You are here

M747DRAFT_287723-T1, M747DRAFT_287723-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_287723-T1
Unique NameM747DRAFT_287723-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851944.1:72840..74195+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_287723-T1 ID=M747DRAFT_287723-T1|Name=M747DRAFT_287723-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1356bp|location=Sequence derived from alignment at KZ851944.1:72840..74195+ (Aspergillus niger ATCC 13496)
CTCTAGGTTTGGCTCTGGTGTATACGACTAATGAGTGTTTCCGAGTACAT TCGATTTGTTTGATTCTGCGATTAGACACACCCAATTCCCTGCGATCAAC CATCGTCAACCGCATCCCAATCTACTGCCATCACAATGAACAACAGGCCT GTCGAACAAGCGCTGGCCACGCTACTGCCTACACACGCTCAAGACCTCCC ACAAGAACTTCTTAGTCTCGCCATATCACTCGTCGCCCAATCGCGCAGCT TCTCCAGCAGTCTCAAGCCCGAAGAAGAGATCGCTCGGCCGTATGCGTGC GCTGAAATCGCTTGCAAAAGGTGTGTAGAACGCCATTCTTGACAAACCAG AACCTGGTCAACATGGATGATTCTAACCATTCCTCACGATGATAGATTAA CTCGCGCTCTCAAACTCCCTCCTCTCCTTGGCCACCCGCCATGTCCTCCC CGCGCCTACAAAAACCTCTACGCCTTCCTTGACCGATCCCTATCCACTGG AATTTCCCGCGCAAGTGCCTCAGCCCCAGGGACACCGTCTCGCGCTGGAT CAGCACCATCAACACCGAGAAAGGGCACACAAAGGACTCCGTCAAAGACT GCCGCAACTGCTACTCCGCGAGGGCTACAACAACAACAACAACACCACCA ACAGAACACACCTACGAAATCCACCCCTCTCAAGCGCGCTCTCTCACACA CCGACAACGACAAGCCCTCGCCATCACCTCGACCCCAGAAAATCCCCAAA TTCCGCGCGAATGGCCTCTCCGGCTCAACTATCATCCCCGACGCCCCTAG CTGGGTGATGACTTCCATCCGAACAGTTTGCAAGACGCTTTCGACGCCCG CACCGCGCATGAGCACGTGGTCTCGGCCGCCTATCTCACGGACTCTCCCG CCACATATCTTCGCCGGTGTATCTTCCATTCTGTATATGATTTCCGAAGC GACGGCGAAACACGACGAAGAAATTGACGAGGAGATGATGGAGTTTCTGG AGCCGGTGATCACAGCCAAGGATAAAGAGAATGATGAAGATTTCAAGGAC ATTATCAATGCCTTGATTGTTGCAGTGTACTTCCTCGTCCTTGCTCGTCG ACGCCAACCGGGCCCTTCGTCAACCGGGGATAGTGCCGAGGCAGTGGAAG CGAAGAAAATGGATAAGAAGACGTTCTCGGAGATGCGACAGACTGCGCTG GTTAGTCTTGGGCTTCCGTCAACGGAGAGGCGGCATCGGGAGGATGTGGA TCAGTGGATTGCGCTGGTTATGGAGCAGGGGTGGGCTCATGGCAAGGAGT GGTTTGAGAATGTGCCGTTAGCTGGGGAGTTAGATGGAGATGAGAGGGAT TTAGGG
back to top

