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M747DRAFT_287874-T1, M747DRAFT_287874-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_287874-T1
Unique NameM747DRAFT_287874-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851945.1:11402..13487-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_287874-T1 ID=M747DRAFT_287874-T1|Name=M747DRAFT_287874-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2086bp|location=Sequence derived from alignment at KZ851945.1:11402..13487- (Aspergillus niger ATCC 13496)
CCTCCATTCGTTCTCTCCTGTCCTCTCTGCCACCTTTCACGATTTCTGGC
AGCAAGTGACGCATATTTTAATCTGTACATGCTTTAATTTGATTTACCTC
CTTTCGACAAGAACTCCCCCGCCATGGTCCTTCAGGATCTCGGGCGGCGA
ATCAACGCCGCCGTCAATGACCTGACTCGCTCTAACAATTTGGACGAGAA
GGTGAGGATCAGCACTTTTCTCTCTGTCTGATGTATGTACTGACTGTTAG
CAGGCCTTTGATGACATGATCAAAGAGATCTGCGCCGCCTTGCTGTCCGC
CGACGTCAACGTCCGCCTGGTCCAGTCCCTCCGCAAATCCATCAAGTCCA
GCGTCAACTTTGCCTCTCTTCCTCCCGCCGTGAACAAGAAGCGTTTGATT
CAGAAGGCCGTCTTCGATGAGCTGGTTTCCCTGGTTGATCCCCATGCGGA
GCCATTCCGTCCCAAGAAGGGCCGCTCCAACGTGATCATGTTCGTCGGTC
TACAGGGTGCCGGTAAAACCACCACCTGTACCAAGCTGGCCCGCCACTAT
CAGATGCGCGGCTTCAAGACCGCCCTCGTCTGTGCCGATACCTTCCGAGC
TGGTGCTTTCGACCAGCTGAAACAGAATGCCACCAAGGCCAAGATCCCCT
ACTACGGTAGCCTGACGCAAACCGACCCCGCCATCGTGGCAGCCGAGGGT
GTGGCCAAGTTCAAGAAGGAGCGTTTCGAAATCATCATTGTCGATACCAG
TGGTCGTCATAAGCAGGAAGAAGAGCTCTTCACCGAAATGACCCAGATTC
AGACCGCCGTCACCCCCGACCAGACCATCCTCGTCCTCGACAGCACCATC
GGTCAGGCTGCCGAAGCCCAGTCCTCCGCCTTCAAGGCCACCGCAGACTT
CGGAGCCATCATCATCACCAAGACGGATGGTCACGCCGCAGGTGGTGGTG
CTATTTCCGCCGTCGCCGCCACACACACTCCCATTATCTACCTCGGTACC
GGTGAGCACTTGATGGACCTGGAACGTTTCGAGCCCAAGGCCTTCATCCA
GAAGCTCCTGGGTATGGGTGATATGGCCGGACTGGTAGAGCACGTACAAG
CCGTGACCAAGGACTCGGCCTCCGCCAAGGAAACATACAAGCACATCTCA
GAAGGTATCTACACGCTGCGCGACTTCCGCGAGAACATCACCTCCATCAT
GAAGATGGGTCCTCTCTCCAAGCTCTCCGGCATGATTCCCGGTCTCTCCA
ACCTGACCGCGGGACTTGATGACGAAGACGGCTCCATGAAGCTCCGCCGC
ATGATCTACATTTTCGACAGCATGACGGCCGCCGAACTCGACGGCGACGG
CAAGATGTTCGTCGAACAGCCTAGCCGCATGGTCCGGATCGCTTGCGGAA
GCGGTACCACCGTCCGCGAAGTCGAAGACCTGCTCTCCCAGCACCGCATG
ATGGCTGGTATGGCCAAGCGCGTCGGCGGACAGAAGAAGCAGATGCAGCG
TGCCCAGAACATGCTCAAGGGCGGTAACAAGGAACAGCAGCTCGCCGCCA
TGCAGAAGCGCATGGCCGCCATGGGTGGTGCTGGCGGTGGTGGATTCCCC
GGTATGCCCGGCATGGGCGACATGGCCAAGATGATGCAAATGCTGCAAGG
TCAAGGAGGTGGCGGCGGTGGTGGTCTTCCCGGCCTGGGTGGGATGGACC
TACAAAGTATGATGAGCCAGATGAGTGGATTGATGGGCGGTGGCGGTGGT
GGTGGTGGCCGCGGTAGAGGACGGTGATTGTGATGATGACGATGATGCAC
GCATTCTGAAATTCCTTCTTGACTTTTGATTTCGCGTTGTTACCATTCCA
TGATTATATTCTACACCTGTGCTCCGTCTCTTTTTTACGTTTGATTCTTA
AGAGACTGGGATATATGGCCTTGCTTCAGTTCAGTCATCATTCACCTCAT
TCGTCGATTGTAACTAGCATATGATGGTGTTGGGCGTGACTTGATTTTAC
