You are here

Home

M747DRAFT_284441-T1, M747DRAFT_284441-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_284441-T1
Unique NameM747DRAFT_284441-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851928.1:245211..246811-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_284441-T1 ID=M747DRAFT_284441-T1|Name=M747DRAFT_284441-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1601bp|location=Sequence derived from alignment at KZ851928.1:245211..246811- (Aspergillus niger ATCC 13496)
GGGCTCTTTCATATTGCTCACTTTGGTGTACAAGAAAGACAAAGGCAGTG
GTTGTCACAGGTGAATAATGCAAGTGCCAATGGAACGAACTAAATACGGG
CCAGTCGCGACACCTGCCGGATGAGGTCATCGGCCGGTTCCTGACTGGAG
AAGCCTTTATGCGCAAACCGAGGATCTCTTAAAGTTGCGGGTCAATCCGC
AACCGCTGCAGCAGCTTCATCCGACAATCTCCATTCTTTCAATCCAACAG
GAGACATTGCAGTTCAGTGTGATCCCAAACTCACTACCATCAGCTCAACT
GAACACTCTCCCTCTCATCAACAATGGCCGCCAGAAACACCCTCCGTCGC
GCCCTTCTCTACAGTACGTCACTGCCCCCTTCTCTTCCCAACCCATAGCT
CTCCCCGCATTTCCGCACTCATCCCACACCCCAACATGCTATCCGACTAT
ACCAATTACCCCCTAACTAACCCCGAATCCCAGTCCCGGGCTCCTCCCAA
CGCTTCATCGATAAATCCCGCACTCTAACCGCCGACTGCGTGGCCTACGA
TCTCGAAGACAGCGTAACTCCGCACAAGAAAGCGGAAGCTCGGTCCCTGG
TGCGGAGAGCACTCGACGAGCCCGCACCGCAGGGAATCCGCGAACGAGCC
GTACGAATCAACTCCGTGGACAGCGGCCTCGCCCTAGGAGATCTCACCGA
AGTGGTGCGTACCATTATCATCCCTCACTTTTCTCCTCCATTCAACTCAC
TAAATCCGATAATAGCTCAAATCTCCCAATCTCACAACAATCGTGATCCC
CAAAGTCAACACCCCCTCGGACCTTACTTTCGTGAACGATGTCATCACGC
ACACTCTCTCCCAACAACAACAACAGGATCCTTCCACCCCGAGACCTCCA
ATCTCCCTCCTCGCTCTAGTCGAGTCCGCCAAATCCCTCACAAACCTCAC
CCAAATCTGCGCCTCCACGCCCCTCCTGCAGGGCCTCATTTTCGCGGCCG
AAGACTTCGCACTCGACCTCAGCATCACCCGTACCCCGTCATTAACTGAA
TTCCTCTTCGCAAGGTCTATGATTGCTACGGCTGCTCGCGCTGCGAACCT
TCCCTCTACTATTGATTTGGTCTGCACAGCGTACAAATCTACCAAGGGGG
ACGGGTCCCCGCCTGCGGTGCTGGAGGAGGAATGTCGCGATGGGAGACGG
CTAGGGTTCAATGGGAAGCAGTGTATTCATCCGTCGCAGGTGGAGACGGC
GCAGGCGATCTTTGGACCGGATCCGGAAGAAGTTAAGTGGGCTGTGAGGG
TGTGTGTGGCGGATGAGAAGGCTGCGAGAGCGGGACGGGGTGCGTGGACG
CTTGATGGGAAAATGATTGATGTGCCGGTGGCGGAGAAGGCCAGGGCGGT
GGTTAGGAAGGCGGAGGCGTGTGGATTTGATGTTGGGAAGTTGAGGGAGG
AGTGGGGGCATCAGGAACCGGAGTGAGCATGCTTGTACTAGGTGGTGTTT
GTGTCTTGAGTGAGAGGAGTTATATATACAAAAATTCAGTCAAGCCAGTT
GACAAATTAGGAGTAACTATTTATGGTACTTGTTGGATGAGGGGAAGGTA
G
