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M747DRAFT_288349-T1, M747DRAFT_288349-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_288349-T1
Unique NameM747DRAFT_288349-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851947.1:119487..121577-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_288349-T1 ID=M747DRAFT_288349-T1|Name=M747DRAFT_288349-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2091bp|location=Sequence derived from alignment at KZ851947.1:119487..121577- (Aspergillus niger ATCC 13496)
GCAATTCTACCCTCCCAGGCTTTTCTTCAACTCCACGTCGGTCCACGGCA
GGTCTACGGTCGCATAACCCCGGGAAATTGAGACGCGACCTCGATAAGTC
GCACGTAAAGGACCGTTTTGTCTAATTTTTAGGGCCCTTCCCTCAATTTC
GCAATGGCCGACTACCTTCTGTTCGAGGGCCCCATGGGCTACTCGCTTTT
CAAGGTCGCCCACCAGGGTGACAGCGTTGGAAACCGCTTGAAGGAGGTTC
AAGAAGGTGTTAACGACTTGGCCAGTTTTGGTAAAATGGTCGAACTGTCC
AGTTTCCTGCCTTTCGAGTATGTGGTTCAATTTTTCCCATAGGATCACTT
TCCCGCAGGAATCTGACAACTTCCAGGAACAACAAGCAGGCTCTCAGTGA
AATCAACGATGTCTCCGAGGGTGTCGCTTCGGACACTCTGATCTCTTTCC
TCGAATTGAACTTGCCCAAGCCTAACAAGAAGAAGAAGGTTGTTCTGGGT
CTTGCCGACAAGGCCTTGGCTGGAAGTATCAAGTCTGCCTTCTCTTTCGT
TGACTGCGAGACTGGAGACACCAGCGAAGTCGTCCAGGATATGCTTCGTG
GAGTTAGACTGCACGCCACCAAGCTGCTGAAGCAGCTGCGTGAGGGTGAT
ATGGACACCGCTCAGCTTGGTCTTGGTCACGCTTACTCTCGCGCCAAGGT
TAAGTTTTCCGTTCAGCGCGATGACAACCACATCATCCAGGCCATTGCTA
TCCTCGACCAGCTCGACAAGGCCATCAACACTTTCTCCATGAGAGTCAGG
GAATGGTACTCCTGGCACTTCCCCGAACTCTACAAGATTGTCTCCGACAA
CCAACGCTACGCGCAGATTGCCTTGTTCGTCCAGGACAAGAAGAGCTTGA
ACGACGAGAAGTTGCACGACATTGCTGCCCTTGTGGAGGATGATGAGGGT
GTCGCCCAGAGTATCATCGACGCTGCTAAGCACAGCATGGGTCAGGAGAT
CTCCGAGACCGACATGGAGAACGTTATCTCTTTCGCCCAGCGCGTTGTCA
GCCTGTCCAAGTACCGCAAGTCTCTCCACCAGTACCTGATTTCCAAGATG
AGCGTTGTCGCCCCCAACCTTGCTGCCCTTATTGGTGAGATCGTTGGTGC
TCGCTTGATCTCCCACGCTGGTAGCTTGACCAACCTGTCCAAGTACCCCG
CTTCGACGGTTCAGATTCTCGGTGCTGAGAAGGCCCTCTTCAGAGCCTTG
AAGACCAAGGGCAACACCCCCAAGTACGGTCTTCTGTACCACTCCTCTTT
CATTGGAAGAGCTGGTCCCAAGAACAAGGGTCGCATCTCTCGCTTCCTTG
CCAACAAGTGCTCCATCGCCTCCAGAATTGACAACTTCTCCGAGGAGCCC
TCCACCAAGTTCGGAGAGGCCCTTAAGAAGCAGGTTGAGGAGCGTCTGGA
CTTCTACGCCACTGGTGCTGCCCCTACCAAGAACGAAGTCGCCATGGTAA
GTCAACATAGCTAGTGTGATCGCTAGGACACTAGTGAACCACAAACCCCT
TTTCTCCGTAACAATCACTGATGGTCCTTACAGAAAAACGCCATGGATGC
TGTCCTTGCTGATATGGACATTGACGGCGCTGAGAGCGATGCCGAGATGC
