|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851924.1:357637..359239+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_283382-T1 ID=M747DRAFT_283382-T1|Name=M747DRAFT_283382-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1603bp|location=Sequence derived from alignment at KZ851924.1:357637..359239+ (Aspergillus niger ATCC 13496)
GGCCGTGCGATAGTGGGTTAGACTAAGGCTGCTGTCGCTGCTGCTGTTGC
TGTCGTTGTTGTTGCTGTTGCTGTGCCGCCGGTCGGATCATGTTGCGTTG
GTTATGACGGGGTTTGTCCTGAAGCTAGCATTACACTCTTCATTCTATAT
TCCCGACTTGCCGGAGACTTATCGTCGTTATCGGTGTCGTTGATCAACCT
CTTTCTGCTTTCTACACACACACACACATCACTCGCAACCAACCTACCTA
CCTATATACACCCTCATATTATCGTAATCCATCATCCATGGCCACCTCAA
CCGGTACCGGCTGGGCTCAGCTCCGGCAGCAAGCCCGATCTCTCGAGACT
CAGGTACGAGCATCGCTTCCCTGTCATACGGAATGGAAATCCTAACAATG
TGTATACATGATCATAGACCGAGAACCTCTTCCACACATACTCTCAATAT
GCTTCGTTAACGAAGCTCCCACCCACACCCTCGGATGAAGAACAGCGGAT
CGAATCGCAGCTCAAAGACCTCCTAGAACGAGTACGCATCCACTATGCCC
ATTCCATCACAGTTACCATCCTAATACCACAATCACATGAACTAATCTAA
TGGATCAATCACCAGCGCGACTCTCTGATCTCCCAACTCGCCCGCCTCCT
CGACTCCGAAGCAACCCTCACCTCCTCCGCCCTCAAACAAAACAACCTCG
CCCGCCACCGCGAAGTCCTCCACGACCACCGTCGTGAACTACAGCGTCTC
AAATCTGCCATCGCCGAATCCCGCGACCGCGCTAATCTCCTCTCCAACGT
CCGCTCCGATATCGATGCCTACCGCAACTCGAACCCGGGTCAGGCAGAAG
CAGATTACATGCTTGAAGAGCGGGGTCGGATTGATGAGAGCCATAATATG
ATTGATGGGGTGTTGAGTCAGGCTTACGCTATTAATGAGAACTTCGGTCT
GCAGCGTGAGACGCTGGCTAGTATCAACCGACGCATTGTGGGCGCGGCGA
ACTCAGTGCCGGGCATGAATGCGTTGATTGGGAAGATTGGGTCTAAGAGG
AGACGGGATGCGTTGATTTTGGGGGCTTTTATTGGGTTTTGCTTTTTGAT
GTTGCTTTGGTTGAGGTGAGGGTTGCTTTACTTTGTTTAAAGCATGTTGT
GTCTGTGTTTGTTGTCTGCGTTGTCTATTGTGGGTTTGGGATGGGCGTTT
GGAGGAGTGAGATTTGTCTCTTTCTTCTATTCTTTCCTTTGTCTATGCGC
TGTCGTTGCGTCTATACTATACAGAGATTAATGGTGGGGGGAGATTTGTT
TCCTGGTGTCCGTGGTGTTTGGAGCATATTCCACTCTCACTCACACTCAC
GCAAACACCCTGGTATGTACATACACAAAGTCCAGAATCCAGTATAAACT
GGTGATCCCGTACCTGTCCAGCCATGGCACACCAAACCCATCTAGGGCAT
AACAACACGAGGCTTCTTCACAGCTTCACCCTGACCCCTCGCAGCATCCC
ACTCCTGCGCCGGCATCTCCGACTGCAAACTGACCTTCTTCTCCTGCACC
AACTTGCGCACCCCATTATTCAGTGCCTCCCACTCCTCCTTCTCAGCAGG
CCC back to topCoding sequence (CDS) from alignment at KZ851924.1:357637..359239+ >M747DRAFT_283382-T1 ID=M747DRAFT_283382-T1|Name=M747DRAFT_283382-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2052bp|location=Sequence derived from alignment at KZ851924.1:357637..359239+ (Aspergillus niger ATCC 13496)
ATGGCCACCTCAACCGGTACCGGCTGGGCTCAGCTCCGGCAGCAAGCCCG
ATCTCTCGAGACTCAGACCGAGAACCTCTTCCACACATACTCTCAATATG
