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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851924.1:376966..379476- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_283400-T1 ID=M747DRAFT_283400-T1|Name=M747DRAFT_283400-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2511bp|location=Sequence derived from alignment at KZ851924.1:376966..379476- (Aspergillus niger ATCC 13496)
GGCGGCGTATCAATTTATATTTTTTTATTCTGTCTGATCCCCCGCTAGAG
AAGTTTTCCTTTTCAAGGGTATAGCTTCCTTTTTCTACTTCTGTTTCATC
CCCTAAAAGAAATATATCCACCATGGTCGGGGTAAAGCGTCGAGTAGACG
CCGGTGACGAGCGCAATGGAAAACGGACCAAGACGAAGACGCCGGTGTCC
GTGCCCGCAAAGAAGGCCAAGTCGTCTGCGGCTCCCGTGAAGGCATCCAA
GTCTGTGTCGAAGAAGGGCGACAAGGGTGGAAAGAAGGATAAGAAGACTC
CTAGCAAGAAGAAGGCGCAGAAGGAGGAATCTGAATCTGAGGATGAGGAC
GATGAGGATGACTTTGATCTGGATGATGTTGATGACTCGGAGATTGATGC
TCTGGATGATGAGGATGACGAGGAGGATGTTGCTATGGATGATGTTGAGG
AGGTCGAGGAGAAGGAAGATACTGGGAAGAAGCCCAAGTCTGCGGATGCG
GATGCTCAGCAAAGTATGATTGATTTATTGATTGGTTTTTCCCTCGGTGA
AAAGTCTGGTACTAATGTGTTGCTTTTTATTATTTAGATAAGTCTACGTC
GCGCGAATCGCATGCGAAGCAAAAGGCCCTCCTGCAAGAGCGCAGGGCCG
CCAGACCCAACGCTGATATGATCGGTCGCTCGAAGAAGCTGTGGGAGCAG
CTGCGTCGCAAGTCCCATGTTCCGCTCGAGGAGCGGAAGAAGCTCATCAA
GGAGCTTTTTGAAATCATTACTGGACGTGTGAAGGACTTCGTTTTCAAGC
ATGACTCGGTCCGTGTCATCCAGACGGCCCTCAAATACGCCAACATGGAG
CAACGGAAGATGATCGCCACGGAACTGAAGGGCAGCTACAATGAGCTTGC
GCAGAGCCGTTATGCCAAGTTCCTGGTCGGAAAGTTGATTGTTCACGGTG
ATGCTGAGGTTCGTGATTTGATCGTGCCCGAGTTCTACGGACATGTCAAG
AGACTCATCAGACACCCCGAGGGGTCTTGGATTCTCGACGACATCTACCG
CACGGTTGCGACGAAGGAACAGAAGGCGAACCTCCTCCGTGAGTGGTATG
GCCCGGAATTCGTCATCTTTAGGGATGACAAGAACGGCCCTCCCAGTGCA
GACCTCTCTAAGATCCTTGAGGCGCACCCGGAGAAGAGGGGCCCCATCAT
GCACTACCTCTGGGAGCTTGTCAACCAGCTGGTGCAGAAGCGCAACTCTG
GTTTCACCATCCTGCACGACGCCATGCTGCAGTACTACCTTAACACTAAG
CCGGGCAGCTCCGAGGCTAATGAGTTCGTTGAGCTGCTGAAGGGTGATGA
AGAGGGAGACCTGGTGAAGAACTTGGCTTTTACCAAGTCTGGTGCACGGG
TGATGTCGTTGAGTCTGGCGTACTCCAACGCTAAGGACCGCAAGCTCCTT
ACCCGCTTCTACAGAGATACCATCAAGATGATGGCCGGCGATCTCCACGG
ACATCTGGTTCTGTTGACGGCATACGAAGTTATTGACGATACCAAGCTTA
