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M747DRAFT_284650-T1, M747DRAFT_284650-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_284650-T1
Unique NameM747DRAFT_284650-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851929.1:116571..118514+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_284650-T1 ID=M747DRAFT_284650-T1|Name=M747DRAFT_284650-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1944bp|location=Sequence derived from alignment at KZ851929.1:116571..118514+ (Aspergillus niger ATCC 13496)
CAGATACCCTCCGCTAATCGCGACACTCGATTGCTCCTCTCGGGGACAAG
AACTACCTAGTTCGTAAAGATTCGTGTCCCACGGTTCTTACCCCCCTGGC
TGGGGCACTTCATTCCCAAATCTCTACGCCCAAACGTGACAATGGCGGTC
CCGGAGACACAGCCCGCTCCGCAAGGAAGCGTTGCCGACCAGAATGCGCC
TATAGCTGCTGCTGCTGAACCGAGAAAGAAGCTCCTTGGAAGACAGTTCT
ACGAAAGTATTGGAAGCCCGAAGTACATTATTGCACCTATGGTGGACCGG
TCTGAGTTTGTAGGTTCCCCTACGAATGTACTTTTTGGATCTCAACTAAC
CGGCCTGGAGGCGTGGCGCATGCTCACTAGGTCGTTCATGACACCGGAAG
ACCAGAAAAAGGTTCTCGCATACTCCCCCATGTACCACGCGCGCTTGTTC
CGTGAGCAAGCGAATGTCCGCGTACAGCACTTCCACCCAACTCGCGCTGC
CGCCGGCAAAGGCGAGGATGAATCGCCGTATCTCGACGGAAACCCTTCGT
TCGATCGGCCTCTATTCGTACAATTCTGCGCCAATGATCCTGATGATTTC
TTGGAGGCCGCGCGTCATGTGGCACCATATTGCGATGCAGTGGATCTCAA
TCTGGGATGTCCCCAAGGTATTGCGAAGAGGGGTCACTATGGTGCTTTCC
TTCAGGAGGACTGGGACCTGATTTACAGGCTGATTAACCGACTTCACAAC
GAACTCTCGATCCCAGTCACTGCCAAGTTTCGTATTCAGGAAACGAAAGA
GAAAACGCTCGAATATGCGAAGATGATCTTGTCTGCTGGTGCAAACATAA
TCACTGTGCATGGACGGAGAAGAGAACAGAAAGGTCACAACACTGGACTG
GCTGATTGGAGCTACATTCGCTATCTCCGCGATAATCTTCCCCCAGAGAC
GGTCATCTTCGCGAACGGCAACAACCTGAACTATGAAGATCTGGACCGTT
GTCTGGAAGAGACAGGAGCCGATGGTGTCATGAGTGCGGAAGGCAACTTG
TCTGATCCGTCAATTTTCAGCAAGCCCCCTCCGGTTGGCAGTGAAGGAAG
GGAATACTGGCGAGGCAGGGACGGAAAGGGCGGATATCGGATTGACGCCA
TGCTACGGCGGTACTTGGACATCATTTACAAGTACGTTCTTGAACAACCT
GTTCCGGAAAGGAAGCCTCTTTGGCTTCCCTCGGACGCAGTGGAAGAGGA
ATTTGAACAGACAACCGAAACGACCGAGGAAGCAGAAGACGGCCCACCTA
AGAAGAAGCAAAAGCGCGAGAAGTCGAAGAGAGCGGCCTCCCCCAGTCTT
GGTGTAATGCAGGGTCATCTCTTCCAGCTGCTTCGCCCCATGGTCTCCGT
GCATACCAATGTCCGTGATGCGCTAGCGAGATCAAGACCTGGCGATATGC
CCGCATTCGAGAATGTCTTGGCTCTCGTTGAGCAGGCAATCAAGAAGGGT
CTCAAGGAATACGAGCAGTTCCCGGAACGCTTTGAGAAGGATCCGAACCA
AGAACTGACCGGATCCAAAGCGACTATTGCCGAGTACGGCAGACCTTGGT
GGATCTGCCAGCCACACATTCGGCCACTGCCTGAAGAGGCTGTCGAGCTG
GGCGCACTTACTGTGAAGAAGAAGAACGATGGCAACGAAAAGCCTAAGGC
GGACGAGTCTTCTGAAAAGGCCACCCCTGCTGCAGAGGGTTCTGCCACTC
CTTCGAAGTCGGACGTGGACGCGACCACCCCTGCCACGACGACTACTCCG
GACAACCTGGTGAGCGGTTGATATTACGAATCAAGATTCGGTGTTTTTCA
GCGGAGTATTGGGACCAGCATCTTATACCCAAGTCGGGCATAGCTACTAT
