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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851967.1:5846..8038+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_290523-T1 ID=M747DRAFT_290523-T1|Name=M747DRAFT_290523-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2193bp|location=Sequence derived from alignment at KZ851967.1:5846..8038+ (Aspergillus niger ATCC 13496)
CATTTTTTGACCAATTCCGCATTGATTTGGGACGAGGGTGTGACTTGGAA
GGACTATAGAATACAGCTATACTTAAAATGGCCCCCAAACCACCCCCGGG
CACCTCCGCCAGAGCATGGGACGGAGTGACGCCCGCCCTGTCGGAATGGG
TGCTGGATGCCGTTGCTTCTATGGGCTTCACCCGCATGACCCCCGTTCAG
GCTTCTGCGATTCCCTTGTTCATGGCGCATAAAGATGTCGTTGTTGAAGC
AGTCACAGGAAGTGGAAAGACCTTGTCTTTCTTGATTCCAGTTGTCGAGA
AGCTTTTGCGCCTGGAAGAACCACTCAAGAAACACCATGTCGGAGCCATC
ATCATCTCTCCAACCAGGTTGGTCATACCGTATACCGTTGAAAAGGTCAC
GGTCACAGTACTGACAGTTGCGCTTAAGAGAACTCGCATCGCAGATTTAC
AACGTTCTGACATCGTTGCTCGCCTTCCATCCTCCATCCGCCTCCACTCT
CAAACCCTCCGATGATGACGATGATGCACCTCGTCAGAAATTCCCCTCCT
CGACCCTCAAAGTTGTCCCGCAGCTCCTTCTCGGTGGTTCGACCACTCCG
GCTGAGGATTTGAGTACCTTCTTGAAGCGGTCTCCCAATCTGTTGGTATC
TACGCCAGGACGACTGTTGGAGTTGCTCTCTTCACCCCATGTCCACTGCC
CCCAGTCGTCTTTCGAAATGCTTGTCATGGATGAAGCGGACAGGCTTCTG
GATCTTGGATTCAAGGATACACTACAGAACATCTTGCGCCGTCTACCCAA
GCAACGGCGCACGGGGTTGTTCAGTGCCAGTGTCAGTGAGGCTGTTGATC
AGATTGTTCGGGTTGGTCTGCGCAACCCCGTCAAAGTCATGGTCAAGGTA
AAGGGCACTTCAGGTGTTCAGGATAAACGCACACCCGCTAGGTCCGTACC
CTTGTTCCTCCATCATTGAAGATCCTGTAACTGACAGCCATACTAGCTTG
CAAATGACGTACCTCACAGCTCCCCCAACTCACAAATTCCCTGCCATCAA
ACACATTCTCTACTCACTCGAGCCCGCTCCTCAAAAGACCATCATGTTCG
TCTCAACATGCTCGGGTGTCGACTACCTCTCCGCAATCCTTCCTTCAATC
ATCGGCGATGACTTCCAACTGATCCCGCTGCACGGCAAACACCAAGCAAA
CGTCCGCGAAAAGAACTTCAACCGCTTCGTCAACTCCCACACCCCCGCCA
TTCTCCTCACCACCGACGTTGCTTCCCGTGGACTAGACATCCCCTCAGTC
GACGTCGTAATACAGATTGACCCCCCTTCAGACCCAAAGACTTTCATCCA
CAGATGCGGCCGTGCCGGACGTGCAGGCCGCAAAGGTCTGAGTGTGGTCC
TTCTTCACCCCGGCCGAGAGGAAGACTACGTCTCGTTCCTCGAAGTCCGC
