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M747DRAFT_288106-T1, M747DRAFT_288106-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_288106-T1
Unique NameM747DRAFT_288106-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851946.1:43003..44888-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_288106-T1 ID=M747DRAFT_288106-T1|Name=M747DRAFT_288106-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1886bp|location=Sequence derived from alignment at KZ851946.1:43003..44888- (Aspergillus niger ATCC 13496)
CGAAATTCAGCCAGTCTCCTGCTACTCAACCGGGTTTGTGGACGACCGAC
AATTGAAATTTAATTTCCCGACACCCTACACGTCCCACCGGTTCATCATG
TCGAAGAGATCTGCCGACGTTTCCGACGAGCAGAACGCCGCCCTCAAGGC
CGGTGAGCGTCCCGTCGTCGACGCCCCTCCCGACGAGGTGGGGGAGTTCG
AGGATGAGTATGAGGATGAGTTCGAGAGTGAGGACGAGGTTCTCGAGGCT
GGTGTAGATGGTCGTCCCGATGCTGAACGGGAGGAGGAAGAGAAAGGTAA
GATCTTGCGCCCATTGCGACGGGTTCTGCCAGTCGCATACTGCGATCCTC
GAATGTGGCAGTCATACTGACCCCGACTGGTCCCTTCAGATGCCATGGAC
CTTGACAAGCAGACTTTTATTCCCGGAAGGACAAAATTGGCACCCGGAGA
GGTCCTCTCTCCCGATCCGTCTACTTACGACATGCTGCACACTCTCAGCA
CCCCGTGGCCCTGTCTATCGTTCGATATCGTGCGCGATTCGTTGGGCGAC
AACCGCAAGACTTATCCCGCCACTGTCTACGCCGTAACAGGCACACAAGC
AGAGGGCCGACGTGCAAAGGAGAATGAGCTGATGGTGTTGAAGCTAAGTG
GTATGAGCAAGATGGACAAGGAGGATGGCATGGATTCGGACAGCGACTCC
GATTCGGACGACGACAGCGAGGCGATCCTGGAACACAAGAGCATTCCTCT
CGGATCGACGACCAACCGCATCCGCGCCCACCAGACCCCTAACCAGTCCG
GAGACTATTCCAAGCCCCCGCAGACTCTTACCGCCACTATGCTCGAGAAC
TCCCAGGTCGTGATCCACGATGTTACCCCCCATCTCACCAGCTTCGATGT
CCCTGGAACCATCCTCCCTCCCTCCGCCAACAAGCCCCTGTCTACCCTCC
GCATGCACAAGTCGGAGGGATACGCCCTCGACTGGTCTCCGCTACAGCCC
CTCGGCAAGCTGTTGACTGGTGACAATGACGGTTTGATCTACGTGACGAC
TCGCACTGAAGGCGGTGGCTGGGTCACCGACACTCGTCCGTTCACCGGCC
ACATGTCGTCTGTTGAGGAGCTCCAGTGGTCTCCCAACGAGAAGAACGTT
TTCGCCTCTGCCAGCAGTGACGGCAGTGTCAAGGTGTGGGACGTTCGTTC
GAAGTCGCGCAAGCCTGCTGTCGACGTGAAGGTGTCGAACACCGATGTCA
ACGTCATGAGCTGGTCGAACCAGACTTTCCACCTCCTTGCGACAGGTGCG
GATGACGGACAGTGGGCCGTCTGGGATCTGAGACACTGGAAGCCGAATGC
CGCGGCTCCGGGATCTCAGACCACAGCTTCCCCTGTTGCCTCGTTCGACT
TCCACCGTGAGCCTGTCACGAGTATTGAGTGGCACCCGACCGACGACAGT
GTCGTCGCGGTCGGTTCCGCCGACAACACGGTCACGCTGTGGGATTTGGC
TGTGGAACTGGATGAGGAGGAGAACCGTGAGGCGGGAATGCAGGAAGTTC
