You are here

Home

M747DRAFT_291303-T1, M747DRAFT_291303-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_291303-T1
Unique NameM747DRAFT_291303-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851899.1:15302..17260+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_291303-T1 ID=M747DRAFT_291303-T1|Name=M747DRAFT_291303-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1959bp|location=Sequence derived from alignment at KZ851899.1:15302..17260+ (Aspergillus niger ATCC 13496)
AGACACACACATGCACTTCCTACAACAACATGAACGTGCTCGAACTCGAC
CTGGCGGGCTCATTCCACCAGTCCAAACCAGCCCGTCGTGTCGGCCTGGC
ATGTGCGCCCTGTCGCAAAAAACACCTCCGCTGCGACGCGAGAACCCCCG
TATGTGCCCGCTGCATCGCTGACAATAAGCAATGCGTCTATGAGAAGTCG
CGTCGAGGCGGACGCCGTCGCAAGCCGTCAGAGTCAGCATCAGGATTGGG
ATCCGGTGGGAATTCAACAGCATCGTCTGCACTTCTGACTCCGGGTCTCC
CTGCCGATCAATTGTGGGTCCCGTCATCGTCACCGGAGTCTGTCATGGTG
CCAGCAGTTCAGGCACAGGCCAGGAGCACAACAAGTGGCTCGATGACACA
TCCTGCACTCTCTGCAACGGCTGAAAATGATGCCTTAAGAACAGATCGGC
TGTATAACCTTTACTACACTTTTTTCCATCCCGCGCATCCATGCGTTTTA
CCATGGCGGTTCCTCAGCCAGCGCCTCGAGACAGAGCGCGAGACAATACA
ACCGCTCCTTTATGTGATGCAGTATATCGGGGCACACTATGCAGATGACG
TTGATGCGTCGCCACTGGCGACAATCTCCGAGTCACGATTAGCTCCTATA
CGCAGCAAACAAGCCGCTGCGACCGGGTTCGACGTGCAGGCCATGATCCT
CTACTCGATTGCAGTGTACTGGTGCGATGAAATAGACCGGGGTGTTAATT
TACTCAAAGAAGCCATTCAAATGGCCTTGAATATACAAATGAACAAGAAA
GATTATGCTACACATTTTGGCCAGAATGACCCGATGCTAGAAGAAAGCTG
GCGTCGCACCTGGTGGCTTGTATACATCACGGATGCCCACGTGGCTGGTA
GCACCCATGTCTACCCATTTCGCACGAGCAATATAGACATGAGTGTCGAT
CTTCCATGCGAAGAGGAAGACTATGAAGCTGGGGTAATTTGCCCTCCGAC
AACCCTCGAAGTATACGACATCCGGGAATTTCTCCCAGAAGCAGACCGAC
CCAGCTTCTCCTCTTACGCAGAGCTCATTGGCTTAACCCGTTCAATAGAC
AAAGCCTTAGCATCCGACTGGTCCAAAAACGCCGCCCTGGTCCACACAAT
TTGCGAGAATGCCGACATCAGCGTCGCGGCCTGGCACTCGCTACTTCCAC
CCTGCAAGCGAGACCCGCTACGCAGCGACGGCACCGTCGATGAAATCATG
TTCAAATCCAAGTTCATCCTCCACGCATACGCTATAGAGATACATCGTCC
ATTATCAACCTTGGCGTACAGTTCCGTCGAGTCGACCTGCAAATGCGCAC
CCCCGGTACCAGCTGAAGACGCCCCAGGATCAGACACCACTCAAATCCAG
CTCCACACACTCAAATGTTTGCACGCGATAGACCAACTCGGGCGGCTCAT
GATACTCCCCGCTAATATCCACGCTCATACCCCATTCATCATCTGCATGA
TTGCCAACGCCACCATTGCCCATTTAGCCGCCTGTCGGTACGTATTTGCC
GGGCCGGACCTCCAGCTTGGTCGTGAGAGAATCCGTCTCAGTATGGGTAC
TTTAAAGAGGCTGAGTGAACATTGGGGGCAGGGAAAGAGAATTTATCGAG
AGATGGGGATTGTTGCGAGGGAGATCCTGTCCCTTGCGGATCGGGAGAAG
GGTAGTCATGATCGAGTTGGATTCTCTACGAAAGGTACATTATCAGGCAT
GCCGAATACACCTGCTGCACTGGAGTTTTCGTCATTCGACATGCATAATA
TGAACGTGGCAGAGTTCAATTTCTGTGGGTATTTCGATGGGGCTATTGGT
GAGGTAGTTGAGCCTGCTTCATTTCTGGTTGTCTGAACGTGAAATTTAGA
CTCTTTCTGTATCTAATTACCCCTATCGCTTACTCCTCTGTACCTGGGCT
TTTAGGAAT
back to top