CCTCGAAGTTGATCTTCCCCGAACTTCTGAACCAGGGAATGGACGCCGAG
GCACGGAACGAAGAACTGCTTTTCCAAGTGAACGACTTGACAGCGCGTAT
CCCCATCCTGTATCCGTTTGTCGGCGACCGGGTCAAGTGGCTTCTGCCTG
ACGGCGACCATGAGTTGCTGAAGGAGATTCGTGACATTCGTAAGGAGACC
TCCAAGAAGGATCCCGAGCTTCGACGACAGGAGCTGGTCAAGGCTGCGTC
GGCGAGCGTGCTCGAGCTCATTTCCGCACGCGCCGACTCTCTCCTCGAGA
CGAGCTTTGGATGCCAATTCATCTCCGAGGTGTTGTTCGAAGCCGATGGA
GACAAGAGCGCCGCATTGGCCGCCGTGGCTGAGGCCGCCAAATCCAGAGC
CGACACCAAGGACTCTCCGTTCGTGGGTCGGTTGCTCAAGTCACTGGTTC
AGGGTGGACGGTTTAACGCTGCCGAGAAGAAGGTCGAGAAGGTGCAGCCT
CCGCTCAACTTCCACGGTCTCCTTTACGAGCAGATCCAAGAAGAGACAAT
GTCGTGGGCCACGGGATCCAATGTGTTTGTCGTGGTGGCTCTTGCGGAGT
CGGACGACTTCGAGAAGAAGGCCGAGTTGCTGAAGACGCTGAAGAAGAAC
AAGAAGGCGCTGGAGAAGGCGTCGTCGGAGACTAGCAAGGATGGCAAGAA
GGGCAGCCCAGTCAGCAGTGGTGCGAAGCTGCTGCTGGAGAAGATCCGGT
AGAGATTTTCTCTGTGTCAGTCCCTTAGCAGGGGGGCAATGTAATATTGG
CTGGGATTTTTTTTTTCTTTCTTCTTTTACAAACGCATTTCATTTGCTCA
TCGAGGTGTTCGTTGGATTCTTATTATATTGATTCCTTTTTCTTATAGGT
GATATCTCCATCTGTACAGGGTCTGTGATAGACATGGGACCACAACGAGT
CAGAAAAAAGC back to topCoding sequence (CDS) from alignment at KZ851924.1:376966..379476- >M747DRAFT_283400-T1 ID=M747DRAFT_283400-T1|Name=M747DRAFT_283400-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4212bp|location=Sequence derived from alignment at KZ851924.1:376966..379476- (Aspergillus niger ATCC 13496)
ATAAGTCTACGTCGCGCGAATCGCATGCGAAGCAAAAGGCCCTCCTGCAA
GAGCGCAGGGCCGCCAGACCCAACGCTGATATGATCGGTCGCTCGAAGAA
GCTGTGGGAGCAGCTGCGTCGCAAGTCCCATGTTCCGCTCGAGGAGCGGA
AGAAGCTCATCAAGGAGCTTTTTGAAATCATTACTGGACGTGTGAAGGAC
TTCGTTTTCAAGCATGACTCGGTCCGTGTCATCCAGACGGCCCTCAAATA
CGCCAACATGGAGCAACGGAAGATGATCGCCACGGAACTGAAGGGCAGCT
ACAATGAGCTTGCGCAGAGCCGTTATGCCAAGTTCCTGGTCGGAAAGTTG
ATTGTTCACGGTGATGCTGAGGTTCGTGATTTGATCGTGCCCGAGTTCTA
CGGACATGTCAAGAGACTCATCAGACACCCCGAGGGGTCTTGGATTCTCG
ACGACATCTACCGCACGGTTGCGACGAAGGAACAGAAGGCGAACCTCCTC
CGTGAGTGGTATGGCCCGGAATTCGTCATCTTTAGGGATGACAAGAACGG
CCCTCCCAGTGCAGACCTCTCTAAGATCCTTGAGGCGCACCCGGAGAAGA
GGGGCCCCATCATGCACTACCTCTGGGAGCTTGTCAACCAGCTGGTGCAG
AAGCGCAACTCTGGTTTCACCATCCTGCACGACGCCATGCTGCAGTACTA