CGCCGCAGCTACTGTTCGTGCACTACATGGAGTCCGTCAAGGAAATCCAC
TGGCAGGCCCAGATGCCCGGTACGATCATGGCTACGGGCGGTGTTGGATT
TGGGTAAGTCATACTCCACTCTGTTTTTTTCTTTTTATTTTAAGGGACAC
TAAAGCTAACAAATCGAAACAGTGTGTTCAAGACAATCAGTGTGTAGACA
AAGTTCAACAAAAGTGCCATTTAAACGAATGCATATAGGTAGTTTGGTGC
GTTTTGATGCGTTATACCACATGATCGGTTATGTTATTGCTTTATGATGA
ATTATATAGATTACAATGATGAAGCATGATGCCCAT
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Coding sequence (CDS) from alignment at KZ851946.1:43003..44888-

>M747DRAFT_288106-T1 ID=M747DRAFT_288106-T1|Name=M747DRAFT_288106-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4464bp|location=Sequence derived from alignment at KZ851946.1:43003..44888- (Aspergillus niger ATCC 13496)
TGTGTTCAAGACAATCAGTGTGTAGATGCCATGGACCTTGACAAGCAGAC
TTTTATTCCCGGAAGGACAAAATTGGCACCCGGAGAGGTCCTCTCTCCCG
ATCCGTCTACTTACGACATGCTGCACACTCTCAGCACCCCGTGGCCCTGT
CTATCGTTCGATATCGTGCGCGATTCGTTGGGCGACAACCGCAAGACTTA
TCCCGCCACTGTCTACGCCGTAACAGGCACACAAGCAGAGGGCCGACGTG
CAAAGGAGAATGAGCTGATGGTGTTGAAGCTAAGTGGTATGAGCAAGATG
GACAAGGAGGATGGCATGGATTCGGACAGCGACTCCGATTCGGACGACGA
CAGCGAGGCGATCCTGGAACACAAGAGCATTCCTCTCGGATCGACGACCA
ACCGCATCCGCGCCCACCAGACCCCTAACCAGTCCGGAGACTATTCCAAG
CCCCCGCAGACTCTTACCGCCACTATGCTCGAGAACTCCCAGGTCGTGAT
CCACGATGTTACCCCCCATCTCACCAGCTTCGATGTCCCTGGAACCATCC
TCCCTCCCTCCGCCAACAAGCCCCTGTCTACCCTCCGCATGCACAAGTCG
GAGGGATACGCCCTCGACTGGTCTCCGCTACAGCCCCTCGGCAAGCTGTT
GACTGGTGACAATGACGGTTTGATCTACGTGACGACTCGCACTGAAGGCG
GTGGCTGGGTCACCGACACTCGTCCGTTCACCGGCCACATGTCGTCTGTT
GAGGAGCTCCAGTGGTCTCCCAACGAGAAGAACGTTTTCGCCTCTGCCAG
CAGTGACGGCAGTGTCAAGGTGTGGGACGTTCGTTCGAAGTCGCGCAAGC
CTGCTGTCGACGTGAAGGTGTCGAACACCGATGTCAACGTCATGAGCTGG
TCGAACCAGACTTTCCACCTCCTTGCGACAGGTGCGGATGACGGACAGTG
GGCCGTCTGGGATCTGAGACACTGGAAGCCGAATGCCGCGGCTCCGGGAT
CTCAGACCACAGCTTCCCCTGTTGCCTCGTTCGACTTCCACCGTGAGCCT
GTCACGAGTATTGAGTGGCACCCGACCGACGACAGTGTCGTCGCGGTCGG
TTCCGCCGACAACACGGTCACGCTGTGGGATTTGGCTGTGGAACTGGATG
AGGAGGAGAACCGTGAGGCGGGAATGCAGGAAGTTCCGCCGCAGCTACTG
TTCGTGCACTACATGGAGTCCGTCAAGGAAATCCACTGGCAGGCCCAGAT
GCCCGGTACGATCATGGCTACGGGCGGTGTTGGATTTGGATGTCGAAGAG
ATCTGCCGACGTTTCCGACGAGCAGAACGCCGCCCTCAAGGCCGGTGAGC
