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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851957.1:90089..91245- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_289698-T1 ID=M747DRAFT_289698-T1|Name=M747DRAFT_289698-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1157bp|location=Sequence derived from alignment at KZ851957.1:90089..91245- (Aspergillus niger ATCC 13496) GTTACGCTCTGACCATTCGTGCTCTCCCCACCCTCCATTCTCCCTCTAAC
ATCATCCCATCATGGCGGCGGAACAAAGAAAGCTGCTTGAGCAGCTCATG
GGAGGTAAATTGTCCAACCCCAGCTTCTACCAAGCTCTAAACAGCTAACC
CAATTCTTTTTCTCCAGCGGACCAGCTCATAGGTACCGGCGCTCCCTCTC
GCAATGCGCAGCTCCAAATCACCGATCCAAAAGTCTGTCGCTCGTATCTC
GTCGGCACTTGTCCGCATGACCTCTTCACCAATACCAAGCAAGACCTGGG
CCCTTGTCAGAAAGTTCACAGCGAAGGATTGAAGACGGAGTATGAGACCG
CCTCGGCAGCTGAGAAGGCCAAATGGGGATTCGATTACGACTATATGCGC
GACATGCAGAAATACATCGATGATTGTGACCGACGTATCGATACCGCTCA
GCGACGCTTGGAAAAGACTCCGGACGAGATCAGGCAGACCAACAACTTGG
TAAGGCATATACTCCAGCCCAACCACAGGACACCCCAAGTGGCCAAAAGA
AGACTGGACTGATCATATTCTCAATAATATAGCTGAAGCAAATCTCCGAC
CTGACCAAAACCATCAACACGGGTCTCCTCGAGATCTCGGTGCTAGGCGA
AACCGGCTCCGTCGCACAGGCCCTGAACGAACTCCACAAGATCCGCACAG
CCAAGCATCAAAAGGAAACGTGTGAGCGAGAATTGAAGAACCTTCAAGAT
ACCTCCGGACCTTCAGGTCATCAGAAGCTGCAAGTGTGCGATGTCTGCGG
CGCGTACCTGAGTCGTCTCGATAACGATCGTCGGTTGGCGGACCATTTCT
TCGGAAAGATGCACATGGGATACTCGGACATGCGCAAGGGGTATAAGAAG
CTCAGCGAGGAGCTTAAGGGACGGCCTCCGCCGGTTCGTCACCACGATGA
CGATGATGGTGGTTGGGGTGGACGCTCCGGTGGTGGACGTGGTCCTCGGT
ATGGCGGTGGTGGTTACAAGAAGCGCGGTCCTCGCTGGTAAAACATTGGT
GAGCGTCTTGTCTTTTCTTGGAGTTTATTCTGCAATGCTGTCGTAATTTG
TCTGGATTTGCATAGCGCAGGCGTTTTCGTTACTACTACGTCTGGGATGT
TACGGAT back to topCoding sequence (CDS) from alignment at KZ851957.1:90089..91245- >M747DRAFT_289698-T1 ID=M747DRAFT_289698-T1|Name=M747DRAFT_289698-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2502bp|location=Sequence derived from alignment at KZ851957.1:90089..91245- (Aspergillus niger ATCC 13496) CTGAAGCAAATCTCCGACCTGACCAAAACCATCAACACGGGTCTCCTCGA GATCTCGGTGCTAGGCGAAACCGGCTCCGTCGCACAGGCCCTGAACGAAC TCCACAAGATCCGCACAGCCAAGCATCAAAAGGAAACGTGTGAGCGAGAA TTGAAGAACCTTCAAGATACCTCCGGACCTTCAGGTCATCAGAAGCTGCA AGTGTGCGATGTCTGCGGCGCGTACCTGAGTCGTCTCGATAACGATCGTC GGTTGGCGGACCATTTCTTCGGAAAGATGCACATGGGATACTCGGACATG CGCAAGGGGTATAAGAAGCTCAGCGAGGAGCTTAAGGGACGGCCTCCGCC GGTTCGTCACCACGATGACGATGATGGTGGTTGGGGTGGACGCTCCGGTG GTGGACGTGGTCCTCGGTATGGCGGTGGTGGTTACAAGAAGCGCGGTCCT CGCTGGTAACGGACCAGCTCATAGGTACCGGCGCTCCCTCTCGCAATGCG CAGCTCCAAATCACCGATCCAAAAGTCTGTCGCTCGTATCTCGTCGGCAC TTGTCCGCATGACCTCTTCACCAATACCAAGCAAGACCTGGGCCCTTGTC AGAAAGTTCACAGCGAAGGATTGAAGACGGAGTATGAGACCGCCTCGGCA