CTTCGTTAACGAAGCTCCCACCCACACCCTCGGATGAAGAACAGCGGATC
GAATCGCAGCTCAAAGACCTCCTAGAACGACGCGACTCTCTGATCTCCCA
ACTCGCCCGCCTCCTCGACTCCGAAGCAACCCTCACCTCCTCCGCCCTCA
AACAAAACAACCTCGCCCGCCACCGCGAAGTCCTCCACGACCACCGTCGT
GAACTACAGCGTCTCAAATCTGCCATCGCCGAATCCCGCGACCGCGCTAA
TCTCCTCTCCAACGTCCGCTCCGATATCGATGCCTACCGCAACTCGAACC
CGGGTCAGGCAGAAGCAGATTACATGCTTGAAGAGCGGGGTCGGATTGAT
GAGAGCCATAATATGATTGATGGGGTGTTGAGTCAGGCTTACGCTATTAA
TGAGAACTTCGGTCTGCAGCGTGAGACGCTGGCTAGTATCAACCGACGCA
TTGTGGGCGCGGCGAACTCAGTGCCGGGCATGAATGCGTTGATTGGGAAG
ATTGGGTCTAAGAGGAGACGGGATGCGTTGATTTTGGGGGCTTTTATTGG
GTTTTGCTTTTTGATGTTGCTTTGGTTGAGGTGAATGGCCACCTCAACCG
GTACCGGCTGGGCTCAGCTCCGGCAGCAAGCCCGATCTCTCGAGACTCAG
ACCGAGAACCTCTTCCACACATACTCTCAATATGCTTCGTTAACGAAGCT
CCCACCCACACCCTCGGATGAAGAACAGCGGATCGAATCGCAGCTCAAAG
ACCTCCTAGAACGACGCGACTCTCTGATCTCCCAACTCGCCCGCCTCCTC
GACTCCGAAGCAACCCTCACCTCCTCCGCCCTCAAACAAAACAACCTCGC
CCGCCACCGCGAAGTCCTCCACGACCACCGTCGTGAACTACAGCGTCTCA
AATCTGCCATCGCCGAATCCCGCGACCGCGCTAATCTCCTCTCCAACGTC
CGCTCCGATATCGATGCCTACCGCAACTCGAACCCGGGTCAGGCAGAAGC
AGATTACATGCTTGAAGAGCGGGGTCGGATTGATGAGAGCCATAATATGA
TTGATGGGGTGTTGAGTCAGGCTTACGCTATTAATGAGAACTTCGGTCTG
CAGCGTGAGACGCTGGCTAGTATCAACCGACGCATTGTGGGCGCGGCGAA
CTCAGTGCCGGGCATGAATGCGTTGATTGGGAAGATTGGGTCTAAGAGGA
GACGGGATGCGTTGATTTTGGGGGCTTTTATTGGGTTTTGCTTTTTGATG
TTGCTTTGGTTGAGGTGAATGGCCACCTCAACCGGTACCGGCTGGGCTCA
GCTCCGGCAGCAAGCCCGATCTCTCGAGACTCAGACCGAGAACCTCTTCC
ACACATACTCTCAATATGCTTCGTTAACGAAGCTCCCACCCACACCCTCG
GATGAAGAACAGCGGATCGAATCGCAGCTCAAAGACCTCCTAGAACGACG
CGACTCTCTGATCTCCCAACTCGCCCGCCTCCTCGACTCCGAAGCAACCC
TCACCTCCTCCGCCCTCAAACAAAACAACCTCGCCCGCCACCGCGAAGTC
CTCCACGACCACCGTCGTGAACTACAGCGTCTCAAATCTGCCATCGCCGA
ATCCCGCGACCGCGCTAATCTCCTCTCCAACGTCCGCTCCGATATCGATG
CCTACCGCAACTCGAACCCGGGTCAGGCAGAAGCAGATTACATGCTTGAA
GAGCGGGGTCGGATTGATGAGAGCCATAATATGATTGATGGGGTGTTGAG
TCAGGCTTACGCTATTAATGAGAACTTCGGTCTGCAGCGTGAGACGCTGG
CTAGTATCAACCGACGCATTGTGGGCGCGGCGAACTCAGTGCCGGGCATG
AATGCGTTGATTGGGAAGATTGGGTCTAAGAGGAGACGGGATGCGTTGAT
TTTGGGGGCTTTTATTGGGTTTTGCTTTTTGATGTTGCTTTGGTTGAGGT
GA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005801 | cis-Golgi network |
| GO:0000139 | Golgi membrane |
| GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265AL8 |
| DBxref | InterPro:IPR023601 |
| DBxref | PFAM:PF12352 |
| Product | vesicle transport v-SNARE protein superfamily |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851924.1 | supercontig | KZ851924.1:357637..359239 + |
|