AGGATGCTGATGAGAAGGCCGAGAAGAAGGACAAGAAGGAGAAGAAGGAA
AAGAAGGACAAGAAGGAAAAGAAGGAGAAGAAGGAAAAGGGCGAGAAGGA
GGAGAAGAAGAAGAAGCGCAAGTCCGACGTTGGCGAGGGCGAGTCCGAGA
AGAAGAAGCGGAAGCACGACAGCGATGCTGAGCCGTCCAAAAAGAAGAAG
AAGGTTTAAAAGTACCGAATCTTGGGACAGGAGGGCGTCATTGTCGCGGC
GTTGATGGGTTTTCTTTATTATTCTTGCCAACCATGTTCTGTTTTCTCCT
TGACGACTTGATGGGCTGGGTATTTTGTAAATTATTCGATTGAGGCCTGT
GTCGTGCTAAAATTTGTGTGTAGTTCTTGCTGCCAATTTGATATGGCTTT
TTGGTTCTAGACTTATATGACATGGCAATTGGCTGTATGCG
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Coding sequence (CDS) from alignment at KZ851947.1:119487..121577-

>M747DRAFT_288349-T1 ID=M747DRAFT_288349-T1|Name=M747DRAFT_288349-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4680bp|location=Sequence derived from alignment at KZ851947.1:119487..121577- (Aspergillus niger ATCC 13496)
AAAAACGCCATGGATGCTGTCCTTGCTGATATGGACATTGACGGCGCTGA
GAGCGATGCCGAGATGCAGGATGCTGATGAGAAGGCCGAGAAGAAGGACA
AGAAGGAGAAGAAGGAAAAGAAGGACAAGAAGGAAAAGAAGGAGAAGAAG
GAAAAGGGCGAGAAGGAGGAGAAGAAGAAGAAGCGCAAGTCCGACGTTGG
CGAGGGCGAGTCCGAGAAGAAGAAGCGGAAGCACGACAGCGATGCTGAGC
CGTCCAAAAAGAAGAAGAAGGTTTAAGAACAACAAGCAGGCTCTCAGTGA
AATCAACGATGTCTCCGAGGGTGTCGCTTCGGACACTCTGATCTCTTTCC
TCGAATTGAACTTGCCCAAGCCTAACAAGAAGAAGAAGGTTGTTCTGGGT
CTTGCCGACAAGGCCTTGGCTGGAAGTATCAAGTCTGCCTTCTCTTTCGT
TGACTGCGAGACTGGAGACACCAGCGAAGTCGTCCAGGATATGCTTCGTG
GAGTTAGACTGCACGCCACCAAGCTGCTGAAGCAGCTGCGTGAGGGTGAT
ATGGACACCGCTCAGCTTGGTCTTGGTCACGCTTACTCTCGCGCCAAGGT
TAAGTTTTCCGTTCAGCGCGATGACAACCACATCATCCAGGCCATTGCTA
TCCTCGACCAGCTCGACAAGGCCATCAACACTTTCTCCATGAGAGTCAGG
GAATGGTACTCCTGGCACTTCCCCGAACTCTACAAGATTGTCTCCGACAA
CCAACGCTACGCGCAGATTGCCTTGTTCGTCCAGGACAAGAAGAGCTTGA
ACGACGAGAAGTTGCACGACATTGCTGCCCTTGTGGAGGATGATGAGGGT
GTCGCCCAGAGTATCATCGACGCTGCTAAGCACAGCATGGGTCAGGAGAT
CTCCGAGACCGACATGGAGAACGTTATCTCTTTCGCCCAGCGCGTTGTCA
GCCTGTCCAAGTACCGCAAGTCTCTCCACCAGTACCTGATTTCCAAGATG
AGCGTTGTCGCCCCCAACCTTGCTGCCCTTATTGGTGAGATCGTTGGTGC
TCGCTTGATCTCCCACGCTGGTAGCTTGACCAACCTGTCCAAGTACCCCG
CTTCGACGGTTCAGATTCTCGGTGCTGAGAAGGCCCTCTTCAGAGCCTTG
AAGACCAAGGGCAACACCCCCAAGTACGGTCTTCTGTACCACTCCTCTTT
CATTGGAAGAGCTGGTCCCAAGAACAAGGGTCGCATCTCTCGCTTCCTTG
CCAACAAGTGCTCCATCGCCTCCAGAATTGACAACTTCTCCGAGGAGCCC
TCCACCAAGTTCGGAGAGGCCCTTAAGAAGCAGGTTGAGGAGCGTCTGGA
CTTCTACGCCACTGGTGCTGCCCCTACCAAGAACGAAGTCGCCATGATGG