TTGTGCTTACCTCTTTGCTAATATCCGACTGGCCCTCTGGGGCATCAAAT
CTATGCTATCAAAGCTCATTTCCCATTCTTTCCAGG
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Coding sequence (CDS) from alignment at KZ851945.1:11402..13487-

>M747DRAFT_287874-T1 ID=M747DRAFT_287874-T1|Name=M747DRAFT_287874-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3204bp|location=Sequence derived from alignment at KZ851945.1:11402..13487- (Aspergillus niger ATCC 13496)
GCCTTTGATGACATGATCAAAGAGATCTGCGCCGCCTTGCTGTCCGCCGA
CGTCAACGTCCGCCTGGTCCAGTCCCTCCGCAAATCCATCAAGTCCAGCG
TCAACTTTGCCTCTCTTCCTCCCGCCGTGAACAAGAAGCGTTTGATTCAG
AAGGCCGTCTTCGATGAGCTGGTTTCCCTGGTTGATCCCCATGCGGAGCC
ATTCCGTCCCAAGAAGGGCCGCTCCAACGTGATCATGTTCGTCGGTCTAC
AGGGTGCCGGTAAAACCACCACCTGTACCAAGCTGGCCCGCCACTATCAG
ATGCGCGGCTTCAAGACCGCCCTCGTCTGTGCCGATACCTTCCGAGCTGG
TGCTTTCGACCAGCTGAAACAGAATGCCACCAAGGCCAAGATCCCCTACT
ACGGTAGCCTGACGCAAACCGACCCCGCCATCGTGGCAGCCGAGGGTGTG
GCCAAGTTCAAGAAGGAGCGTTTCGAAATCATCATTGTCGATACCAGTGG
TCGTCATAAGCAGGAAGAAGAGCTCTTCACCGAAATGACCCAGATTCAGA
CCGCCGTCACCCCCGACCAGACCATCCTCGTCCTCGACAGCACCATCGGT
CAGGCTGCCGAAGCCCAGTCCTCCGCCTTCAAGGCCACCGCAGACTTCGG
AGCCATCATCATCACCAAGACGGATGGTCACGCCGCAGGTGGTGGTGCTA
TTTCCGCCGTCGCCGCCACACACACTCCCATTATCTACCTCGGTACCGGT
GAGCACTTGATGGACCTGGAACGTTTCGAGCCCAAGGCCTTCATCCAGAA
GCTCCTGGGTATGGGTGATATGGCCGGACTGGTAGAGCACGTACAAGCCG
TGACCAAGGACTCGGCCTCCGCCAAGGAAACATACAAGCACATCTCAGAA
GGTATCTACACGCTGCGCGACTTCCGCGAGAACATCACCTCCATCATGAA
GATGGGTCCTCTCTCCAAGCTCTCCGGCATGATTCCCGGTCTCTCCAACC
TGACCGCGGGACTTGATGACGAAGACGGCTCCATGAAGCTCCGCCGCATG
ATCTACATTTTCGACAGCATGACGGCCGCCGAACTCGACGGCGACGGCAA
GATGTTCGTCGAACAGCCTAGCCGCATGGTCCGGATCGCTTGCGGAAGCG
GTACCACCGTCCGCGAAGTCGAAGACCTGCTCTCCCAGCACCGCATGATG
GCTGGTATGGCCAAGCGCGTCGGCGGACAGAAGAAGCAGATGCAGCGTGC
CCAGAACATGCTCAAGGGCGGTAACAAGGAACAGCAGCTCGCCGCCATGC
AGAAGCGCATGGCCGCCATGGGTGGTGCTGGCGGTGGTGGATTCCCCGGT
ATGCCCGGCATGGGCGACATGGCCAAGATGATGCAAATGCTGCAAGGTCA
AGGAGGTGGCGGCGGTGGTGGTCTTCCCGGCCTGGGTGGGATGGACCTAC
AAAGTATGATGAGCCAGATGAGTGGATTGATGGGCGGTGGCGGTGGTGGT
GGTGGCCGCGGTAGAGGACGGTGAATGGTCCTTCAGGATCTCGGGCGGCG
AATCAACGCCGCCGTCAATGACCTGACTCGCTCTAACAATTTGGACGAGA
AGGCCTTTGATGACATGATCAAAGAGATCTGCGCCGCCTTGCTGTCCGCC
GACGTCAACGTCCGCCTGGTCCAGTCCCTCCGCAAATCCATCAAGTCCAG
CGTCAACTTTGCCTCTCTTCCTCCCGCCGTGAACAAGAAGCGTTTGATTC
AGAAGGCCGTCTTCGATGAGCTGGTTTCCCTGGTTGATCCCCATGCGGAG
CCATTCCGTCCCAAGAAGGGCCGCTCCAACGTGATCATGTTCGTCGGTCT
ACAGGGTGCCGGTAAAACCACCACCTGTACCAAGCTGGCCCGCCACTATC
AGATGCGCGGCTTCAAGACCGCCCTCGTCTGTGCCGATACCTTCCGAGCT
GGTGCTTTCGACCAGCTGAAACAGAATGCCACCAAGGCCAAGATCCCCTA
CTACGGTAGCCTGACGCAAACCGACCCCGCCATCGTGGCAGCCGAGGGTG
TGGCCAAGTTCAAGAAGGAGCGTTTCGAAATCATCATTGTCGATACCAGT