GTCCCGTCGTCGACGCCCCTCCCGACGAGGTGGGGGAGTTCGAGGATGAG
TATGAGGATGAGTTCGAGAGTGAGGACGAGGTTCTCGAGGCTGGTGTAGA
TGGTCGTCCCGATGCTGAACGGGAGGAGGAAGAGAAAGTGTGTTCAAGAC
AATCAGTGTGTAGATGCCATGGACCTTGACAAGCAGACTTTTATTCCCGG
AAGGACAAAATTGGCACCCGGAGAGGTCCTCTCTCCCGATCCGTCTACTT
ACGACATGCTGCACACTCTCAGCACCCCGTGGCCCTGTCTATCGTTCGAT
ATCGTGCGCGATTCGTTGGGCGACAACCGCAAGACTTATCCCGCCACTGT
CTACGCCGTAACAGGCACACAAGCAGAGGGCCGACGTGCAAAGGAGAATG
AGCTGATGGTGTTGAAGCTAAGTGGTATGAGCAAGATGGACAAGGAGGAT
GGCATGGATTCGGACAGCGACTCCGATTCGGACGACGACAGCGAGGCGAT
CCTGGAACACAAGAGCATTCCTCTCGGATCGACGACCAACCGCATCCGCG
CCCACCAGACCCCTAACCAGTCCGGAGACTATTCCAAGCCCCCGCAGACT
CTTACCGCCACTATGCTCGAGAACTCCCAGGTCGTGATCCACGATGTTAC
CCCCCATCTCACCAGCTTCGATGTCCCTGGAACCATCCTCCCTCCCTCCG
CCAACAAGCCCCTGTCTACCCTCCGCATGCACAAGTCGGAGGGATACGCC
CTCGACTGGTCTCCGCTACAGCCCCTCGGCAAGCTGTTGACTGGTGACAA
TGACGGTTTGATCTACGTGACGACTCGCACTGAAGGCGGTGGCTGGGTCA
CCGACACTCGTCCGTTCACCGGCCACATGTCGTCTGTTGAGGAGCTCCAG
TGGTCTCCCAACGAGAAGAACGTTTTCGCCTCTGCCAGCAGTGACGGCAG
TGTCAAGGTGTGGGACGTTCGTTCGAAGTCGCGCAAGCCTGCTGTCGACG
TGAAGGTGTCGAACACCGATGTCAACGTCATGAGCTGGTCGAACCAGACT
TTCCACCTCCTTGCGACAGGTGCGGATGACGGACAGTGGGCCGTCTGGGA
TCTGAGACACTGGAAGCCGAATGCCGCGGCTCCGGGATCTCAGACCACAG
CTTCCCCTGTTGCCTCGTTCGACTTCCACCGTGAGCCTGTCACGAGTATT
GAGTGGCACCCGACCGACGACAGTGTCGTCGCGGTCGGTTCCGCCGACAA
CACGGTCACGCTGTGGGATTTGGCTGTGGAACTGGATGAGGAGGAGAACC
GTGAGGCGGGAATGCAGGAAGTTCCGCCGCAGCTACTGTTCGTGCACTAC
ATGGAGTCCGTCAAGGAAATCCACTGGCAGGCCCAGATGCCCGGTACGAT
CATGGCTACGGGCGGTGTTGGATTTGGATGTCGAAGAGATCTGCCGACGT
TTCCGACGAGCAGAACGCCGCCCTCAAGGCCGGTGAGCGTCCCGTCGTCG
ACGCCCCTCCCGACGAGGTGGGGGAGTTCGAGGATGAGTATGAGGATGAG
TTCGAGAGTGAGGACGAGGTTCTCGAGGCTGGTGTAGATGGTCGTCCCGA
TGCTGAACGGGAGGAGGAAGAGAAAGTGTGTTCAAGACAATCAGTGTGTA
GATGCCATGGACCTTGACAAGCAGACTTTTATTCCCGGAAGGACAAAATT
GGCACCCGGAGAGGTCCTCTCTCCCGATCCGTCTACTTACGACATGCTGC
ACACTCTCAGCACCCCGTGGCCCTGTCTATCGTTCGATATCGTGCGCGAT
TCGTTGGGCGACAACCGCAAGACTTATCCCGCCACTGTCTACGCCGTAAC
AGGCACACAAGCAGAGGGCCGACGTGCAAAGGAGAATGAGCTGATGGTGT
TGAAGCTAAGTGGTATGAGCAAGATGGACAAGGAGGATGGCATGGATTCG
GACAGCGACTCCGATTCGGACGACGACAGCGAGGCGATCCTGGAACACAA
GAGCATTCCTCTCGGATCGACGACCAACCGCATCCGCGCCCACCAGACCC
CTAACCAGTCCGGAGACTATTCCAAGCCCCCGCAGACTCTTACCGCCACT
