCGATATTTATGCTTATCATGTTTTAGGGGTGTGTAT
GACGATCCCAACCTTGGTCCGGTTCTTTACTACCACTACATGAACACCAC
GATTGGATACGCGGATTCTGACGCGCAGTTTGGGTGGAACACGATCGACT
TCTCTAGCGGATGGCCGGTTGTATAA
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Coding sequence (CDS) from alignment at KZ851921.1:559969..561094-

>M747DRAFT_282673-T1 ID=M747DRAFT_282673-T1|Name=M747DRAFT_282673-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3864bp|location=Sequence derived from alignment at KZ851921.1:559969..561094- (Aspergillus niger ATCC 13496)
GGGTGTGTATGACGATCCCAACCTTGGTCCGGTTCTTTACTACCACTACA
TGAACACCACGATTGGATACGCGGATTCTGACGCGCAGTTTGGGTGGAAC
ACGATCGACTTCTCTAGCGGATGGCCGGTTGTATAAGTTGACTCCGACGG
TACGGCGTGCACGGATGGCGGGGGCACGATGGTGCTCGAAAGCCATGGAG
AAGTCTATGGCCCTGGCGGACAGCCCCGGATGTCTCCTATGTAGATGGTC
TCTATTATGTATACTACGCTGTGTCGACCTTTGGATCCCAAGATTCCGCC
ATCGGACTTGCAACGTCCGAGACGATGGAATATGGCTCTTGGACGGATCA
TGGCTCCACTGGCATTGCGTCTTCCTCAGCCAAGATTTATAATGCGATCG
ACCCCAACCTGATCTACGCCGATGGCACCTACTACATCAACTTTGGGTCG
TTCTGGGATGACATTTACCAAGTCCCGATGAAGTCGACCCCAACGGCAGC
TGCCTCTTCCTCCTACAATCTTGCGTATGACCCGTCGGGTACCCATGCGG
AGGAGGGTTCCTATATGTTTCAGTACGGTGACTACTACTACCTCTTTTAC
TCGGCAGGTATCTGCTGTGGATACGATACATCCATGCCCGCTTCCGGAGA
GGAGTATCATATCAAGGTCTGCCGTTCGACTTCGCCCACGGGTGATTTCA
TGTATCGACTCCTATCAGTTGCCTCGGTTCCTCTGCTGGCCAGCCTCGTG
CATGGCTATGCTGACCCCGGAGCATGCTCGGGTGTTTGTACCACCCATGA
CCCCGGTTTGATCCGGAGAGAGTCGGACGGTACATACTTCCTCTTCTCTA
CAGGAAACAAAATCTCCTACGTCTCTGCCTCATCCATCGAAGGACCATGG
ACCAGCGTTGGGTCTATGCTGCCGGATGGATCGTCCATCGATCTCGATGG
CAACGATGATCTTTGGGGGTGTGTATGACGATCCCAACCTTGGTCCGGTT
CTTTACTACCACTACATGAACACCACGATTGGATACGCGGATTCTGACGC
GCAGTTTGGGTGGAACACGATCGACTTCTCTAGCGGATGGCCGGTTGTAT
AAGTTGACTCCGACGGTACGGCGTGCACGGATGGCGGGGGCACGATGGTG
CTCGAAAGCCATGGAGAAGTCTATGGCCCTGGCGGACAGCCCCGGATGTC
TCCTATGTAGATGGTCTCTATTATGTATACTACGCTGTGTCGACCTTTGG
ATCCCAAGATTCCGCCATCGGACTTGCAACGTCCGAGACGATGGAATATG
GCTCTTGGACGGATCATGGCTCCACTGGCATTGCGTCTTCCTCAGCCAAG
ATTTATAATGCGATCGACCCCAACCTGATCTACGCCGATGGCACCTACTA
CATCAACTTTGGGTCGTTCTGGGATGACATTTACCAAGTCCCGATGAAGT
CGACCCCAACGGCAGCTGCCTCTTCCTCCTACAATCTTGCGTATGACCCG
TCGGGTACCCATGCGGAGGAGGGTTCCTATATGTTTCAGTACGGTGACTA
CTACTACCTCTTTTACTCGGCAGGTATCTGCTGTGGATACGATACATCCA
TGCCCGCTTCCGGAGAGGAGTATCATATCAAGGTCTGCCGTTCGACTTCG
CCCACGGGTGATTTCATGTATCGACTCCTATCAGTTGCCTCGGTTCCTCT
GCTGGCCAGCCTCGTGCATGGCTATGCTGACCCCGGAGCATGCTCGGGTG
TTTGTACCACCCATGACCCCGGTTTGATCCGGAGAGAGTCGGACGGTACA
TACTTCCTCTTCTCTACAGGAAACAAAATCTCCTACGTCTCTGCCTCATC
CATCGAAGGACCATGGACCAGCGTTGGGTCTATGCTGCCGGATGGATCGT
CCATCGATCTCGATGGCAACGATGATCTTTGGGGGTGTGTATGACGATCC
CAACCTTGGTCCGGTTCTTTACTACCACTACATGAACACCACGATTGGAT
ACGCGGATTCTGACGCGCAGTTTGGGTGGAACACGATCGACTTCTCTAGC
GGATGGCCGGTTGTATAAGTTGACTCCGACGGTACGGCGTGCACGGATGG
CGGGGGCACGATGGTGCTCGAAAGCCATGGAGAAGTCTATGGCCCTGGCG
GACAGCCCCGGATGTCTCCTATGTAGATGGTCTCTATTATGTATACTACG
CTGTGTCGACCTTTGGATCCCAAGATTCCGCCATCGGACTTGCAACGTCC
GAGACGATGGAATATGGCTCTTGGACGGATCATGGCTCCACTGGCATTGC
