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M747DRAFT_289698-T1, M747DRAFT_289698-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_289698-T1
Unique NameM747DRAFT_289698-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851957.1:90089..91245-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_289698-T1 ID=M747DRAFT_289698-T1|Name=M747DRAFT_289698-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1157bp|location=Sequence derived from alignment at KZ851957.1:90089..91245- (Aspergillus niger ATCC 13496)
GTTACGCTCTGACCATTCGTGCTCTCCCCACCCTCCATTCTCCCTCTAAC
ATCATCCCATCATGGCGGCGGAACAAAGAAAGCTGCTTGAGCAGCTCATG
GGAGGTAAATTGTCCAACCCCAGCTTCTACCAAGCTCTAAACAGCTAACC
CAATTCTTTTTCTCCAGCGGACCAGCTCATAGGTACCGGCGCTCCCTCTC
GCAATGCGCAGCTCCAAATCACCGATCCAAAAGTCTGTCGCTCGTATCTC
GTCGGCACTTGTCCGCATGACCTCTTCACCAATACCAAGCAAGACCTGGG
CCCTTGTCAGAAAGTTCACAGCGAAGGATTGAAGACGGAGTATGAGACCG
CCTCGGCAGCTGAGAAGGCCAAATGGGGATTCGATTACGACTATATGCGC
GACATGCAGAAATACATCGATGATTGTGACCGACGTATCGATACCGCTCA
GCGACGCTTGGAAAAGACTCCGGACGAGATCAGGCAGACCAACAACTTGG
TAAGGCATATACTCCAGCCCAACCACAGGACACCCCAAGTGGCCAAAAGA
AGACTGGACTGATCATATTCTCAATAATATAGCTGAAGCAAATCTCCGAC
CTGACCAAAACCATCAACACGGGTCTCCTCGAGATCTCGGTGCTAGGCGA
AACCGGCTCCGTCGCACAGGCCCTGAACGAACTCCACAAGATCCGCACAG
CCAAGCATCAAAAGGAAACGTGTGAGCGAGAATTGAAGAACCTTCAAGAT
ACCTCCGGACCTTCAGGTCATCAGAAGCTGCAAGTGTGCGATGTCTGCGG
CGCGTACCTGAGTCGTCTCGATAACGATCGTCGGTTGGCGGACCATTTCT
TCGGAAAGATGCACATGGGATACTCGGACATGCGCAAGGGGTATAAGAAG
CTCAGCGAGGAGCTTAAGGGACGGCCTCCGCCGGTTCGTCACCACGATGA
CGATGATGGTGGTTGGGGTGGACGCTCCGGTGGTGGACGTGGTCCTCGGT
ATGGCGGTGGTGGTTACAAGAAGCGCGGTCCTCGCTGGTAAAACATTGGT
GAGCGTCTTGTCTTTTCTTGGAGTTTATTCTGCAATGCTGTCGTAATTTG
TCTGGATTTGCATAGCGCAGGCGTTTTCGTTACTACTACGTCTGGGATGT
TACGGAT
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Coding sequence (CDS) from alignment at KZ851957.1:90089..91245-

>M747DRAFT_289698-T1 ID=M747DRAFT_289698-T1|Name=M747DRAFT_289698-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2502bp|location=Sequence derived from alignment at KZ851957.1:90089..91245- (Aspergillus niger ATCC 13496)
CTGAAGCAAATCTCCGACCTGACCAAAACCATCAACACGGGTCTCCTCGA
GATCTCGGTGCTAGGCGAAACCGGCTCCGTCGCACAGGCCCTGAACGAAC
TCCACAAGATCCGCACAGCCAAGCATCAAAAGGAAACGTGTGAGCGAGAA
TTGAAGAACCTTCAAGATACCTCCGGACCTTCAGGTCATCAGAAGCTGCA
AGTGTGCGATGTCTGCGGCGCGTACCTGAGTCGTCTCGATAACGATCGTC
GGTTGGCGGACCATTTCTTCGGAAAGATGCACATGGGATACTCGGACATG
CGCAAGGGGTATAAGAAGCTCAGCGAGGAGCTTAAGGGACGGCCTCCGCC
GGTTCGTCACCACGATGACGATGATGGTGGTTGGGGTGGACGCTCCGGTG
GTGGACGTGGTCCTCGGTATGGCGGTGGTGGTTACAAGAAGCGCGGTCCT
CGCTGGTAACGGACCAGCTCATAGGTACCGGCGCTCCCTCTCGCAATGCG
CAGCTCCAAATCACCGATCCAAAAGTCTGTCGCTCGTATCTCGTCGGCAC
TTGTCCGCATGACCTCTTCACCAATACCAAGCAAGACCTGGGCCCTTGTC
AGAAAGTTCACAGCGAAGGATTGAAGACGGAGTATGAGACCGCCTCGGCA
GCTGAGAAGGCCAAATGGGGATTCGATTACGACTATATGCGCGACATGCA
GAAATACATCGATGATTGTGACCGACGTATCGATACCGCTCAGCGACGCT
TGGAAAAGACTCCGGACGAGATCAGGCAGACCAACAACTTGATGGCGGCG