back to top

Coding sequence (CDS) from alignment at KZ851928.1:245211..246811-

>M747DRAFT_284441-T1 ID=M747DRAFT_284441-T1|Name=M747DRAFT_284441-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2916bp|location=Sequence derived from alignment at KZ851928.1:245211..246811- (Aspergillus niger ATCC 13496)
CTCAAATCTCCCAATCTCACAACAATCGTGATCCCCAAAGTCAACACCCC
CTCGGACCTTACTTTCGTGAACGATGTCATCACGCACACTCTCTCCCAAC
AACAACAACAGGATCCTTCCACCCCGAGACCTCCAATCTCCCTCCTCGCT
CTAGTCGAGTCCGCCAAATCCCTCACAAACCTCACCCAAATCTGCGCCTC
CACGCCCCTCCTGCAGGGCCTCATTTTCGCGGCCGAAGACTTCGCACTCG
ACCTCAGCATCACCCGTACCCCGTCATTAACTGAATTCCTCTTCGCAAGG
TCTATGATTGCTACGGCTGCTCGCGCTGCGAACCTTCCCTCTACTATTGA
TTTGGTCTGCACAGCGTACAAATCTACCAAGGGGGACGGGTCCCCGCCTG
CGGTGCTGGAGGAGGAATGTCGCGATGGGAGACGGCTAGGGTTCAATGGG
AAGCAGTGTATTCATCCGTCGCAGGTGGAGACGGCGCAGGCGATCTTTGG
ACCGGATCCGGAAGAAGTTAAGTGGGCTGTGAGGGTGTGTGTGGCGGATG
AGAAGGCTGCGAGAGCGGGACGGGGTGCGTGGACGCTTGATGGGAAAATG
ATTGATGTGCCGGTGGCGGAGAAGGCCAGGGCGGTGGTTAGGAAGGCGGA
GGCGTGTGGATTTGATGTTGGGAAGTTGAGGGAGGAGTGGGGGCATCAGG
AACCGGAGTGATCCCGGGCTCCTCCCAACGCTTCATCGATAAATCCCGCA
CTCTAACCGCCGACTGCGTGGCCTACGATCTCGAAGACAGCGTAACTCCG
CACAAGAAAGCGGAAGCTCGGTCCCTGGTGCGGAGAGCACTCGACGAGCC
CGCACCGCAGGGAATCCGCGAACGAGCCGTACGAATCAACTCCGTGGACA
GCGGCCTCGCCCTAGGAGATCTCACCGAAGTGATGGCCGCCAGAAACACC
CTCCGTCGCGCCCTTCTCTACACTCAAATCTCCCAATCTCACAACAATCG
TGATCCCCAAAGTCAACACCCCCTCGGACCTTACTTTCGTGAACGATGTC
ATCACGCACACTCTCTCCCAACAACAACAACAGGATCCTTCCACCCCGAG
ACCTCCAATCTCCCTCCTCGCTCTAGTCGAGTCCGCCAAATCCCTCACAA
ACCTCACCCAAATCTGCGCCTCCACGCCCCTCCTGCAGGGCCTCATTTTC
GCGGCCGAAGACTTCGCACTCGACCTCAGCATCACCCGTACCCCGTCATT
AACTGAATTCCTCTTCGCAAGGTCTATGATTGCTACGGCTGCTCGCGCTG
CGAACCTTCCCTCTACTATTGATTTGGTCTGCACAGCGTACAAATCTACC
AAGGGGGACGGGTCCCCGCCTGCGGTGCTGGAGGAGGAATGTCGCGATGG
GAGACGGCTAGGGTTCAATGGGAAGCAGTGTATTCATCCGTCGCAGGTGG
AGACGGCGCAGGCGATCTTTGGACCGGATCCGGAAGAAGTTAAGTGGGCT
GTGAGGGTGTGTGTGGCGGATGAGAAGGCTGCGAGAGCGGGACGGGGTGC
GTGGACGCTTGATGGGAAAATGATTGATGTGCCGGTGGCGGAGAAGGCCA
GGGCGGTGGTTAGGAAGGCGGAGGCGTGTGGATTTGATGTTGGGAAGTTG
AGGGAGGAGTGGGGGCATCAGGAACCGGAGTGATCCCGGGCTCCTCCCAA
CGCTTCATCGATAAATCCCGCACTCTAACCGCCGACTGCGTGGCCTACGA
TCTCGAAGACAGCGTAACTCCGCACAAGAAAGCGGAAGCTCGGTCCCTGG