TCATGTTAGATATAGACGCATACAGAGCACATAGTACATAGAGC
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Coding sequence (CDS) from alignment at KZ851929.1:116571..118514+

>M747DRAFT_284650-T1 ID=M747DRAFT_284650-T1|Name=M747DRAFT_284650-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3258bp|location=Sequence derived from alignment at KZ851929.1:116571..118514+ (Aspergillus niger ATCC 13496)
ATGGCGGTCCCGGAGACACAGCCCGCTCCGCAAGGAAGCGTTGCCGACCA
GAATGCGCCTATAGCTGCTGCTGCTGAACCGAGAAAGAAGCTCCTTGGAA
GACAGTTCTACGAAAGTATTGGAAGCCCGAAGTACATTATTGCACCTATG
GTGGACCGGTCTGAGTTTGCGTGGCGCATGCTCACTAGGTCGTTCATGAC
ACCGGAAGACCAGAAAAAGGTTCTCGCATACTCCCCCATGTACCACGCGC
GCTTGTTCCGTGAGCAAGCGAATGTCCGCGTACAGCACTTCCACCCAACT
CGCGCTGCCGCCGGCAAAGGCGAGGATGAATCGCCGTATCTCGACGGAAA
CCCTTCGTTCGATCGGCCTCTATTCGTACAATTCTGCGCCAATGATCCTG
ATGATTTCTTGGAGGCCGCGCGTCATGTGGCACCATATTGCGATGCAGTG
GATCTCAATCTGGGATGTCCCCAAGGTATTGCGAAGAGGGGTCACTATGG
TGCTTTCCTTCAGGAGGACTGGGACCTGATTTACAGGCTGATTAACCGAC
TTCACAACGAACTCTCGATCCCAGTCACTGCCAAGTTTCGTATTCAGGAA
ACGAAAGAGAAAACGCTCGAATATGCGAAGATGATCTTGTCTGCTGGTGC
AAACATAATCACTGTGCATGGACGGAGAAGAGAACAGAAAGGTCACAACA
CTGGACTGGCTGATTGGAGCTACATTCGCTATCTCCGCGATAATCTTCCC
CCAGAGACGGTCATCTTCGCGAACGGCAACAACCTGAACTATGAAGATCT
GGACCGTTGTCTGGAAGAGACAGGAGCCGATGGTGTCATGAGTGCGGAAG
GCAACTTGTCTGATCCGTCAATTTTCAGCAAGCCCCCTCCGGTTGGCAGT
GAAGGAAGGGAATACTGGCGAGGCAGGGACGGAAAGGGCGGATATCGGAT
TGACGCCATGCTACGGCGGTACTTGGACATCATTTACAAGTACGTTCTTG
AACAACCTGTTCCGGAAAGGAAGCCTCTTTGGCTTCCCTCGGACGCAGTG
GAAGAGGAATTTGAACAGACAACCGAAACGACCGAGGAAGCAGAAGACGG
CCCACCTAAGAAGAAGCAAAAGCGCGAGAAGTCGAAGAGAGCGGCCTCCC
CCAGTCTTGGTGTAATGCAGGGTCATCTCTTCCAGCTGCTTCGCCCCATG
GTCTCCGTGCATACCAATGTCCGTGATGCGCTAGCGAGATCAAGACCTGG
CGATATGCCCGCATTCGAGAATGTCTTGGCTCTCGTTGAGCAGGCAATCA
AGAAGGGTCTCAAGGAATACGAGCAGTTCCCGGAACGCTTTGAGAAGGAT
CCGAACCAAGAACTGACCGGATCCAAAGCGACTATTGCCGAGTACGGCAG
ACCTTGGTGGATCTGCCAGCCACACATTCGGCCACTGCCTGAAGAGGCTG
TCGAGCTGGGCGCACTTACTGTGAAGAAGAAGAACGATGGCAACGAAAAG
CCTAAGGCGGACGAGTCTTCTGAAAAGGCCACCCCTGCTGCAGAGGGTTC
TGCCACTCCTTCGAAGTCGGACGTGGACGCGACCACCCCTGCCACGACGA
CTACTCCGGACAACCTGGTGAGCGGTTGAATGGCGGTCCCGGAGACACAG
CCCGCTCCGCAAGGAAGCGTTGCCGACCAGAATGCGCCTATAGCTGCTGC
TGCTGAACCGAGAAAGAAGCTCCTTGGAAGACAGTTCTACGAAAGTATTG
GAAGCCCGAAGTACATTATTGCACCTATGGTGGACCGGTCTGAGTTTGCG
TGGCGCATGCTCACTAGGTCGTTCATGACACCGGAAGACCAGAAAAAGGT
TCTCGCATACTCCCCCATGTACCACGCGCGCTTGTTCCGTGAGCAAGCGA
ATGTCCGCGTACAGCACTTCCACCCAACTCGCGCTGCCGCCGGCAAAGGC
GAGGATGAATCGCCGTATCTCGACGGAAACCCTTCGTTCGATCGGCCTCT