ATGCTCGAGAACTCCCAGGTCGTGATCCACGATGTTACCCCCCATCTCAC
CAGCTTCGATGTCCCTGGAACCATCCTCCCTCCCTCCGCCAACAAGCCCC
TGTCTACCCTCCGCATGCACAAGTCGGAGGGATACGCCCTCGACTGGTCT
CCGCTACAGCCCCTCGGCAAGCTGTTGACTGGTGACAATGACGGTTTGAT
CTACGTGACGACTCGCACTGAAGGCGGTGGCTGGGTCACCGACACTCGTC
CGTTCACCGGCCACATGTCGTCTGTTGAGGAGCTCCAGTGGTCTCCCAAC
GAGAAGAACGTTTTCGCCTCTGCCAGCAGTGACGGCAGTGTCAAGGTGTG
GGACGTTCGTTCGAAGTCGCGCAAGCCTGCTGTCGACGTGAAGGTGTCGA
ACACCGATGTCAACGTCATGAGCTGGTCGAACCAGACTTTCCACCTCCTT
GCGACAGGTGCGGATGACGGACAGTGGGCCGTCTGGGATCTGAGACACTG
GAAGCCGAATGCCGCGGCTCCGGGATCTCAGACCACAGCTTCCCCTGTTG
CCTCGTTCGACTTCCACCGTGAGCCTGTCACGAGTATTGAGTGGCACCCG
ACCGACGACAGTGTCGTCGCGGTCGGTTCCGCCGACAACACGGTCACGCT
GTGGGATTTGGCTGTGGAACTGGATGAGGAGGAGAACCGTGAGGCGGGAA
TGCAGGAAGTTCCGCCGCAGCTACTGTTCGTGCACTACATGGAGTCCGTC
AAGGAAATCCACTGGCAGGCCCAGATGCCCGGTACGATCATGGCTACGGG
CGGTGTTGGATTTGGATGTCGAAGAGATCTGCCGACGTTTCCGACGAGCA
GAACGCCGCCCTCAAGGCCGGTGAGCGTCCCGTCGTCGACGCCCCTCCCG
ACGAGGTGGGGGAGTTCGAGGATGAGTATGAGGATGAGTTCGAGAGTGAG
GACGAGGTTCTCGAGGCTGGTGTAGATGGTCGTCCCGATGCTGAACGGGA
GGAGGAAGAGAAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_288106M747DRAFT_288106Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_288106-T1M747DRAFT_288106-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_288106-T1.cdsM747DRAFT_288106-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_288106-T1.utr3p1M747DRAFT_288106-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_288106-T1.exon3M747DRAFT_288106-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_288106-T1.exon2M747DRAFT_288106-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_288106-T1.exon1M747DRAFT_288106-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_288106-T1.utr5p1M747DRAFT_288106-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09262DC1
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR022052
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
DBxrefPFAM:PF12265
ProductWD40 repeat-like protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851946.1supercontigKZ851946.1:43003..44888 -
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