GAACAAAGAAAGCTGCTTGAGCAGCTCATGGGAGCTGAAGCAAATCTCCG
ACCTGACCAAAACCATCAACACGGGTCTCCTCGAGATCTCGGTGCTAGGC
GAAACCGGCTCCGTCGCACAGGCCCTGAACGAACTCCACAAGATCCGCAC
AGCCAAGCATCAAAAGGAAACGTGTGAGCGAGAATTGAAGAACCTTCAAG
ATACCTCCGGACCTTCAGGTCATCAGAAGCTGCAAGTGTGCGATGTCTGC
GGCGCGTACCTGAGTCGTCTCGATAACGATCGTCGGTTGGCGGACCATTT
CTTCGGAAAGATGCACATGGGATACTCGGACATGCGCAAGGGGTATAAGA
AGCTCAGCGAGGAGCTTAAGGGACGGCCTCCGCCGGTTCGTCACCACGAT
GACGATGATGGTGGTTGGGGTGGACGCTCCGGTGGTGGACGTGGTCCTCG
GTATGGCGGTGGTGGTTACAAGAAGCGCGGTCCTCGCTGGTAACGGACCA
GCTCATAGGTACCGGCGCTCCCTCTCGCAATGCGCAGCTCCAAATCACCG
ATCCAAAAGTCTGTCGCTCGTATCTCGTCGGCACTTGTCCGCATGACCTC
TTCACCAATACCAAGCAAGACCTGGGCCCTTGTCAGAAAGTTCACAGCGA
AGGATTGAAGACGGAGTATGAGACCGCCTCGGCAGCTGAGAAGGCCAAAT
GGGGATTCGATTACGACTATATGCGCGACATGCAGAAATACATCGATGAT
TGTGACCGACGTATCGATACCGCTCAGCGACGCTTGGAAAAGACTCCGGA
CGAGATCAGGCAGACCAACAACTTGATGGCGGCGGAACAAAGAAAGCTGC
TTGAGCAGCTCATGGGAGCTGAAGCAAATCTCCGACCTGACCAAAACCAT
CAACACGGGTCTCCTCGAGATCTCGGTGCTAGGCGAAACCGGCTCCGTCG
CACAGGCCCTGAACGAACTCCACAAGATCCGCACAGCCAAGCATCAAAAG
GAAACGTGTGAGCGAGAATTGAAGAACCTTCAAGATACCTCCGGACCTTC
AGGTCATCAGAAGCTGCAAGTGTGCGATGTCTGCGGCGCGTACCTGAGTC
GTCTCGATAACGATCGTCGGTTGGCGGACCATTTCTTCGGAAAGATGCAC
ATGGGATACTCGGACATGCGCAAGGGGTATAAGAAGCTCAGCGAGGAGCT
TAAGGGACGGCCTCCGCCGGTTCGTCACCACGATGACGATGATGGTGGTT
GGGGTGGACGCTCCGGTGGTGGACGTGGTCCTCGGTATGGCGGTGGTGGT
TACAAGAAGCGCGGTCCTCGCTGGTAACGGACCAGCTCATAGGTACCGGC
GCTCCCTCTCGCAATGCGCAGCTCCAAATCACCGATCCAAAAGTCTGTCG
CTCGTATCTCGTCGGCACTTGTCCGCATGACCTCTTCACCAATACCAAGC
AAGACCTGGGCCCTTGTCAGAAAGTTCACAGCGAAGGATTGAAGACGGAG
TATGAGACCGCCTCGGCAGCTGAGAAGGCCAAATGGGGATTCGATTACGA
CTATATGCGCGACATGCAGAAATACATCGATGATTGTGACCGACGTATCG
ATACCGCTCAGCGACGCTTGGAAAAGACTCCGGACGAGATCAGGCAGACC
AACAACTTGATGGCGGCGGAACAAAGAAAGCTGCTTGAGCAGCTCATGGG
AG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005685U1 snRNP
Vocabulary: Molecular Function
TermDefinition
GO:0003729mRNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006376mRNA splice site selection
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_289698M747DRAFT_289698Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_289698-T1M747DRAFT_289698-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_289698-T1.cdsM747DRAFT_289698-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_289698-T1.utr3p1M747DRAFT_289698-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_289698-T1.exon3M747DRAFT_289698-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_289698-T1.exon2M747DRAFT_289698-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_289698-T1.exon1M747DRAFT_289698-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_289698-T1.utr5p1M747DRAFT_289698-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG09264D7Y
DBxrefInterPro:IPR004882
DBxrefPFAM:PF03194
ProductLUC7-domain-containing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851957.1supercontigKZ851957.1:90089..91245 -
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