GCTGAGAAGGCCAAATGGGGATTCGATTACGACTATATGCGCGACATGCA GAAATACATCGATGATTGTGACCGACGTATCGATACCGCTCAGCGACGCT TGGAAAAGACTCCGGACGAGATCAGGCAGACCAACAACTTGATGGCGGCG GAACAAAGAAAGCTGCTTGAGCAGCTCATGGGAGCTGAAGCAAATCTCCG ACCTGACCAAAACCATCAACACGGGTCTCCTCGAGATCTCGGTGCTAGGC GAAACCGGCTCCGTCGCACAGGCCCTGAACGAACTCCACAAGATCCGCAC AGCCAAGCATCAAAAGGAAACGTGTGAGCGAGAATTGAAGAACCTTCAAG ATACCTCCGGACCTTCAGGTCATCAGAAGCTGCAAGTGTGCGATGTCTGC GGCGCGTACCTGAGTCGTCTCGATAACGATCGTCGGTTGGCGGACCATTT CTTCGGAAAGATGCACATGGGATACTCGGACATGCGCAAGGGGTATAAGA AGCTCAGCGAGGAGCTTAAGGGACGGCCTCCGCCGGTTCGTCACCACGAT GACGATGATGGTGGTTGGGGTGGACGCTCCGGTGGTGGACGTGGTCCTCG GTATGGCGGTGGTGGTTACAAGAAGCGCGGTCCTCGCTGGTAACGGACCA GCTCATAGGTACCGGCGCTCCCTCTCGCAATGCGCAGCTCCAAATCACCG ATCCAAAAGTCTGTCGCTCGTATCTCGTCGGCACTTGTCCGCATGACCTC TTCACCAATACCAAGCAAGACCTGGGCCCTTGTCAGAAAGTTCACAGCGA AGGATTGAAGACGGAGTATGAGACCGCCTCGGCAGCTGAGAAGGCCAAAT GGGGATTCGATTACGACTATATGCGCGACATGCAGAAATACATCGATGAT TGTGACCGACGTATCGATACCGCTCAGCGACGCTTGGAAAAGACTCCGGA CGAGATCAGGCAGACCAACAACTTGATGGCGGCGGAACAAAGAAAGCTGC TTGAGCAGCTCATGGGAGCTGAAGCAAATCTCCGACCTGACCAAAACCAT CAACACGGGTCTCCTCGAGATCTCGGTGCTAGGCGAAACCGGCTCCGTCG CACAGGCCCTGAACGAACTCCACAAGATCCGCACAGCCAAGCATCAAAAG GAAACGTGTGAGCGAGAATTGAAGAACCTTCAAGATACCTCCGGACCTTC AGGTCATCAGAAGCTGCAAGTGTGCGATGTCTGCGGCGCGTACCTGAGTC GTCTCGATAACGATCGTCGGTTGGCGGACCATTTCTTCGGAAAGATGCAC ATGGGATACTCGGACATGCGCAAGGGGTATAAGAAGCTCAGCGAGGAGCT TAAGGGACGGCCTCCGCCGGTTCGTCACCACGATGACGATGATGGTGGTT GGGGTGGACGCTCCGGTGGTGGACGTGGTCCTCGGTATGGCGGTGGTGGT TACAAGAAGCGCGGTCCTCGCTGGTAACGGACCAGCTCATAGGTACCGGC GCTCCCTCTCGCAATGCGCAGCTCCAAATCACCGATCCAAAAGTCTGTCG CTCGTATCTCGTCGGCACTTGTCCGCATGACCTCTTCACCAATACCAAGC AAGACCTGGGCCCTTGTCAGAAAGTTCACAGCGAAGGATTGAAGACGGAG TATGAGACCGCCTCGGCAGCTGAGAAGGCCAAATGGGGATTCGATTACGA CTATATGCGCGACATGCAGAAATACATCGATGATTGTGACCGACGTATCG ATACCGCTCAGCGACGCTTGGAAAAGACTCCGGACGAGATCAGGCAGACC AACAACTTGATGGCGGCGGAACAAAGAAAGCTGCTTGAGCAGCTCATGGG AG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0005685 | U1 snRNP |
Vocabulary: Molecular Function
Term | Definition |
GO:0003729 | mRNA binding |
Vocabulary: Biological Process
Term | Definition |
GO:0006376 | mRNA splice site selection |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
Property Name | Value |
Note | EggNog:ENOG41 |
Note | BUSCO:EOG09264D7Y |
DBxref | InterPro:IPR004882 |
DBxref | PFAM:PF03194 |
Product | LUC7-domain-containing protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
KZ851957.1 | supercontig | KZ851957.1:90089..91245 - |
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