AAGACCCCCGTCGCACCGTATCCTCACACTCTCACCATAACCGACGCAGA
CGCCGCTGCAGCCACCGAAACGGCACGTAAAGCCGTCCTTGCAGACCGCG
CACTACACGACAGGGGCCAGAAGGCCTTCGTCAGCTGGTTCCGAAGCTAC
AGCAAGCACCAGGCTAGCAGCATATTCCGCGTCGCAGACCTCGATTGGGA
AGGACTAGGCAATGCATGGGGTCTCCTGAAGCTTCCCAAGATGCCCGAGT
TGAGAAACTTCCAAGGTGACCGGACGCTCGGCGTGAACTTGGACTGGGAG
AACTACGCATACAAGGACAAACAGCGCGAGAAGCGCCGGAAGGAACAAGT
GCAGGAGAATGCCGAGAACGGTGTCGCGGACGATCAAGCTGCTGGCAAGA
AGCGCTCCAGCGAGAGCGTCGCGTGGAGCAGGAATCTCGACAACCGGAAT
AAAAAGCTGAAGCGTCGGGAGGCCAAGCAAGCGCGTCAGCAGAAGGACAA
ATGGGAGAAGATGACGGAGGAAGAGCGACAAAAGGTGCTCGAGACGGAGA
AGATGCTTGAGCAGATCCGGGTGAAGAACGAAGAAGAACGACTGCTTAGG
CGTGCAGCCAAAGATAAGGAATCTAAGGCTGCTGGTGGGGATGATGATGA
TGAGTTCAAGGGGTTTGACTGATTGATATGTCTGATTGGATTGGCATGTA
GTATATACATTATATCTTATCTAGTTGTCTGATACCACGTCCG back to topCoding sequence (CDS) from alignment at KZ851967.1:5846..8038+ >M747DRAFT_290523-T1 ID=M747DRAFT_290523-T1|Name=M747DRAFT_290523-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=5787bp|location=Sequence derived from alignment at KZ851967.1:5846..8038+ (Aspergillus niger ATCC 13496)
ATGGCCCCCAAACCACCCCCGGGCACCTCCGCCAGAGCATGGGACGGAGT
GACGCCCGCCCTGTCGGAATGGGTGCTGGATGCCGTTGCTTCTATGGGCT
TCACCCGCATGACCCCCGTTCAGGCTTCTGCGATTCCCTTGTTCATGGCG
CATAAAGATGTCGTTGTTGAAGCAGTCACAGGAAGTGGAAAGACCTTGTC
TTTCTTGATTCCAGTTGTCGAGAAGCTTTTGCGCCTGGAAGAACCACTCA
AGAAACACCATGTCGGAGCCATCATCATCTCTCCAACCAGAGAACTCGCA
TCGCAGATTTACAACGTTCTGACATCGTTGCTCGCCTTCCATCCTCCATC
CGCCTCCACTCTCAAACCCTCCGATGATGACGATGATGCACCTCGTCAGA
AATTCCCCTCCTCGACCCTCAAAGTTGTCCCGCAGCTCCTTCTCGGTGGT
TCGACCACTCCGGCTGAGGATTTGAGTACCTTCTTGAAGCGGTCTCCCAA
TCTGTTGGTATCTACGCCAGGACGACTGTTGGAGTTGCTCTCTTCACCCC
ATGTCCACTGCCCCCAGTCGTCTTTCGAAATGCTTGTCATGGATGAAGCG
GACAGGCTTCTGGATCTTGGATTCAAGGATACACTACAGAACATCTTGCG
CCGTCTACCCAAGCAACGGCGCACGGGGTTGTTCAGTGCCAGTGTCAGTG
AGGCTGTTGATCAGATTGTTCGGGTTGGTCTGCGCAACCCCGTCAAAGTC
ATGGTCAAGGTAAAGGGCACTTCAGGTGTTCAGGATAAACGCACACCCGC