TGCGGAGAGCACTCGACGAGCCCGCACCGCAGGGAATCCGCGAACGAGCC
GTACGAATCAACTCCGTGGACAGCGGCCTCGCCCTAGGAGATCTCACCGA
AGTGATGGCCGCCAGAAACACCCTCCGTCGCGCCCTTCTCTACACTCAAA
TCTCCCAATCTCACAACAATCGTGATCCCCAAAGTCAACACCCCCTCGGA
CCTTACTTTCGTGAACGATGTCATCACGCACACTCTCTCCCAACAACAAC
AACAGGATCCTTCCACCCCGAGACCTCCAATCTCCCTCCTCGCTCTAGTC
GAGTCCGCCAAATCCCTCACAAACCTCACCCAAATCTGCGCCTCCACGCC
CCTCCTGCAGGGCCTCATTTTCGCGGCCGAAGACTTCGCACTCGACCTCA
GCATCACCCGTACCCCGTCATTAACTGAATTCCTCTTCGCAAGGTCTATG
ATTGCTACGGCTGCTCGCGCTGCGAACCTTCCCTCTACTATTGATTTGGT
CTGCACAGCGTACAAATCTACCAAGGGGGACGGGTCCCCGCCTGCGGTGC
TGGAGGAGGAATGTCGCGATGGGAGACGGCTAGGGTTCAATGGGAAGCAG
TGTATTCATCCGTCGCAGGTGGAGACGGCGCAGGCGATCTTTGGACCGGA
TCCGGAAGAAGTTAAGTGGGCTGTGAGGGTGTGTGTGGCGGATGAGAAGG
CTGCGAGAGCGGGACGGGGTGCGTGGACGCTTGATGGGAAAATGATTGAT
GTGCCGGTGGCGGAGAAGGCCAGGGCGGTGGTTAGGAAGGCGGAGGCGTG
TGGATTTGATGTTGGGAAGTTGAGGGAGGAGTGGGGGCATCAGGAACCGG
AGTGATCCCGGGCTCCTCCCAACGCTTCATCGATAAATCCCGCACTCTAA
CCGCCGACTGCGTGGCCTACGATCTCGAAGACAGCGTAACTCCGCACAAG
AAAGCGGAAGCTCGGTCCCTGGTGCGGAGAGCACTCGACGAGCCCGCACC
GCAGGGAATCCGCGAACGAGCCGTACGAATCAACTCCGTGGACAGCGGCC
TCGCCCTAGGAGATCTCACCGAAGTGATGGCCGCCAGAAACACCCTCCGT
CGCGCCCTTCTCTACA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_284441M747DRAFT_284441Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_284441-T1M747DRAFT_284441-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_284441-T1.cdsM747DRAFT_284441-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_284441-T1.utr3p1M747DRAFT_284441-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_284441-T1.exon3M747DRAFT_284441-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_284441-T1.exon2M747DRAFT_284441-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_284441-T1.exon1M747DRAFT_284441-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_284441-T1.utr5p1M747DRAFT_284441-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR015813
DBxrefInterPro:IPR005000
DBxrefInterPro:IPR011206
DBxrefInterPro:IPR040442
DBxrefPFAM:PF03328
Productbeta subunit of citrate lyase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851928.1supercontigKZ851928.1:245211..246811 -
Powered by Drupal