CCTTAACACTAAGCCGGGCAGCTCCGAGGCTAATGAGTTCGTTGAGCTGC
TGAAGGGTGATGAAGAGGGAGACCTGGTGAAGAACTTGGCTTTTACCAAG
TCTGGTGCACGGGTGATGTCGTTGAGTCTGGCGTACTCCAACGCTAAGGA
CCGCAAGCTCCTTACCCGCTTCTACAGAGATACCATCAAGATGATGGCCG
GCGATCTCCACGGACATCTGGTTCTGTTGACGGCATACGAAGTTATTGAC
GATACCAAGCTTACCTCGAAGTTGATCTTCCCCGAACTTCTGAACCAGGG
AATGGACGCCGAGGCACGGAACGAAGAACTGCTTTTCCAAGTGAACGACT
TGACAGCGCGTATCCCCATCCTGTATCCGTTTGTCGGCGACCGGGTCAAG
TGGCTTCTGCCTGACGGCGACCATGAGTTGCTGAAGGAGATTCGTGACAT
TCGTAAGGAGACCTCCAAGAAGGATCCCGAGCTTCGACGACAGGAGCTGG
TCAAGGCTGCGTCGGCGAGCGTGCTCGAGCTCATTTCCGCACGCGCCGAC
TCTCTCCTCGAGACGAGCTTTGGATGCCAATTCATCTCCGAGGTGTTGTT
CGAAGCCGATGGAGACAAGAGCGCCGCATTGGCCGCCGTGGCTGAGGCCG
CCAAATCCAGAGCCGACACCAAGGACTCTCCGTTCGTGGGTCGGTTGCTC
AAGTCACTGGTTCAGGGTGGACGGTTTAACGCTGCCGAGAAGAAGGTCGA
GAAGGTGCAGCCTCCGCTCAACTTCCACGGTCTCCTTTACGAGCAGATCC
AAGAAGAGACAATGTCGTGGGCCACGGGATCCAATGTGTTTGTCGTGGTG
GCTCTTGCGGAGTCGGACGACTTCGAGAAGAAGGCCGAGTTGCTGAAGAC
GCTGAAGAAGAACAAGAAGGCGCTGGAGAAGGCGTCGTCGGAGACTAGCA
AGGATGGCAAGAAGGGCAGCCCAGTCAGCAGTGGTGCGAAGCTGCTGCTG
GAGAAGATCCGGTAGATGGTCGGGGTAAAGCGTCGAGTAGACGCCGGTGA
CGAGCGCAATGGAAAACGGACCAAGACGAAGACGCCGGTGTCCGTGCCCG
CAAAGAAGGCCAAGTCGTCTGCGGCTCCCGTGAAGGCATCCAAGTCTGTG
TCGAAGAAGGGCGACAAGGGTGGAAAGAAGGATAAGAAGACTCCTAGCAA
GAAGAAGGCGCAGAAGGAGGAATCTGAATCTGAGGATGAGGACGATGAGG
ATGACTTTGATCTGGATGATGTTGATGACTCGGAGATTGATGCTCTGGAT
GATGAGGATGACGAGGAGGATGTTGCTATGGATGATGTTGAGGAGGTCGA
GGAGAAGGAAGATACTGGGAAGAAGCCCAAGTCTGCGGATGCGGATGCTC
AGCAAAATAAGTCTACGTCGCGCGAATCGCATGCGAAGCAAAAGGCCCTC
CTGCAAGAGCGCAGGGCCGCCAGACCCAACGCTGATATGATCGGTCGCTC
GAAGAAGCTGTGGGAGCAGCTGCGTCGCAAGTCCCATGTTCCGCTCGAGG
AGCGGAAGAAGCTCATCAAGGAGCTTTTTGAAATCATTACTGGACGTGTG
AAGGACTTCGTTTTCAAGCATGACTCGGTCCGTGTCATCCAGACGGCCCT
CAAATACGCCAACATGGAGCAACGGAAGATGATCGCCACGGAACTGAAGG
GCAGCTACAATGAGCTTGCGCAGAGCCGTTATGCCAAGTTCCTGGTCGGA
AAGTTGATTGTTCACGGTGATGCTGAGGTTCGTGATTTGATCGTGCCCGA
GTTCTACGGACATGTCAAGAGACTCATCAGACACCCCGAGGGGTCTTGGA
TTCTCGACGACATCTACCGCACGGTTGCGACGAAGGAACAGAAGGCGAAC
CTCCTCCGTGAGTGGTATGGCCCGGAATTCGTCATCTTTAGGGATGACAA
GAACGGCCCTCCCAGTGCAGACCTCTCTAAGATCCTTGAGGCGCACCCGG
