|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851930.1:106872..107899+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_284944-T1 ID=M747DRAFT_284944-T1|Name=M747DRAFT_284944-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1028bp|location=Sequence derived from alignment at KZ851930.1:106872..107899+ (Aspergillus niger ATCC 13496)
TTGAACCCAATCCCTCCCTCACTCACTACCTTCTCTAAACTCCTTCCTCG
GAATACAATGCAAATACACCACCAACCCTACTAACCACCACCGTCCCCAA
CCTACAAACTAGCCCTCTATAAAAAAAAAAAAGAAAAAGATTCAAAATGC
GCCTCGCCCACCTCCACCTCCCGGACATAACCTCCTTCACCCGCGTCGCC
AACCTCCAACAAACACTGACAAGCCGGCTCCTCTCGCACAAAAAGCACCT
CACCCCGAACCCCCCCGACCCAACCATAATAACCTTCAGCCCGAACCCAG
TCTACACGACCGGACGCCGCGACCTCCCTCCCTCCAACACCACCCACAGC
AACAGCAATGGCAATGGCAACATACTCTCCCTCCCGCCGAGCCTCGAACC
AATCCGCCAGATCCTAACGCCCCCGCAACCCAACAAACCCTACGACCCCA
AATCCCGGATAGCAGAATACCACCCCACCCTGCGCGGCGGACAAACGACC
TACCACGGACCGGGCCAACTAGTCGCGTACACGATTCTCGATCTACGGCG
ATTGGGACTCACCCCGCGGTGCCATATACGGTTGTTGGAGAATAGTGTGA
TTGATGTGTTGAGGGAGTATGGGGTGAGGGGGATGGTTACGGAGGATCCG
GGGGTTTGGGTGCATGATACCCATGGACAGAAACAGGGGGGAGGGGCTGG
TGGGGGGAAGGGCGAGCTGCCGAAGAAAATCACGGCCGTGGGGGTACATC
TCAGGAGACATATTAGTAGTTATGGGATTGGGTTGAATGTGACGGAGGAG
CCGATGTGGTGGTTTCGACAGATTGTGGCGTGTGGGTTAGAGGGGAGGGA
GACGACGAGTTTGCAGGGGCTGGGGGTGACAGGGGTAACGGTTGAGGAGG
TCGCGGGGATGTTTGTGGGGAAGTTTGTTGGGAGGGTAAATGGGGATTTT
GCCTGTGGGGATGGGGCTACCGGGGAGGGGATCGAGGAGGTGTATAGGGT
GAGTGAGAAGGATTTGTTGAGGGAGTGA back to topCoding sequence (CDS) from alignment at KZ851930.1:106872..107899+ >M747DRAFT_284944-T1 ID=M747DRAFT_284944-T1|Name=M747DRAFT_284944-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1650bp|location=Sequence derived from alignment at KZ851930.1:106872..107899+ (Aspergillus niger ATCC 13496)
ATGCGCCTCGCCCACCTCCACCTCCCGGACATAACCTCCTTCACCCGCGT
CGCCAACCTCCAACAAACACTGACAAGCCGGCTCCTCTCGCACAAAAAGC
ACCTCACCCCGAACCCCCCCGACCCAACCATAATAACCTTCAGCCCGAAC
CCAGTCTACACGACCGGACGCCGCGACCTCCCTCCCTCCAACACCACCCA
CAGCAACAGCAATGGCAATGGCAACATACTCTCCCTCCCGCCGAGCCTCG
AACCAATCCGCCAGATCCTAACGCCCCCGCAACCCAACAAACCCTACGAC
CCCAAATCCCGGATAGCAGAATACCACCCCACCCTGCGCGGCGGACAAAC
GACCTACCACGGACCGGGCCAACTAGTCGCGTACACGATTCTCGATCTAC
GGCGATTGGGACTCACCCCGCGGTGCCATATACGGTTGTTGGAGAATAGT
GTGATTGATGTGTTGAGGGAGTATGGGGTGAGGGGGATGGTTACGGAGGA
TCCGGGGGTTTGGCTGCCGAAGAAAATCACGGCCGTGGGGGTACATCTCA
GGAGACATATTAGTAGTTATGGGATTGGGTTGAATGTGACGGAGGAGCCG
ATGTGGTGGTTTCGACAGATTGTGGCGTGTGGGTTAGAGGGGAGGGAGAC
GACGAGTTTGCAGGGGCTGGGGGTGACAGGGGTAACGGTTGAGGAGGTCG
CGGGGATGTTTGTGGGGAAGTTTGTTGGGAGGGTAAATGGGGATTTTGCC
TGTGGGGATGGGGCTACCGGGGAGGGGATCGAGGAGGTGTATAGGGTGAG
TGAGAAGGATTTGTTGAGGGAGTGAATGCGCCTCGCCCACCTCCACCTCC
CGGACATAACCTCCTTCACCCGCGTCGCCAACCTCCAACAAACACTGACA
AGCCGGCTCCTCTCGCACAAAAAGCACCTCACCCCGAACCCCCCCGACCC
AACCATAATAACCTTCAGCCCGAACCCAGTCTACACGACCGGACGCCGCG
ACCTCCCTCCCTCCAACACCACCCACAGCAACAGCAATGGCAATGGCAAC
ATACTCTCCCTCCCGCCGAGCCTCGAACCAATCCGCCAGATCCTAACGCC
CCCGCAACCCAACAAACCCTACGACCCCAAATCCCGGATAGCAGAATACC
ACCCCACCCTGCGCGGCGGACAAACGACCTACCACGGACCGGGCCAACTA
GTCGCGTACACGATTCTCGATCTACGGCGATTGGGACTCACCCCGCGGTG
CCATATACGGTTGTTGGAGAATAGTGTGATTGATGTGTTGAGGGAGTATG
GGGTGAGGGGGATGGTTACGGAGGATCCGGGGGTTTGGCTGCCGAAGAAA
ATCACGGCCGTGGGGGTACATCTCAGGAGACATATTAGTAGTTATGGGAT
TGGGTTGAATGTGACGGAGGAGCCGATGTGGTGGTTTCGACAGATTGTGG
CGTGTGGGTTAGAGGGGAGGGAGACGACGAGTTTGCAGGGGCTGGGGGTG
ACAGGGGTAACGGTTGAGGAGGTCGCGGGGATGTTTGTGGGGAAGTTTGT
TGGGAGGGTAAATGGGGATTTTGCCTGTGGGGATGGGGCTACCGGGGAGG
GGATCGAGGAGGTGTATAGGGTGAGTGAGAAGGATTTGTTGAGGGAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006464 | cellular protein modification process |
| GO:0009249 | protein lipoylation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0033819 | lipoyl(octanoyl) transferase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8519301.1 |
| Note | BUSCO:EOG09264AWW |
| DBxref | InterPro:IPR020605 |
| DBxref | InterPro:IPR004143 |
| DBxref | InterPro:IPR000544 |
| DBxref | PFAM:PF03099 |
| Product | lipoyltransferase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851930.1 | supercontig | KZ851930.1:106872..107899 + |
|