GGTCGTCATAAGCAGGAAGAAGAGCTCTTCACCGAAATGACCCAGATTCA
GACCGCCGTCACCCCCGACCAGACCATCCTCGTCCTCGACAGCACCATCG
GTCAGGCTGCCGAAGCCCAGTCCTCCGCCTTCAAGGCCACCGCAGACTTC
GGAGCCATCATCATCACCAAGACGGATGGTCACGCCGCAGGTGGTGGTGC
TATTTCCGCCGTCGCCGCCACACACACTCCCATTATCTACCTCGGTACCG
GTGAGCACTTGATGGACCTGGAACGTTTCGAGCCCAAGGCCTTCATCCAG
AAGCTCCTGGGTATGGGTGATATGGCCGGACTGGTAGAGCACGTACAAGC
CGTGACCAAGGACTCGGCCTCCGCCAAGGAAACATACAAGCACATCTCAG
AAGGTATCTACACGCTGCGCGACTTCCGCGAGAACATCACCTCCATCATG
AAGATGGGTCCTCTCTCCAAGCTCTCCGGCATGATTCCCGGTCTCTCCAA
CCTGACCGCGGGACTTGATGACGAAGACGGCTCCATGAAGCTCCGCCGCA
TGATCTACATTTTCGACAGCATGACGGCCGCCGAACTCGACGGCGACGGC
AAGATGTTCGTCGAACAGCCTAGCCGCATGGTCCGGATCGCTTGCGGAAG
CGGTACCACCGTCCGCGAAGTCGAAGACCTGCTCTCCCAGCACCGCATGA
TGGCTGGTATGGCCAAGCGCGTCGGCGGACAGAAGAAGCAGATGCAGCGT
GCCCAGAACATGCTCAAGGGCGGTAACAAGGAACAGCAGCTCGCCGCCAT
GCAGAAGCGCATGGCCGCCATGGGTGGTGCTGGCGGTGGTGGATTCCCCG
GTATGCCCGGCATGGGCGACATGGCCAAGATGATGCAAATGCTGCAAGGT
CAAGGAGGTGGCGGCGGTGGTGGTCTTCCCGGCCTGGGTGGGATGGACCT
ACAAAGTATGATGAGCCAGATGAGTGGATTGATGGGCGGTGGCGGTGGTG
GTGGTGGCCGCGGTAGAGGACGGTGAATGGTCCTTCAGGATCTCGGGCGG
CGAATCAACGCCGCCGTCAATGACCTGACTCGCTCTAACAATTTGGACGA
GAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0048500signal recognition particle
Vocabulary: Biological Process
TermDefinition
GO:0006614SRP-dependent cotranslational protein targeting to membrane
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:00083127S RNA binding
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_287874M747DRAFT_287874Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_287874-T1M747DRAFT_287874-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_287874-T1.cdsM747DRAFT_287874-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_287874-T1.utr3p1M747DRAFT_287874-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_287874-T1.exon2M747DRAFT_287874-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_287874-T1.exon1M747DRAFT_287874-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_287874-T1.utr5p1M747DRAFT_287874-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09261V9P
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR036225
DBxrefInterPro:IPR022941
DBxrefInterPro:IPR036891
DBxrefInterPro:IPR042101
DBxrefInterPro:IPR004125
DBxrefInterPro:IPR006325
DBxrefInterPro:IPR003593
DBxrefInterPro:IPR013822
DBxrefInterPro:IPR000897
DBxrefPFAM:PF02978
DBxrefPFAM:PF02881
DBxrefPFAM:PF00448
DBxrefPFAM:PF02492
Productsignal recognition particle protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851945.1supercontigKZ851945.1:11402..13487 -
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