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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851940.1:144931..147156- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_287057-T1 ID=M747DRAFT_287057-T1|Name=M747DRAFT_287057-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2226bp|location=Sequence derived from alignment at KZ851940.1:144931..147156- (Aspergillus niger ATCC 13496)
GTTGGGTAGTAGAAGTTAAAGGCGTGGTCGTCATCGTGCGTGCTAGTGTC
ACCGTGCAAGGCAAACAGCCAGAACAGAGCAAAGAGAGGATAGACAGCCA
CGAGAGGCGAGGGTGGTGCGATCGAAAGGTGGATGCCGCCTTTTTCGGGC
TGCCAGAAGAAATCCAGAAGGAAAGCAAAAGTGCCGCCGTTTTGCTGCTT
TTCGGCCTCCGCTTGTCTTTCACTCCTTCATCTTCCATTCCAACACCAAT
CCTCCTACTGTCCCAGCTTCTCTTCTGACTTGTGCGCTGGACGGATATCT
TTTGGATAACCGTGTCAATATCCGATCCCACTCAAACAAATCATCTGTGA
CCGTTCTTGTCGGATCTAAACTGTCGGAGTATCTGCGCACCCCCCACTCT
CTGCGCCCATCATGATGCACCCGTCGAGACAGGCGTACGTGGAGGAAGCT
GAGGTGAGCGATTGTTTTTTTCCTTCATCTGTTTTCTCATGGTGCTTGGA
TAGAAAAGCGCCGGGGGAATCCTCTGTTGACAATGCATATTCTGACGTCG
GTTCCAGGACACGGACATGGGCATTGACTTGGCGAACATCCGTAAGTATT
GCGCCTCTACCGAGATCCTACGTCGCTATGTCATATATACCGTATCAGTT
GCTTATTTTCAATCTGTTTAGCCGTCGACCGCAATTATGACCTCCCCTCC
GCCGCGGCGGGCATTCCGCCCGAAAGAGCGTCAGCCATCTTGTCACAGTT
TGAAAGGAAGCGAAGAGCCGCAGCCATGGCGGTTCCGACGGATGATGGCC
GGGTGCGCGCACGACTACGCGAACTGGGTGAACCGATTACACTGTTTGGA
GAAGGCCCTGCAGACCGGAGAGACCGACTGCGGGAATTGTTGACCGATCT
GGCAGAACGACAAGAAGCGGCGGCGGCAGAGGGCGATGTTGAGATGATGG
AGGCTATGGGCGAAGGGGACGAAGCTGAAGAGGAGGCAGAGCAGCAGGAG
GAATTCTATACGGAGGGCACCAATGAGCTCTTGCAAGCCCGGAAGGACAT
TGCGCGTTTCTCGCTACCTCGCGCAAAGGCGCGCGTGGCCCGACTGAGAG
AGGAATCGACAATACCTCTACGGACGCATATCAAGCATCGAAAGGCGATC
AAGCAAAAGCTACATAACTTCGATCTGTACGGGTCCCAGATTGCGGGCGA
CCGCCCTGTCAGTATCTGTCGGTTCTCCCCCGACGGGCAAACTATCGCGA
CCGGTAACTGGGGCGGTGGCATCCGCTTGCTTACAGTGCCCAACCTTGAA
GAGAAGCTGTCACTCCAGGCACATAATGATCGAGTCGGTGGGCTTTCATG
GTTCCCCGGAGCTACGTTGCCTACATCGAATGTTTCGGAGTCGACGGTGA
ATCTAGTGTCGGGAGGAGGTGAAGGAAATGTTCGTTTGTGGTCTCTAGAC
AAGGACCAGCCCTTGGCGACGCTGTCTGGCCACAGCGGCCGTGTCTGCCG
GACCGAGTTCCACCCATCGGGTCGATATGTTGCCTCCGCTTCTTACGATA
CCACCTGGCGGCTGTGGGACGTGGAAACTACGGCCGAGCTCTTGTTGCAA
GAAGGTCATTCCCGTGAGGTCTACACAGTCGCATTCAACAACGACGGCTC