AGAAGAGGGGCCCCATCATGCACTACCTCTGGGAGCTTGTCAACCAGCTG
GTGCAGAAGCGCAACTCTGGTTTCACCATCCTGCACGACGCCATGCTGCA
GTACTACCTTAACACTAAGCCGGGCAGCTCCGAGGCTAATGAGTTCGTTG
AGCTGCTGAAGGGTGATGAAGAGGGAGACCTGGTGAAGAACTTGGCTTTT
ACCAAGTCTGGTGCACGGGTGATGTCGTTGAGTCTGGCGTACTCCAACGC
TAAGGACCGCAAGCTCCTTACCCGCTTCTACAGAGATACCATCAAGATGA
TGGCCGGCGATCTCCACGGACATCTGGTTCTGTTGACGGCATACGAAGTT
ATTGACGATACCAAGCTTACCTCGAAGTTGATCTTCCCCGAACTTCTGAA
CCAGGGAATGGACGCCGAGGCACGGAACGAAGAACTGCTTTTCCAAGTGA
ACGACTTGACAGCGCGTATCCCCATCCTGTATCCGTTTGTCGGCGACCGG
GTCAAGTGGCTTCTGCCTGACGGCGACCATGAGTTGCTGAAGGAGATTCG
TGACATTCGTAAGGAGACCTCCAAGAAGGATCCCGAGCTTCGACGACAGG
AGCTGGTCAAGGCTGCGTCGGCGAGCGTGCTCGAGCTCATTTCCGCACGC
GCCGACTCTCTCCTCGAGACGAGCTTTGGATGCCAATTCATCTCCGAGGT
GTTGTTCGAAGCCGATGGAGACAAGAGCGCCGCATTGGCCGCCGTGGCTG
AGGCCGCCAAATCCAGAGCCGACACCAAGGACTCTCCGTTCGTGGGTCGG
TTGCTCAAGTCACTGGTTCAGGGTGGACGGTTTAACGCTGCCGAGAAGAA
GGTCGAGAAGGTGCAGCCTCCGCTCAACTTCCACGGTCTCCTTTACGAGC
AGATCCAAGAAGAGACAATGTCGTGGGCCACGGGATCCAATGTGTTTGTC
GTGGTGGCTCTTGCGGAGTCGGACGACTTCGAGAAGAAGGCCGAGTTGCT
GAAGACGCTGAAGAAGAACAAGAAGGCGCTGGAGAAGGCGTCGTCGGAGA
CTAGCAAGGATGGCAAGAAGGGCAGCCCAGTCAGCAGTGGTGCGAAGCTG
CTGCTGGAGAAGATCCGGTAGATGGTCGGGGTAAAGCGTCGAGTAGACGC
CGGTGACGAGCGCAATGGAAAACGGACCAAGACGAAGACGCCGGTGTCCG
TGCCCGCAAAGAAGGCCAAGTCGTCTGCGGCTCCCGTGAAGGCATCCAAG
TCTGTGTCGAAGAAGGGCGACAAGGGTGGAAAGAAGGATAAGAAGACTCC
TAGCAAGAAGAAGGCGCAGAAGGAGGAATCTGAATCTGAGGATGAGGACG
ATGAGGATGACTTTGATCTGGATGATGTTGATGACTCGGAGATTGATGCT
CTGGATGATGAGGATGACGAGGAGGATGTTGCTATGGATGATGTTGAGGA
GGTCGAGGAGAAGGAAGATACTGGGAAGAAGCCCAAGTCTGCGGATGCGG
ATGCTCAGCAAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003723 | RNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR016024 |
| DBxref | InterPro:IPR033133 |
| DBxref | InterPro:IPR012959 |
| DBxref | InterPro:IPR001313 |
| DBxref | PFAM:PF08144 |
| Product | protein PUF6 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851924.1 | supercontig | KZ851924.1:376966..379476 - |
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