CCGACTACCTTCTGTTCGAGGGCCCCATGGGCTACTCGCTTTTCAAGGTC
GCCCACCAGGGTGACAGCGTTGGAAACCGCTTGAAGGAGGTTCAAGAAGG
TGTTAACGACTTGGCCAGTTTTGGTAAAATGGTCGAACTGTCCAGTTTCC
TGCCTTTCGAAAAAACGCCATGGATGCTGTCCTTGCTGATATGGACATTG
ACGGCGCTGAGAGCGATGCCGAGATGCAGGATGCTGATGAGAAGGCCGAG
AAGAAGGACAAGAAGGAGAAGAAGGAAAAGAAGGACAAGAAGGAAAAGAA
GGAGAAGAAGGAAAAGGGCGAGAAGGAGGAGAAGAAGAAGAAGCGCAAGT
CCGACGTTGGCGAGGGCGAGTCCGAGAAGAAGAAGCGGAAGCACGACAGC
GATGCTGAGCCGTCCAAAAAGAAGAAGAAGGTTTAAGAACAACAAGCAGG
CTCTCAGTGAAATCAACGATGTCTCCGAGGGTGTCGCTTCGGACACTCTG
ATCTCTTTCCTCGAATTGAACTTGCCCAAGCCTAACAAGAAGAAGAAGGT
TGTTCTGGGTCTTGCCGACAAGGCCTTGGCTGGAAGTATCAAGTCTGCCT
TCTCTTTCGTTGACTGCGAGACTGGAGACACCAGCGAAGTCGTCCAGGAT
ATGCTTCGTGGAGTTAGACTGCACGCCACCAAGCTGCTGAAGCAGCTGCG
TGAGGGTGATATGGACACCGCTCAGCTTGGTCTTGGTCACGCTTACTCTC
GCGCCAAGGTTAAGTTTTCCGTTCAGCGCGATGACAACCACATCATCCAG
GCCATTGCTATCCTCGACCAGCTCGACAAGGCCATCAACACTTTCTCCAT
GAGAGTCAGGGAATGGTACTCCTGGCACTTCCCCGAACTCTACAAGATTG
TCTCCGACAACCAACGCTACGCGCAGATTGCCTTGTTCGTCCAGGACAAG
AAGAGCTTGAACGACGAGAAGTTGCACGACATTGCTGCCCTTGTGGAGGA
TGATGAGGGTGTCGCCCAGAGTATCATCGACGCTGCTAAGCACAGCATGG
GTCAGGAGATCTCCGAGACCGACATGGAGAACGTTATCTCTTTCGCCCAG
CGCGTTGTCAGCCTGTCCAAGTACCGCAAGTCTCTCCACCAGTACCTGAT
TTCCAAGATGAGCGTTGTCGCCCCCAACCTTGCTGCCCTTATTGGTGAGA
TCGTTGGTGCTCGCTTGATCTCCCACGCTGGTAGCTTGACCAACCTGTCC
AAGTACCCCGCTTCGACGGTTCAGATTCTCGGTGCTGAGAAGGCCCTCTT
CAGAGCCTTGAAGACCAAGGGCAACACCCCCAAGTACGGTCTTCTGTACC
ACTCCTCTTTCATTGGAAGAGCTGGTCCCAAGAACAAGGGTCGCATCTCT
CGCTTCCTTGCCAACAAGTGCTCCATCGCCTCCAGAATTGACAACTTCTC
CGAGGAGCCCTCCACCAAGTTCGGAGAGGCCCTTAAGAAGCAGGTTGAGG
AGCGTCTGGACTTCTACGCCACTGGTGCTGCCCCTACCAAGAACGAAGTC
GCCATGATGGCCGACTACCTTCTGTTCGAGGGCCCCATGGGCTACTCGCT
TTTCAAGGTCGCCCACCAGGGTGACAGCGTTGGAAACCGCTTGAAGGAGG
TTCAAGAAGGTGTTAACGACTTGGCCAGTTTTGGTAAAATGGTCGAACTG
TCCAGTTTCCTGCCTTTCGAAAAAACGCCATGGATGCTGTCCTTGCTGAT
ATGGACATTGACGGCGCTGAGAGCGATGCCGAGATGCAGGATGCTGATGA
GAAGGCCGAGAAGAAGGACAAGAAGGAGAAGAAGGAAAAGAAGGACAAGA
AGGAAAAGAAGGAGAAGAAGGAAAAGGGCGAGAAGGAGGAGAAGAAGAAG
AAGCGCAAGTCCGACGTTGGCGAGGGCGAGTCCGAGAAGAAGAAGCGGAA
GCACGACAGCGATGCTGAGCCGTCCAAAAAGAAGAAGAAGGTTTAAGAAC
AACAAGCAGGCTCTCAGTGAAATCAACGATGTCTCCGAGGGTGTCGCTTC
GGACACTCTGATCTCTTTCCTCGAATTGAACTTGCCCAAGCCTAACAAGA
AGAAGAAGGTTGTTCTGGGTCTTGCCGACAAGGCCTTGGCTGGAAGTATC