Coding sequence (CDS) from alignment at KZ851944.1:72840..74195+

>M747DRAFT_287723-T1 ID=M747DRAFT_287723-T1|Name=M747DRAFT_287723-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2292bp|location=Sequence derived from alignment at KZ851944.1:72840..74195+ (Aspergillus niger ATCC 13496)
ATGAACAACAGGCCTGTCGAACAAGCGCTGGCCACGCTACTGCCTACACA
CGCTCAAGACCTCCCACAAGAACTTCTTAGTCTCGCCATATCACTCGTCG
CCCAATCGCGCAGCTTCTCCAGCAGTCTCAAGCCCGAAGAAGAGATCGCT
CGGCCGTATGCGTGCGCTGAAATCGCTTGCAAAAGATTAACTCGCGCTCT
CAAACTCCCTCCTCTCCTTGGCCACCCGCCATGTCCTCCCCGCGCCTACA
AAAACCTCTACGCCTTCCTTGACCGATCCCTATCCACTGGAATTTCCCGC
GCAAGTGCCTCAGCCCCAGGGACACCGTCTCGCGCTGGATCAGCACCATC
AACACCGAGAAAGGGCACACAAAGGACTCCGTCAAAGACTGCCGCAACTG
CTACTCCGCGAGGGCTACAACAACAACAACAACACCACCAACAGAACACA
CCTACGAAATCCACCCCTCTCAAGCGCGCTCTCTCACACACCGACAACGA
CAAGCCCTCGCCATCACCTCGACCCCAGAAAATCCCCAAATTCCGCGCGA
ATGGCCTCTCCGGCTCAACTATCATCCCCGACGCCCCTAGCTGGGTGATG
ACTTCCATCCGAACAGTTTGCAAGACGCTTTCGACGCCCGCACCGCGCAT
GAGCACGTGGTCTCGGCCGCCTATCTCACGGACTCTCCCGCCACATATCT
TCGCCGGTGTATCTTCCATTCTGTATATGATTTCCGAAGCGACGGCGAAA
CACGACGAAGAAATTGACGAGGAGATGATGGAGTTTCTGGAGCCGGTGAT
CACAGCCAAGGATAAAGAGAATGATGAAGATTTCAAGGACATTATCAATG
CCTTGATTGTTGCAGTGTACTTCCTCGTCCTTGCTCGTCGACGCCAACCG
GGCCCTTCGTCAACCGGGGATAGTGCCGAGGCAGTGGAAGCGAAGAAAAT
GGATAAGAAGACGTTCTCGGAGATGCGACAGACTGCGCTGGTTAGTCTTG
GGCTTCCGTCAACGGAGAGGCGGCATCGGGAGGATGTGGATCAGTGGATT
GCGCTGGTTATGGAGCAGGGGTGGGCTCATGGCAAGGAGTGGTTTGAGAA
TGTGCCGTTAGCTGGGGAGTTAGATGGAGATGAGAGGGATTTAGGGATGA
ACAACAGGCCTGTCGAACAAGCGCTGGCCACGCTACTGCCTACACACGCT
CAAGACCTCCCACAAGAACTTCTTAGTCTCGCCATATCACTCGTCGCCCA
ATCGCGCAGCTTCTCCAGCAGTCTCAAGCCCGAAGAAGAGATCGCTCGGC
CGTATGCGTGCGCTGAAATCGCTTGCAAAAGATTAACTCGCGCTCTCAAA
CTCCCTCCTCTCCTTGGCCACCCGCCATGTCCTCCCCGCGCCTACAAAAA
CCTCTACGCCTTCCTTGACCGATCCCTATCCACTGGAATTTCCCGCGCAA
GTGCCTCAGCCCCAGGGACACCGTCTCGCGCTGGATCAGCACCATCAACA
CCGAGAAAGGGCACACAAAGGACTCCGTCAAAGACTGCCGCAACTGCTAC
TCCGCGAGGGCTACAACAACAACAACAACACCACCAACAGAACACACCTA
CGAAATCCACCCCTCTCAAGCGCGCTCTCTCACACACCGACAACGACAAG
CCCTCGCCATCACCTCGACCCCAGAAAATCCCCAAATTCCGCGCGAATGG
CCTCTCCGGCTCAACTATCATCCCCGACGCCCCTAGCTGGGTGATGACTT
CCATCCGAACAGTTTGCAAGACGCTTTCGACGCCCGCACCGCGCATGAGC
ACGTGGTCTCGGCCGCCTATCTCACGGACTCTCCCGCCACATATCTTCGC
CGGTGTATCTTCCATTCTGTATATGATTTCCGAAGCGACGGCGAAACACG
ACGAAGAAATTGACGAGGAGATGATGGAGTTTCTGGAGCCGGTGATCACA
GCCAAGGATAAAGAGAATGATGAAGATTTCAAGGACATTATCAATGCCTT
GATTGTTGCAGTGTACTTCCTCGTCCTTGCTCGTCGACGCCAACCGGGCC
CTTCGTCAACCGGGGATAGTGCCGAGGCAGTGGAAGCGAAGAAAATGGAT
AAGAAGACGTTCTCGGAGATGCGACAGACTGCGCTGGTTAGTCTTGGGCT
TCCGTCAACGGAGAGGCGGCATCGGGAGGATGTGGATCAGTGGATTGCGC
TGGTTATGGAGCAGGGGTGGGCTCATGGCAAGGAGTGGTTTGAGAATGTG
CCGTTAGCTGGGGAGTTAGATGGAGATGAGAGGGATTTAGGG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005664nuclear origin of replication recognition complex
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_287723M747DRAFT_287723Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_287723-T1.utr5p1M747DRAFT_287723-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_287723-T1.exon1M747DRAFT_287723-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_287723-T1.exon2M747DRAFT_287723-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_287723-T1.cdsM747DRAFT_287723-T1.cdsAspergillus niger ATCC 13496CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_287723-T1M747DRAFT_287723-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR008721
DBxrefPFAM:PF05460
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851944.1supercontigKZ851944.1:72840..74195 +