ATTCGTACAATTCTGCGCCAATGATCCTGATGATTTCTTGGAGGCCGCGC
GTCATGTGGCACCATATTGCGATGCAGTGGATCTCAATCTGGGATGTCCC
CAAGGTATTGCGAAGAGGGGTCACTATGGTGCTTTCCTTCAGGAGGACTG
GGACCTGATTTACAGGCTGATTAACCGACTTCACAACGAACTCTCGATCC
CAGTCACTGCCAAGTTTCGTATTCAGGAAACGAAAGAGAAAACGCTCGAA
TATGCGAAGATGATCTTGTCTGCTGGTGCAAACATAATCACTGTGCATGG
ACGGAGAAGAGAACAGAAAGGTCACAACACTGGACTGGCTGATTGGAGCT
ACATTCGCTATCTCCGCGATAATCTTCCCCCAGAGACGGTCATCTTCGCG
AACGGCAACAACCTGAACTATGAAGATCTGGACCGTTGTCTGGAAGAGAC
AGGAGCCGATGGTGTCATGAGTGCGGAAGGCAACTTGTCTGATCCGTCAA
TTTTCAGCAAGCCCCCTCCGGTTGGCAGTGAAGGAAGGGAATACTGGCGA
GGCAGGGACGGAAAGGGCGGATATCGGATTGACGCCATGCTACGGCGGTA
CTTGGACATCATTTACAAGTACGTTCTTGAACAACCTGTTCCGGAAAGGA
AGCCTCTTTGGCTTCCCTCGGACGCAGTGGAAGAGGAATTTGAACAGACA
ACCGAAACGACCGAGGAAGCAGAAGACGGCCCACCTAAGAAGAAGCAAAA
GCGCGAGAAGTCGAAGAGAGCGGCCTCCCCCAGTCTTGGTGTAATGCAGG
GTCATCTCTTCCAGCTGCTTCGCCCCATGGTCTCCGTGCATACCAATGTC
CGTGATGCGCTAGCGAGATCAAGACCTGGCGATATGCCCGCATTCGAGAA
TGTCTTGGCTCTCGTTGAGCAGGCAATCAAGAAGGGTCTCAAGGAATACG
AGCAGTTCCCGGAACGCTTTGAGAAGGATCCGAACCAAGAACTGACCGGA
TCCAAAGCGACTATTGCCGAGTACGGCAGACCTTGGTGGATCTGCCAGCC
ACACATTCGGCCACTGCCTGAAGAGGCTGTCGAGCTGGGCGCACTTACTG
TGAAGAAGAAGAACGATGGCAACGAAAAGCCTAAGGCGGACGAGTCTTCT
GAAAAGGCCACCCCTGCTGCAGAGGGTTCTGCCACTCCTTCGAAGTCGGA
CGTGGACGCGACCACCCCTGCCACGACGACTACTCCGGACAACCTGGTGA
GCGGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0008033tRNA processing
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0050660flavin adenine dinucleotide binding
GO:0017150tRNA dihydrouridine synthase activity
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_284650M747DRAFT_284650Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_284650-T1.utr5p1M747DRAFT_284650-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_284650-T1.exon1M747DRAFT_284650-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_284650-T1.exon2M747DRAFT_284650-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_284650-T1.cdsM747DRAFT_284650-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_284650-T1.utr3p1M747DRAFT_284650-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_284650-T1M747DRAFT_284650-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09262Q6S
DBxrefInterPro:IPR035587
DBxrefInterPro:IPR018517
DBxrefInterPro:IPR001269
DBxrefInterPro:IPR013785
DBxrefPFAM:PF01207
Productdihydrouridine synthase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851929.1supercontigKZ851929.1:116571..118514 +
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