AAGTCTGCCTTCTCTTTCGTTGACTGCGAGACTGGAGACACCAGCGAAGT
CGTCCAGGATATGCTTCGTGGAGTTAGACTGCACGCCACCAAGCTGCTGA
AGCAGCTGCGTGAGGGTGATATGGACACCGCTCAGCTTGGTCTTGGTCAC
GCTTACTCTCGCGCCAAGGTTAAGTTTTCCGTTCAGCGCGATGACAACCA
CATCATCCAGGCCATTGCTATCCTCGACCAGCTCGACAAGGCCATCAACA
CTTTCTCCATGAGAGTCAGGGAATGGTACTCCTGGCACTTCCCCGAACTC
TACAAGATTGTCTCCGACAACCAACGCTACGCGCAGATTGCCTTGTTCGT
CCAGGACAAGAAGAGCTTGAACGACGAGAAGTTGCACGACATTGCTGCCC
TTGTGGAGGATGATGAGGGTGTCGCCCAGAGTATCATCGACGCTGCTAAG
CACAGCATGGGTCAGGAGATCTCCGAGACCGACATGGAGAACGTTATCTC
TTTCGCCCAGCGCGTTGTCAGCCTGTCCAAGTACCGCAAGTCTCTCCACC
AGTACCTGATTTCCAAGATGAGCGTTGTCGCCCCCAACCTTGCTGCCCTT
ATTGGTGAGATCGTTGGTGCTCGCTTGATCTCCCACGCTGGTAGCTTGAC
CAACCTGTCCAAGTACCCCGCTTCGACGGTTCAGATTCTCGGTGCTGAGA
AGGCCCTCTTCAGAGCCTTGAAGACCAAGGGCAACACCCCCAAGTACGGT
CTTCTGTACCACTCCTCTTTCATTGGAAGAGCTGGTCCCAAGAACAAGGG
TCGCATCTCTCGCTTCCTTGCCAACAAGTGCTCCATCGCCTCCAGAATTG
ACAACTTCTCCGAGGAGCCCTCCACCAAGTTCGGAGAGGCCCTTAAGAAG
CAGGTTGAGGAGCGTCTGGACTTCTACGCCACTGGTGCTGCCCCTACCAA
GAACGAAGTCGCCATGATGGCCGACTACCTTCTGTTCGAGGGCCCCATGG
GCTACTCGCTTTTCAAGGTCGCCCACCAGGGTGACAGCGTTGGAAACCGC
TTGAAGGAGGTTCAAGAAGGTGTTAACGACTTGGCCAGTTTTGGTAAAAT
GGTCGAACTGTCCAGTTTCCTGCCTTTCGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NOP56M747DRAFT_288349Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_288349-T1M747DRAFT_288349-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_288349-T1.cdsM747DRAFT_288349-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_288349-T1.utr3p1M747DRAFT_288349-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_288349-T1.exon3M747DRAFT_288349-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_288349-T1.exon2M747DRAFT_288349-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_288349-T1.exon1M747DRAFT_288349-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_288349-T1.utr5p1M747DRAFT_288349-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036070
DBxrefInterPro:IPR042239
DBxrefInterPro:IPR029012
DBxrefInterPro:IPR012974
DBxrefInterPro:IPR002687
DBxrefInterPro:IPR012976
DBxrefPFAM:PF08156
DBxrefPFAM:PF01798
ProductsnoRNP complex protein nop56
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851947.1supercontigKZ851947.1:119487..121577 -
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