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M747DRAFT_286011-T1, M747DRAFT_286011-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_286011-T1
Unique NameM747DRAFT_286011-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851935.1:36668..38294+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_286011-T1 ID=M747DRAFT_286011-T1|Name=M747DRAFT_286011-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1627bp|location=Sequence derived from alignment at KZ851935.1:36668..38294+ (Aspergillus niger ATCC 13496)
CCTGGCTGAAGCGCCCATCGCCGTTAGAGATTGATACCCGGGTGGATCGG
AGGGTCCCCTTGGTCTTTCCACCAATAATGGAGGTATCTCACTGCTTTGT
TCAGGAACAGAAGCTTAGCATGGACCAGTCTTTTACGTATAAAACTCTCC
AGGACTTCCGTCGTTGAGATGCTCTATCCAACAACACCTCACTCTTCCAC
TCCTTGTTCTTTCTTTCTGTTGACCAGACCCCGTCCATTCTTTTGACCGA
AACCTGTTCTGTTGACCAGAACCTATTCCAACAATCACCATGCACTCTTA
CCAGCTTCTTGGCCTGGCCGCTGTCGGCTCCCTCGTCTCTGCCGCCCCCG
CTCCTTCTCGCGTCTCCGAGTTCGCTAAGAAGGCCTCTACCTGCACCTTC
ACCTCTGCCTCTGAGGCCAGCGAGAGCATCTCCAGCTGCTCCGATGTTGT
CCTGAGCAGCATCGAGGTCCCCGCTGGCGAGACCCTGGACCTGTCCGATG
CTGCTGATGGCTCCACCGTATGTGCTCTCAACCGTCTTCCACCCTGGCTA
TCACGCTAACACCATCTAGATCACCTTCGAGGGCACCACTTCCTTCGGAT
ACAAGGAATGGAAGGGTCCCCTGATCCGCTTCGGTGGTAAGGATCTGACC
GTCACCATGGCCGACGGCGCTGTCATCGACGGTGACGGTTCCCGCTGGTG
GGACAGCAAGGGTACCAACGGTGGCAAGACCAAGCCCAAGTTCATGTACA
TCCACGACGTTGAGGACTCGACCTTCAAGGGCATCAACATCAAGAATACT
CCCGTCCAGGCCATCAGTGTCCAGGCTACCAACGTCCACCTGAACGACTT
CACCATCGACAACTCCGACGGTGATGACAACGGTGGCCACAACACCGACG
GTTTCGACATCAGCGAGTCCACCGGTGTCTACATCAGCGGTGCTACCGTC
AAGAACCAGGACGACTGCATTGCCATCAACTCTGGCGAGGTACGATATCC
CTATCCCACTATCATTCCTTCCATTCATATCGCTAACAATCAAACCCACA
GAGCATCTCTTTCACCGGCGGTACCTGCTCCGGTGGCCACGGTCTCTCCA
TCGGCTCTGTCGGTGGCCGTGATGACAACACCGTCAAGAACGTGACCATC
TCCGACTCCACTGTCAGCAACTCCGCCAATGGTGTCCGCATCAAGACCAT
CTACAAGGAGACCGGCGATGTCAGCGAGATCACCTACTCCAACATCCAGC
TCTCCGGCATCACCGACTACGGTATCGTCATCGAGCAGGACTACGAGAAC
GGCTCTCCCACCGGCACCCCCTCCACCGGTATCCCCATCACTGATGTCAC
TGTTGACGGTGTCACCGGCACTCTTGAGGATGACGCCACCCAGGTCTACA
TTCTCTGCGGTGACGGCTCTTGCTCTGACTGGACCTGGTCCGGTGTTGAC
CTCTCTGGTGGCAAGACCAGCGATAAATGCGAGAACGTTCCTTCCGGTGC
TTCTTGCTAAATCATTCCTCCGGAGGCGAGGCAACGTCTGTAGGACGTCT
GGTTGTATATATCGATCCACACTTGACATGTACTAGTTAGGTGGTTTTAC
TGCCATAGTGTTAGTGAATAATAGGAG
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Coding sequence (CDS) from alignment at KZ851935.1:36668..38294+