GCTCCTGGCGAGTGGCGGATTGGACAGTATCGGACGAATTTGGGATCTCC
GGACGGGCCGCACGGTCATGATTCTGGAGGGGCATATTCGGGAAATCTTC
GGTATGGATTGGGGCGTGGATGGCTATCGAGTGTTGTCCGGTTCGGGCGA
TGGTTGGGTCAAGTGCTGGGACTTGCGTCAAGTTCGGAATAGCGGTGGCA
TTGGAGCGCATAAGAGCGTGGTGTCTGATCTCCGTTGGTATAAGGGCGCG
GAGTCGGACTCATTTCTTCCCTCTGCGGAGGGCCGCATGGATGTTGACGG
GGCCACGCCAACGGATGAAGCTCCTGCGCCTGTGCAGCCGAAGAAGTCGG
GCACCTTCTTCGTGAGCAGTGGCTTCGACAAGAACGTGAATATCTTTAGC
GCAGATGACTGGTCGTTGGTGAAGACGTTGAGTGGACATGCGGGCAATGT
CCTCAGCACAGACATCAGCGCCGATGCGCAGTGGATTGCCAGCTGCGGAC
ATGACCGAACGGTGAAGCTCTGGGGGATTGAATGATGTACATGTACTATA
GAAGAATCAAGTGATAATGACTGCCC back to topCoding sequence (CDS) from alignment at KZ851940.1:144931..147156- >M747DRAFT_287057-T1 ID=M747DRAFT_287057-T1|Name=M747DRAFT_287057-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4770bp|location=Sequence derived from alignment at KZ851940.1:144931..147156- (Aspergillus niger ATCC 13496)
CCGTCGACCGCAATTATGACCTCCCCTCCGCCGCGGCGGGCATTCCGCCC
GAAAGAGCGTCAGCCATCTTGTCACAGTTTGAAAGGAAGCGAAGAGCCGC
AGCCATGGCGGTTCCGACGGATGATGGCCGGGTGCGCGCACGACTACGCG
AACTGGGTGAACCGATTACACTGTTTGGAGAAGGCCCTGCAGACCGGAGA
GACCGACTGCGGGAATTGTTGACCGATCTGGCAGAACGACAAGAAGCGGC
GGCGGCAGAGGGCGATGTTGAGATGATGGAGGCTATGGGCGAAGGGGACG
AAGCTGAAGAGGAGGCAGAGCAGCAGGAGGAATTCTATACGGAGGGCACC
AATGAGCTCTTGCAAGCCCGGAAGGACATTGCGCGTTTCTCGCTACCTCG
CGCAAAGGCGCGCGTGGCCCGACTGAGAGAGGAATCGACAATACCTCTAC
GGACGCATATCAAGCATCGAAAGGCGATCAAGCAAAAGCTACATAACTTC
GATCTGTACGGGTCCCAGATTGCGGGCGACCGCCCTGTCAGTATCTGTCG
GTTCTCCCCCGACGGGCAAACTATCGCGACCGGTAACTGGGGCGGTGGCA
TCCGCTTGCTTACAGTGCCCAACCTTGAAGAGAAGCTGTCACTCCAGGCA
CATAATGATCGAGTCGGTGGGCTTTCATGGTTCCCCGGAGCTACGTTGCC
TACATCGAATGTTTCGGAGTCGACGGTGAATCTAGTGTCGGGAGGAGGTG
AAGGAAATGTTCGTTTGTGGTCTCTAGACAAGGACCAGCCCTTGGCGACG
CTGTCTGGCCACAGCGGCCGTGTCTGCCGGACCGAGTTCCACCCATCGGG
TCGATATGTTGCCTCCGCTTCTTACGATACCACCTGGCGGCTGTGGGACG
TGGAAACTACGGCCGAGCTCTTGTTGCAAGAAGGTCATTCCCGTGAGGTC
TACACAGTCGCATTCAACAACGACGGCTCGCTCCTGGCGAGTGGCGGATT
GGACAGTATCGGACGAATTTGGGATCTCCGGACGGGCCGCACGGTCATGA
TTCTGGAGGGGCATATTCGGGAAATCTTCGGTATGGATTGGGGCGTGGAT
GGCTATCGAGTGTTGTCCGGTTCGGGCGATGGTTGGGTCAAGTGCTGGGA
CTTGCGTCAAGTTCGGAATAGCGGTGGCATTGGAGCGCATAAGAGCGTGG
