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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851968.1:38800..39672- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_290631-T1 ID=M747DRAFT_290631-T1|Name=M747DRAFT_290631-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=873bp|location=Sequence derived from alignment at KZ851968.1:38800..39672- (Aspergillus niger ATCC 13496)
CTCCCCAGCATTTAGATCTGCAACACGGCAGTGATCCTTTGCGTGAGCCT
CTTTAGACCGCTACACACGTTAAACCCACATTTTTAAACATGTCTGAGAC
TTCTGCCGGTATGCACATCCCAGGTCTCGTTTTTCTCATGGCCATATACT
GACAATTTCTATAGCCTGGCCCCTCGCCGATGAGGCCCTTACCCAGAACC
TCCTGGACCTTGTCCAGCAGGCCGGTCACTACCGCCAGCTGAAGAAGGGT
GCTAACGAGGGTATGTGCTTCCTCAAGAACACTCATTGTCTGTCTGTCTG
CTAACTGTCTTTGCAGCCACCAAGACTCTTAACCGTGGTACCTCCGAGCT
CGTTATCCTCGCTGCCGACACCTCTCCCCTCGCTATCCTCCTCCACATCC
CCCTCCTTGCTGAGGACAAGAACACCCCTTATGTCTTCGTGCCCAGCAAG
CTTGCTCTCGGCCGTGCTACCGGTGTTTCCCGCCCCGTGATTGCGGCCAG
TATCACCACCAACGAGGCCAGTGACCTCCAGGGCCAGATCAAGACCATCA
AGGACAAGGTCGAGAGACTGATGATCTAAGCGTTGGTCTTGTTGTGGAAA
CCCTCCGGAGGATTATGCCTCCGCGGGTTGCTAAGAGGAATCTATTGTGA
CTTCGGGAGTTGGCCGGCCATGACAGACGAGGTTTTCGCCCCACAGTGCG
AAAACAAGTGTCGATGAATGGTTTGGATCGCTACCGGATGCTCAATTGGA
TGCTGTGGGCGTTGTGCGCCTGGAATTAGTGCAGATAAAAGTCAATGACA
AAAAAAATGTGCCAAAATTTGTGTAGTATATTTTGGTTGCTCTAATGCCG
AGTAGTTGAAGGCGCGATTCCGG back to topCoding sequence (CDS) from alignment at KZ851968.1:38800..39672- >M747DRAFT_290631-T1 ID=M747DRAFT_290631-T1|Name=M747DRAFT_290631-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1134bp|location=Sequence derived from alignment at KZ851968.1:38800..39672- (Aspergillus niger ATCC 13496)
CCACCAAGACTCTTAACCGTGGTACCTCCGAGCTCGTTATCCTCGCTGCC
GACACCTCTCCCCTCGCTATCCTCCTCCACATCCCCCTCCTTGCTGAGGA
CAAGAACACCCCTTATGTCTTCGTGCCCAGCAAGCTTGCTCTCGGCCGTG
CTACCGGTGTTTCCCGCCCCGTGATTGCGGCCAGTATCACCACCAACGAG
GCCAGTGACCTCCAGGGCCAGATCAAGACCATCAAGGACAAGGTCGAGAG
ACTGATGATCTAACCTGGCCCCTCGCCGATGAGGCCCTTACCCAGAACCT
CCTGGACCTTGTCCAGCAGGCCGGTCACTACCGCCAGCTGAAGAAGGGTG
CTAACGAGGATGTCTGAGACTTCTGCCGCCACCAAGACTCTTAACCGTGG
TACCTCCGAGCTCGTTATCCTCGCTGCCGACACCTCTCCCCTCGCTATCC
TCCTCCACATCCCCCTCCTTGCTGAGGACAAGAACACCCCTTATGTCTTC
GTGCCCAGCAAGCTTGCTCTCGGCCGTGCTACCGGTGTTTCCCGCCCCGT
GATTGCGGCCAGTATCACCACCAACGAGGCCAGTGACCTCCAGGGCCAGA
TCAAGACCATCAAGGACAAGGTCGAGAGACTGATGATCTAACCTGGCCCC
TCGCCGATGAGGCCCTTACCCAGAACCTCCTGGACCTTGTCCAGCAGGCC
GGTCACTACCGCCAGCTGAAGAAGGGTGCTAACGAGGATGTCTGAGACTT
CTGCCGCCACCAAGACTCTTAACCGTGGTACCTCCGAGCTCGTTATCCTC
GCTGCCGACACCTCTCCCCTCGCTATCCTCCTCCACATCCCCCTCCTTGC
TGAGGACAAGAACACCCCTTATGTCTTCGTGCCCAGCAAGCTTGCTCTCG
GCCGTGCTACCGGTGTTTCCCGCCCCGTGATTGCGGCCAGTATCACCACC
AACGAGGCCAGTGACCTCCAGGGCCAGATCAAGACCATCAAGGACAAGGT
CGAGAGACTGATGATCTAACCTGGCCCCTCGCCGATGAGGCCCTTACCCA
GAACCTCCTGGACCTTGTCCAGCAGGCCGGTCACTACCGCCAGCTGAAGA
AGGGTGCTAACGAGGATGTCTGAGACTTCTGCCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005730 | nucleolus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003723 | RNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR004038 |
| DBxref | InterPro:IPR029064 |
| DBxref | InterPro:IPR002415 |
| DBxref | InterPro:IPR018492 |
| DBxref | PFAM:PF01248 |
| Product | RNA binding protein snu13 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851968.1 | supercontig | KZ851968.1:38800..39672 - |
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