>M747DRAFT_286011-T1 ID=M747DRAFT_286011-T1|Name=M747DRAFT_286011-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3321bp|location=Sequence derived from alignment at KZ851935.1:36668..38294+ (Aspergillus niger ATCC 13496)
ATGCACTCTTACCAGCTTCTTGGCCTGGCCGCTGTCGGCTCCCTCGTCTC
TGCCGCCCCCGCTCCTTCTCGCGTCTCCGAGTTCGCTAAGAAGGCCTCTA
CCTGCACCTTCACCTCTGCCTCTGAGGCCAGCGAGAGCATCTCCAGCTGC
TCCGATGTTGTCCTGAGCAGCATCGAGGTCCCCGCTGGCGAGACCCTGGA
CCTGTCCGATGCTGCTGATGGCTCCACCATCACCTTCGAGGGCACCACTT
CCTTCGGATACAAGGAATGGAAGGGTCCCCTGATCCGCTTCGGTGGTAAG
GATCTGACCGTCACCATGGCCGACGGCGCTGTCATCGACGGTGACGGTTC
CCGCTGGTGGGACAGCAAGGGTACCAACGGTGGCAAGACCAAGCCCAAGT
TCATGTACATCCACGACGTTGAGGACTCGACCTTCAAGGGCATCAACATC
AAGAATACTCCCGTCCAGGCCATCAGTGTCCAGGCTACCAACGTCCACCT
GAACGACTTCACCATCGACAACTCCGACGGTGATGACAACGGTGGCCACA
ACACCGACGGTTTCGACATCAGCGAGTCCACCGGTGTCTACATCAGCGGT
GCTACCGTCAAGAACCAGGACGACTGCATTGCCATCAACTCTGGCGAGAG
CATCTCTTTCACCGGCGGTACCTGCTCCGGTGGCCACGGTCTCTCCATCG
GCTCTGTCGGTGGCCGTGATGACAACACCGTCAAGAACGTGACCATCTCC
GACTCCACTGTCAGCAACTCCGCCAATGGTGTCCGCATCAAGACCATCTA
CAAGGAGACCGGCGATGTCAGCGAGATCACCTACTCCAACATCCAGCTCT
CCGGCATCACCGACTACGGTATCGTCATCGAGCAGGACTACGAGAACGGC
TCTCCCACCGGCACCCCCTCCACCGGTATCCCCATCACTGATGTCACTGT
TGACGGTGTCACCGGCACTCTTGAGGATGACGCCACCCAGGTCTACATTC
TCTGCGGTGACGGCTCTTGCTCTGACTGGACCTGGTCCGGTGTTGACCTC
TCTGGTGGCAAGACCAGCGATAAATGCGAGAACGTTCCTTCCGGTGCTTC
TTGCTAAATGCACTCTTACCAGCTTCTTGGCCTGGCCGCTGTCGGCTCCC
TCGTCTCTGCCGCCCCCGCTCCTTCTCGCGTCTCCGAGTTCGCTAAGAAG
GCCTCTACCTGCACCTTCACCTCTGCCTCTGAGGCCAGCGAGAGCATCTC
CAGCTGCTCCGATGTTGTCCTGAGCAGCATCGAGGTCCCCGCTGGCGAGA
CCCTGGACCTGTCCGATGCTGCTGATGGCTCCACCATCACCTTCGAGGGC
ACCACTTCCTTCGGATACAAGGAATGGAAGGGTCCCCTGATCCGCTTCGG
TGGTAAGGATCTGACCGTCACCATGGCCGACGGCGCTGTCATCGACGGTG
ACGGTTCCCGCTGGTGGGACAGCAAGGGTACCAACGGTGGCAAGACCAAG
CCCAAGTTCATGTACATCCACGACGTTGAGGACTCGACCTTCAAGGGCAT
CAACATCAAGAATACTCCCGTCCAGGCCATCAGTGTCCAGGCTACCAACG
TCCACCTGAACGACTTCACCATCGACAACTCCGACGGTGATGACAACGGT
GGCCACAACACCGACGGTTTCGACATCAGCGAGTCCACCGGTGTCTACAT
CAGCGGTGCTACCGTCAAGAACCAGGACGACTGCATTGCCATCAACTCTG
GCGAGAGCATCTCTTTCACCGGCGGTACCTGCTCCGGTGGCCACGGTCTC
TCCATCGGCTCTGTCGGTGGCCGTGATGACAACACCGTCAAGAACGTGAC
CATCTCCGACTCCACTGTCAGCAACTCCGCCAATGGTGTCCGCATCAAGA
CCATCTACAAGGAGACCGGCGATGTCAGCGAGATCACCTACTCCAACATC
CAGCTCTCCGGCATCACCGACTACGGTATCGTCATCGAGCAGGACTACGA
GAACGGCTCTCCCACCGGCACCCCCTCCACCGGTATCCCCATCACTGATG
TCACTGTTGACGGTGTCACCGGCACTCTTGAGGATGACGCCACCCAGGTC