TGTCTGATCTCCGTTGGTATAAGGGCGCGGAGTCGGACTCATTTCTTCCC
TCTGCGGAGGGCCGCATGGATGTTGACGGGGCCACGCCAACGGATGAAGC
TCCTGCGCCTGTGCAGCCGAAGAAGTCGGGCACCTTCTTCGTGAGCAGTG
GCTTCGACAAGAACGTGAATATCTTTAGCGCAGATGACTGGTCGTTGGTG
AAGACGTTGAGTGGACATGCGGGCAATGTCCTCAGCACAGACATCAGCGC
CGATGCGCAGTGGATTGCCAGCTGCGGACATGACCGAACGGTGAAGCTCT
GGGGGATTGAATGAGACACGGACATGGGCATTGACTTGGCGAACATCCAT
GATGCACCCGTCGAGACAGGCGTACGTGGAGGAAGCTGAGCCGTCGACCG
CAATTATGACCTCCCCTCCGCCGCGGCGGGCATTCCGCCCGAAAGAGCGT
CAGCCATCTTGTCACAGTTTGAAAGGAAGCGAAGAGCCGCAGCCATGGCG
GTTCCGACGGATGATGGCCGGGTGCGCGCACGACTACGCGAACTGGGTGA
ACCGATTACACTGTTTGGAGAAGGCCCTGCAGACCGGAGAGACCGACTGC
GGGAATTGTTGACCGATCTGGCAGAACGACAAGAAGCGGCGGCGGCAGAG
GGCGATGTTGAGATGATGGAGGCTATGGGCGAAGGGGACGAAGCTGAAGA
GGAGGCAGAGCAGCAGGAGGAATTCTATACGGAGGGCACCAATGAGCTCT
TGCAAGCCCGGAAGGACATTGCGCGTTTCTCGCTACCTCGCGCAAAGGCG
CGCGTGGCCCGACTGAGAGAGGAATCGACAATACCTCTACGGACGCATAT
CAAGCATCGAAAGGCGATCAAGCAAAAGCTACATAACTTCGATCTGTACG
GGTCCCAGATTGCGGGCGACCGCCCTGTCAGTATCTGTCGGTTCTCCCCC
GACGGGCAAACTATCGCGACCGGTAACTGGGGCGGTGGCATCCGCTTGCT
TACAGTGCCCAACCTTGAAGAGAAGCTGTCACTCCAGGCACATAATGATC
GAGTCGGTGGGCTTTCATGGTTCCCCGGAGCTACGTTGCCTACATCGAAT
GTTTCGGAGTCGACGGTGAATCTAGTGTCGGGAGGAGGTGAAGGAAATGT
TCGTTTGTGGTCTCTAGACAAGGACCAGCCCTTGGCGACGCTGTCTGGCC
ACAGCGGCCGTGTCTGCCGGACCGAGTTCCACCCATCGGGTCGATATGTT
GCCTCCGCTTCTTACGATACCACCTGGCGGCTGTGGGACGTGGAAACTAC
GGCCGAGCTCTTGTTGCAAGAAGGTCATTCCCGTGAGGTCTACACAGTCG
CATTCAACAACGACGGCTCGCTCCTGGCGAGTGGCGGATTGGACAGTATC
GGACGAATTTGGGATCTCCGGACGGGCCGCACGGTCATGATTCTGGAGGG
GCATATTCGGGAAATCTTCGGTATGGATTGGGGCGTGGATGGCTATCGAG
TGTTGTCCGGTTCGGGCGATGGTTGGGTCAAGTGCTGGGACTTGCGTCAA
GTTCGGAATAGCGGTGGCATTGGAGCGCATAAGAGCGTGGTGTCTGATCT
CCGTTGGTATAAGGGCGCGGAGTCGGACTCATTTCTTCCCTCTGCGGAGG
GCCGCATGGATGTTGACGGGGCCACGCCAACGGATGAAGCTCCTGCGCCT
GTGCAGCCGAAGAAGTCGGGCACCTTCTTCGTGAGCAGTGGCTTCGACAA
GAACGTGAATATCTTTAGCGCAGATGACTGGTCGTTGGTGAAGACGTTGA
GTGGACATGCGGGCAATGTCCTCAGCACAGACATCAGCGCCGATGCGCAG
TGGATTGCCAGCTGCGGACATGACCGAACGGTGAAGCTCTGGGGGATTGA
ATGAGACACGGACATGGGCATTGACTTGGCGAACATCCATGATGCACCCG
TCGAGACAGGCGTACGTGGAGGAAGCTGAGCCGTCGACCGCAATTATGAC
CTCCCCTCCGCCGCGGCGGGCATTCCGCCCGAAAGAGCGTCAGCCATCTT