TAGCTTGCAAATGACGTACCTCACAGCTCCCCCAACTCACAAATTCCCTG
CCATCAAACACATTCTCTACTCACTCGAGCCCGCTCCTCAAAAGACCATC
ATGTTCGTCTCAACATGCTCGGGTGTCGACTACCTCTCCGCAATCCTTCC
TTCAATCATCGGCGATGACTTCCAACTGATCCCGCTGCACGGCAAACACC
AAGCAAACGTCCGCGAAAAGAACTTCAACCGCTTCGTCAACTCCCACACC
CCCGCCATTCTCCTCACCACCGACGTTGCTTCCCGTGGACTAGACATCCC
CTCAGTCGACGTCGTAATACAGATTGACCCCCCTTCAGACCCAAAGACTT
TCATCCACAGATGCGGCCGTGCCGGACGTGCAGGCCGCAAAGGTCTGAGT
GTGGTCCTTCTTCACCCCGGCCGAGAGGAAGACTACGTCTCGTTCCTCGA
AGTCCGCAAGACCCCCGTCGCACCGTATCCTCACACTCTCACCATAACCG
ACGCAGACGCCGCTGCAGCCACCGAAACGGCACGTAAAGCCGTCCTTGCA
GACCGCGCACTACACGACAGGGGCCAGAAGGCCTTCGTCAGCTGGTTCCG
AAGCTACAGCAAGCACCAGGCTAGCAGCATATTCCGCGTCGCAGACCTCG
ATTGGGAAGGACTAGGCAATGCATGGGGTCTCCTGAAGCTTCCCAAGATG
CCCGAGTTGAGAAACTTCCAAGGTGACCGGACGCTCGGCGTGAACTTGGA
CTGGGAGAACTACGCATACAAGGACAAACAGCGCGAGAAGCGCCGGAAGG
AACAAGTGCAGGAGAATGCCGAGAACGGTGTCGCGGACGATCAAGCTGCT
GGCAAGAAGCGCTCCAGCGAGAGCGTCGCGTGGAGCAGGAATCTCGACAA
CCGGAATAAAAAGCTGAAGCGTCGGGAGGCCAAGCAAGCGCGTCAGCAGA
AGGACAAATGGGAGAAGATGACGGAGGAAGAGCGACAAAAGGTGCTCGAG
ACGGAGAAGATGCTTGAGCAGATCCGGGTGAAGAACGAAGAAGAACGACT
GCTTAGGCGTGCAGCCAAAGATAAGGAATCTAAGGCTGCTGGTGGGGATG
ATGATGATGAGTTCAAGGGGTTTGACTGAATGGCCCCCAAACCACCCCCG
GGCACCTCCGCCAGAGCATGGGACGGAGTGACGCCCGCCCTGTCGGAATG
GGTGCTGGATGCCGTTGCTTCTATGGGCTTCACCCGCATGACCCCCGTTC
AGGCTTCTGCGATTCCCTTGTTCATGGCGCATAAAGATGTCGTTGTTGAA
GCAGTCACAGGAAGTGGAAAGACCTTGTCTTTCTTGATTCCAGTTGTCGA
GAAGCTTTTGCGCCTGGAAGAACCACTCAAGAAACACCATGTCGGAGCCA
TCATCATCTCTCCAACCAGAGAACTCGCATCGCAGATTTACAACGTTCTG
ACATCGTTGCTCGCCTTCCATCCTCCATCCGCCTCCACTCTCAAACCCTC
CGATGATGACGATGATGCACCTCGTCAGAAATTCCCCTCCTCGACCCTCA
AAGTTGTCCCGCAGCTCCTTCTCGGTGGTTCGACCACTCCGGCTGAGGAT
TTGAGTACCTTCTTGAAGCGGTCTCCCAATCTGTTGGTATCTACGCCAGG
ACGACTGTTGGAGTTGCTCTCTTCACCCCATGTCCACTGCCCCCAGTCGT
CTTTCGAAATGCTTGTCATGGATGAAGCGGACAGGCTTCTGGATCTTGGA
TTCAAGGATACACTACAGAACATCTTGCGCCGTCTACCCAAGCAACGGCG