TACATTCTCTGCGGTGACGGCTCTTGCTCTGACTGGACCTGGTCCGGTGT
TGACCTCTCTGGTGGCAAGACCAGCGATAAATGCGAGAACGTTCCTTCCG
GTGCTTCTTGCTAAATGCACTCTTACCAGCTTCTTGGCCTGGCCGCTGTC
GGCTCCCTCGTCTCTGCCGCCCCCGCTCCTTCTCGCGTCTCCGAGTTCGC
TAAGAAGGCCTCTACCTGCACCTTCACCTCTGCCTCTGAGGCCAGCGAGA
GCATCTCCAGCTGCTCCGATGTTGTCCTGAGCAGCATCGAGGTCCCCGCT
GGCGAGACCCTGGACCTGTCCGATGCTGCTGATGGCTCCACCATCACCTT
CGAGGGCACCACTTCCTTCGGATACAAGGAATGGAAGGGTCCCCTGATCC
GCTTCGGTGGTAAGGATCTGACCGTCACCATGGCCGACGGCGCTGTCATC
GACGGTGACGGTTCCCGCTGGTGGGACAGCAAGGGTACCAACGGTGGCAA
GACCAAGCCCAAGTTCATGTACATCCACGACGTTGAGGACTCGACCTTCA
AGGGCATCAACATCAAGAATACTCCCGTCCAGGCCATCAGTGTCCAGGCT
ACCAACGTCCACCTGAACGACTTCACCATCGACAACTCCGACGGTGATGA
CAACGGTGGCCACAACACCGACGGTTTCGACATCAGCGAGTCCACCGGTG
TCTACATCAGCGGTGCTACCGTCAAGAACCAGGACGACTGCATTGCCATC
AACTCTGGCGAGAGCATCTCTTTCACCGGCGGTACCTGCTCCGGTGGCCA
CGGTCTCTCCATCGGCTCTGTCGGTGGCCGTGATGACAACACCGTCAAGA
ACGTGACCATCTCCGACTCCACTGTCAGCAACTCCGCCAATGGTGTCCGC
ATCAAGACCATCTACAAGGAGACCGGCGATGTCAGCGAGATCACCTACTC
CAACATCCAGCTCTCCGGCATCACCGACTACGGTATCGTCATCGAGCAGG
ACTACGAGAACGGCTCTCCCACCGGCACCCCCTCCACCGGTATCCCCATC
ACTGATGTCACTGTTGACGGTGTCACCGGCACTCTTGAGGATGACGCCAC
CCAGGTCTACATTCTCTGCGGTGACGGCTCTTGCTCTGACTGGACCTGGT
CCGGTGTTGACCTCTCTGGTGGCAAGACCAGCGATAAATGCGAGAACGTT
CCTTCCGGTGCTTCTTGCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_286011M747DRAFT_286011Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_286011-T1M747DRAFT_286011-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_286011-T1.utr5p1M747DRAFT_286011-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_286011-T1.exon1M747DRAFT_286011-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_286011-T1.exon2M747DRAFT_286011-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_286011-T1.exon3M747DRAFT_286011-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_286011-T1.cdsM747DRAFT_286011-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_286011-T1.utr3p1M747DRAFT_286011-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteSECRETED:SignalP(1-18)
NoteCAZy:GH28
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR000743
DBxrefInterPro:IPR012334
DBxrefInterPro:IPR006626
DBxrefPFAM:PF00295
Productpolygalacturonase pgaI
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851935.1supercontigKZ851935.1:36668..38294 +
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