GTCACAGTTTGAAAGGAAGCGAAGAGCCGCAGCCATGGCGGTTCCGACGG
ATGATGGCCGGGTGCGCGCACGACTACGCGAACTGGGTGAACCGATTACA
CTGTTTGGAGAAGGCCCTGCAGACCGGAGAGACCGACTGCGGGAATTGTT
GACCGATCTGGCAGAACGACAAGAAGCGGCGGCGGCAGAGGGCGATGTTG
AGATGATGGAGGCTATGGGCGAAGGGGACGAAGCTGAAGAGGAGGCAGAG
CAGCAGGAGGAATTCTATACGGAGGGCACCAATGAGCTCTTGCAAGCCCG
GAAGGACATTGCGCGTTTCTCGCTACCTCGCGCAAAGGCGCGCGTGGCCC
GACTGAGAGAGGAATCGACAATACCTCTACGGACGCATATCAAGCATCGA
AAGGCGATCAAGCAAAAGCTACATAACTTCGATCTGTACGGGTCCCAGAT
TGCGGGCGACCGCCCTGTCAGTATCTGTCGGTTCTCCCCCGACGGGCAAA
CTATCGCGACCGGTAACTGGGGCGGTGGCATCCGCTTGCTTACAGTGCCC
AACCTTGAAGAGAAGCTGTCACTCCAGGCACATAATGATCGAGTCGGTGG
GCTTTCATGGTTCCCCGGAGCTACGTTGCCTACATCGAATGTTTCGGAGT
CGACGGTGAATCTAGTGTCGGGAGGAGGTGAAGGAAATGTTCGTTTGTGG
TCTCTAGACAAGGACCAGCCCTTGGCGACGCTGTCTGGCCACAGCGGCCG
TGTCTGCCGGACCGAGTTCCACCCATCGGGTCGATATGTTGCCTCCGCTT
CTTACGATACCACCTGGCGGCTGTGGGACGTGGAAACTACGGCCGAGCTC
TTGTTGCAAGAAGGTCATTCCCGTGAGGTCTACACAGTCGCATTCAACAA
CGACGGCTCGCTCCTGGCGAGTGGCGGATTGGACAGTATCGGACGAATTT
GGGATCTCCGGACGGGCCGCACGGTCATGATTCTGGAGGGGCATATTCGG
GAAATCTTCGGTATGGATTGGGGCGTGGATGGCTATCGAGTGTTGTCCGG
TTCGGGCGATGGTTGGGTCAAGTGCTGGGACTTGCGTCAAGTTCGGAATA
GCGGTGGCATTGGAGCGCATAAGAGCGTGGTGTCTGATCTCCGTTGGTAT
AAGGGCGCGGAGTCGGACTCATTTCTTCCCTCTGCGGAGGGCCGCATGGA
TGTTGACGGGGCCACGCCAACGGATGAAGCTCCTGCGCCTGTGCAGCCGA
AGAAGTCGGGCACCTTCTTCGTGAGCAGTGGCTTCGACAAGAACGTGAAT
ATCTTTAGCGCAGATGACTGGTCGTTGGTGAAGACGTTGAGTGGACATGC
GGGCAATGTCCTCAGCACAGACATCAGCGCCGATGCGCAGTGGATTGCCA
GCTGCGGACATGACCGAACGGTGAAGCTCTGGGGGATTGAATGAGACACG
GACATGGGCATTGACTTGGCGAACATCCATGATGCACCCGTCGAGACAGG
CGTACGTGGAGGAAGCTGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262CXO |
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR019775 |
| DBxref | InterPro:IPR036285 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| DBxref | InterPro:IPR014906 |
| DBxref | InterPro:IPR020472 |
| DBxref | PFAM:PF00400 |
| DBxref | PFAM:PF08799 |
| Product | pre-mRNA splicing factor |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851940.1 | supercontig | KZ851940.1:144931..147156 - |
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