CACGGGGTTGTTCAGTGCCAGTGTCAGTGAGGCTGTTGATCAGATTGTTC
GGGTTGGTCTGCGCAACCCCGTCAAAGTCATGGTCAAGGTAAAGGGCACT
TCAGGTGTTCAGGATAAACGCACACCCGCTAGCTTGCAAATGACGTACCT
CACAGCTCCCCCAACTCACAAATTCCCTGCCATCAAACACATTCTCTACT
CACTCGAGCCCGCTCCTCAAAAGACCATCATGTTCGTCTCAACATGCTCG
GGTGTCGACTACCTCTCCGCAATCCTTCCTTCAATCATCGGCGATGACTT
CCAACTGATCCCGCTGCACGGCAAACACCAAGCAAACGTCCGCGAAAAGA
ACTTCAACCGCTTCGTCAACTCCCACACCCCCGCCATTCTCCTCACCACC
GACGTTGCTTCCCGTGGACTAGACATCCCCTCAGTCGACGTCGTAATACA
GATTGACCCCCCTTCAGACCCAAAGACTTTCATCCACAGATGCGGCCGTG
CCGGACGTGCAGGCCGCAAAGGTCTGAGTGTGGTCCTTCTTCACCCCGGC
CGAGAGGAAGACTACGTCTCGTTCCTCGAAGTCCGCAAGACCCCCGTCGC
ACCGTATCCTCACACTCTCACCATAACCGACGCAGACGCCGCTGCAGCCA
CCGAAACGGCACGTAAAGCCGTCCTTGCAGACCGCGCACTACACGACAGG
GGCCAGAAGGCCTTCGTCAGCTGGTTCCGAAGCTACAGCAAGCACCAGGC
TAGCAGCATATTCCGCGTCGCAGACCTCGATTGGGAAGGACTAGGCAATG
CATGGGGTCTCCTGAAGCTTCCCAAGATGCCCGAGTTGAGAAACTTCCAA
GGTGACCGGACGCTCGGCGTGAACTTGGACTGGGAGAACTACGCATACAA
GGACAAACAGCGCGAGAAGCGCCGGAAGGAACAAGTGCAGGAGAATGCCG
AGAACGGTGTCGCGGACGATCAAGCTGCTGGCAAGAAGCGCTCCAGCGAG
AGCGTCGCGTGGAGCAGGAATCTCGACAACCGGAATAAAAAGCTGAAGCG
TCGGGAGGCCAAGCAAGCGCGTCAGCAGAAGGACAAATGGGAGAAGATGA
CGGAGGAAGAGCGACAAAAGGTGCTCGAGACGGAGAAGATGCTTGAGCAG
ATCCGGGTGAAGAACGAAGAAGAACGACTGCTTAGGCGTGCAGCCAAAGA
TAAGGAATCTAAGGCTGCTGGTGGGGATGATGATGATGAGTTCAAGGGGT
TTGACTGAATGGCCCCCAAACCACCCCCGGGCACCTCCGCCAGAGCATGG
GACGGAGTGACGCCCGCCCTGTCGGAATGGGTGCTGGATGCCGTTGCTTC
TATGGGCTTCACCCGCATGACCCCCGTTCAGGCTTCTGCGATTCCCTTGT
TCATGGCGCATAAAGATGTCGTTGTTGAAGCAGTCACAGGAAGTGGAAAG
ACCTTGTCTTTCTTGATTCCAGTTGTCGAGAAGCTTTTGCGCCTGGAAGA
ACCACTCAAGAAACACCATGTCGGAGCCATCATCATCTCTCCAACCAGAG
AACTCGCATCGCAGATTTACAACGTTCTGACATCGTTGCTCGCCTTCCAT
CCTCCATCCGCCTCCACTCTCAAACCCTCCGATGATGACGATGATGCACC
TCGTCAGAAATTCCCCTCCTCGACCCTCAAAGTTGTCCCGCAGCTCCTTC
TCGGTGGTTCGACCACTCCGGCTGAGGATTTGAGTACCTTCTTGAAGCGG
TCTCCCAATCTGTTGGTATCTACGCCAGGACGACTGTTGGAGTTGCTCTC
TTCACCCCATGTCCACTGCCCCCAGTCGTCTTTCGAAATGCTTGTCATGG