GTCTTCCTCAGCCAAGATTTATAATGCGATCGACCCCAACCTGATCTACG
CCGATGGCACCTACTACATCAACTTTGGGTCGTTCTGGGATGACATTTAC
CAAGTCCCGATGAAGTCGACCCCAACGGCAGCTGCCTCTTCCTCCTACAA
TCTTGCGTATGACCCGTCGGGTACCCATGCGGAGGAGGGTTCCTATATGT
TTCAGTACGGTGACTACTACTACCTCTTTTACTCGGCAGGTATCTGCTGT
GGATACGATACATCCATGCCCGCTTCCGGAGAGGAGTATCATATCAAGGT
CTGCCGTTCGACTTCGCCCACGGGTGATTTCATGTATCGACTCCTATCAG
TTGCCTCGGTTCCTCTGCTGGCCAGCCTCGTGCATGGCTATGCTGACCCC
GGAGCATGCTCGGGTGTTTGTACCACCCATGACCCCGGTTTGATCCGGAG
AGAGTCGGACGGTACATACTTCCTCTTCTCTACAGGAAACAAAATCTCCT
ACGTCTCTGCCTCATCCATCGAAGGACCATGGACCAGCGTTGGGTCTATG
CTGCCGGATGGATCGTCCATCGATCTCGATGGCAACGATGATCTTTGGGG
GTGTGTATGACGATCCCAACCTTGGTCCGGTTCTTTACTACCACTACATG
AACACCACGATTGGATACGCGGATTCTGACGCGCAGTTTGGGTGGAACAC
GATCGACTTCTCTAGCGGATGGCCGGTTGTATAAGTTGACTCCGACGGTA
CGGCGTGCACGGATGGCGGGGGCACGATGGTGCTCGAAAGCCATGGAGAA
GTCTATGGCCCTGGCGGACAGCCCCGGATGTCTCCTATGTAGATGGTCTC
TATTATGTATACTACGCTGTGTCGACCTTTGGATCCCAAGATTCCGCCAT
CGGACTTGCAACGTCCGAGACGATGGAATATGGCTCTTGGACGGATCATG
GCTCCACTGGCATTGCGTCTTCCTCAGCCAAGATTTATAATGCGATCGAC
CCCAACCTGATCTACGCCGATGGCACCTACTACATCAACTTTGGGTCGTT
CTGGGATGACATTTACCAAGTCCCGATGAAGTCGACCCCAACGGCAGCTG
CCTCTTCCTCCTACAATCTTGCGTATGACCCGTCGGGTACCCATGCGGAG
GAGGGTTCCTATATGTTTCAGTACGGTGACTACTACTACCTCTTTTACTC
GGCAGGTATCTGCTGTGGATACGATACATCCATGCCCGCTTCCGGAGAGG
AGTATCATATCAAGGTCTGCCGTTCGACTTCGCCCACGGGTGATTTCATG
TATCGACTCCTATCAGTTGCCTCGGTTCCTCTGCTGGCCAGCCTCGTGCA
TGGCTATGCTGACCCCGGAGCATGCTCGGGTGTTTGTACCACCCATGACC
CCGGTTTGATCCGGAGAGAGTCGGACGGTACATACTTCCTCTTCTCTACA
GGAAACAAAATCTCCTACGTCTCTGCCTCATCCATCGAAGGACCATGGAC
CAGCGTTGGGTCTATGCTGCCGGATGGATCGTCCATCGATCTCGATGGCA
ACGATGATCTTTGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0046558arabinan endo-1,5-alpha-L-arabinosidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_282673M747DRAFT_282673Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_282673-T1M747DRAFT_282673-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_282673-T1.cdsM747DRAFT_282673-T1.cdsAspergillus niger ATCC 13496CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_282673-T1.exon4M747DRAFT_282673-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_282673-T1.exon3M747DRAFT_282673-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_282673-T1.exon2M747DRAFT_282673-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_282673-T1.exon1M747DRAFT_282673-T1.exon1Aspergillus niger ATCC 13496exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-19)
NoteCAZy:GH43_8
NoteCAZy:GH43_30
NoteCAZy:GH43_7
NoteCAZy:GH43_4
NoteCAZy:GH43_3
NoteCAZy:GH43
NoteCAZy:GH43_5
NoteCAZy:GH43_6
DBxrefInterPro:IPR006710
DBxrefInterPro:IPR016840
DBxrefInterPro:IPR023296
DBxrefPFAM:PF04616
Product5-alpha-arabinanase abnA
Productendo 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851921.1supercontigKZ851921.1:559969..561094 -
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