ATGAAGCGGACAGGCTTCTGGATCTTGGATTCAAGGATACACTACAGAAC
ATCTTGCGCCGTCTACCCAAGCAACGGCGCACGGGGTTGTTCAGTGCCAG
TGTCAGTGAGGCTGTTGATCAGATTGTTCGGGTTGGTCTGCGCAACCCCG
TCAAAGTCATGGTCAAGGTAAAGGGCACTTCAGGTGTTCAGGATAAACGC
ACACCCGCTAGCTTGCAAATGACGTACCTCACAGCTCCCCCAACTCACAA
ATTCCCTGCCATCAAACACATTCTCTACTCACTCGAGCCCGCTCCTCAAA
AGACCATCATGTTCGTCTCAACATGCTCGGGTGTCGACTACCTCTCCGCA
ATCCTTCCTTCAATCATCGGCGATGACTTCCAACTGATCCCGCTGCACGG
CAAACACCAAGCAAACGTCCGCGAAAAGAACTTCAACCGCTTCGTCAACT
CCCACACCCCCGCCATTCTCCTCACCACCGACGTTGCTTCCCGTGGACTA
GACATCCCCTCAGTCGACGTCGTAATACAGATTGACCCCCCTTCAGACCC
AAAGACTTTCATCCACAGATGCGGCCGTGCCGGACGTGCAGGCCGCAAAG
GTCTGAGTGTGGTCCTTCTTCACCCCGGCCGAGAGGAAGACTACGTCTCG
TTCCTCGAAGTCCGCAAGACCCCCGTCGCACCGTATCCTCACACTCTCAC
CATAACCGACGCAGACGCCGCTGCAGCCACCGAAACGGCACGTAAAGCCG
TCCTTGCAGACCGCGCACTACACGACAGGGGCCAGAAGGCCTTCGTCAGC
TGGTTCCGAAGCTACAGCAAGCACCAGGCTAGCAGCATATTCCGCGTCGC
AGACCTCGATTGGGAAGGACTAGGCAATGCATGGGGTCTCCTGAAGCTTC
CCAAGATGCCCGAGTTGAGAAACTTCCAAGGTGACCGGACGCTCGGCGTG
AACTTGGACTGGGAGAACTACGCATACAAGGACAAACAGCGCGAGAAGCG
CCGGAAGGAACAAGTGCAGGAGAATGCCGAGAACGGTGTCGCGGACGATC
AAGCTGCTGGCAAGAAGCGCTCCAGCGAGAGCGTCGCGTGGAGCAGGAAT
CTCGACAACCGGAATAAAAAGCTGAAGCGTCGGGAGGCCAAGCAAGCGCG
TCAGCAGAAGGACAAATGGGAGAAGATGACGGAGGAAGAGCGACAAAAGG
TGCTCGAGACGGAGAAGATGCTTGAGCAGATCCGGGTGAAGAACGAAGAA
GAACGACTGCTTAGGCGTGCAGCCAAAGATAAGGAATCTAAGGCTGCTGG
TGGGGATGATGATGATGAGTTCAAGGGGTTTGACTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR014014 |
| DBxref | InterPro:IPR000629 |
| DBxref | InterPro:IPR011545 |
| DBxref | InterPro:IPR025313 |
| DBxref | InterPro:IPR001650 |
| DBxref | InterPro:IPR014001 |
| DBxref | PFAM:PF00271 |
| DBxref | PFAM:PF13959 |
| DBxref | PFAM:PF00270 |
| Product | ATP-dependent rRNA helicase spb4 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851967.1 | supercontig | KZ851967.1:5846..8038 + |
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