Coding sequence (CDS) from alignment at KZ851899.1:15302..17260+

>M747DRAFT_291303-T1 ID=M747DRAFT_291303-T1|Name=M747DRAFT_291303-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1857bp|location=Sequence derived from alignment at KZ851899.1:15302..17260+ (Aspergillus niger ATCC 13496)
ATGAACGTGCTCGAACTCGACCTGGCGGGCTCATTCCACCAGTCCAAACC
AGCCCGTCGTGTCGGCCTGGCATGTGCGCCCTGTCGCAAAAAACACCTCC
GCTGCGACGCGAGAACCCCCGTATGTGCCCGCTGCATCGCTGACAATAAG
CAATGCGTCTATGAGAAGTCGCGTCGAGGCGGACGCCGTCGCAAGCCGTC
AGAGTCAGCATCAGGATTGGGATCCGGTGGGAATTCAACAGCATCGTCTG
CACTTCTGACTCCGGGTCTCCCTGCCGATCAATTGTGGGTCCCGTCATCG
TCACCGGAGTCTGTCATGGTGCCAGCAGTTCAGGCACAGGCCAGGAGCAC
AACAAGTGGCTCGATGACACATCCTGCACTCTCTGCAACGGCTGAAAATG
ATGCCTTAAGAACAGATCGGCTGTATAACCTTTACTACACTTTTTTCCAT
CCCGCGCATCCATGCGTTTTACCATGGCGGTTCCTCAGCCAGCGCCTCGA
GACAGAGCGCGAGACAATACAACCGCTCCTTTATGTGATGCAGTATATCG
GGGCACACTATGCAGATGACGTTGATGCGTCGCCACTGGCGACAATCTCC
GAGTCACGATTAGCTCCTATACGCAGCAAACAAGCCGCTGCGACCGGGTT
CGACGTGCAGGCCATGATCCTCTACTCGATTGCAGTGTACTGGTGCGATG
AAATAGACCGGGGTGTTAATTTACTCAAAGAAGCCATTCAAATGGCCTTG
AATATACAAATGAACAAGAAAGATTATGCTACACATTTTGGCCAGAATGA
CCCGATGCTAGAAGAAAGCTGGCGTCGCACCTGGTGGCTTGTATACATCA
CGGATGCCCACGTGGCTGGTAGCACCCATGTCTACCCATTTCGCACGAGC
AATATAGACATGAGTGTCGATCTTCCATGCGAAGAGGAAGACTATGAAGC
TGGGGTAATTTGCCCTCCGACAACCCTCGAAGTATACGACATCCGGGAAT
TTCTCCCAGAAGCAGACCGACCCAGCTTCTCCTCTTACGCAGAGCTCATT
GGCTTAACCCGTTCAATAGACAAAGCCTTAGCATCCGACTGGTCCAAAAA
CGCCGCCCTGGTCCACACAATTTGCGAGAATGCCGACATCAGCGTCGCGG
CCTGGCACTCGCTACTTCCACCCTGCAAGCGAGACCCGCTACGCAGCGAC
GGCACCGTCGATGAAATCATGTTCAAATCCAAGTTCATCCTCCACGCATA
CGCTATAGAGATACATCGTCCATTATCAACCTTGGCGTACAGTTCCGTCG
AGTCGACCTGCAAATGCGCACCCCCGGTACCAGCTGAAGACGCCCCAGGA
TCAGACACCACTCAAATCCAGCTCCACACACTCAAATGTTTGCACGCGAT
AGACCAACTCGGGCGGCTCATGATACTCCCCGCTAATATCCACGCTCATA
CCCCATTCATCATCTGCATGATTGCCAACGCCACCATTGCCCATTTAGCC
GCCTGTCGGTACGTATTTGCCGGGCCGGACCTCCAGCTTGGTCGTGAGAG
AATCCGTCTCAGTATGGGTACTTTAAAGAGGCTGAGTGAACATTGGGGGC
AGGGAAAGAGAATTTATCGAGAGATGGGGATTGTTGCGAGGGAGATCCTG
TCCCTTGCGGATCGGGAGAAGGGTAGTCATGATCGAGTTGGATTCTCTAC
GAAAGGTACATTATCAGGCATGCCGAATACACCTGCTGCACTGGAGTTTT
CGTCATTCGACATGCATAATATGAACGTGGCAGAGTTCAATTTCTGTGGG
TATTTCGATGGGGCTATTGGTGAGGTAGTTGAGCCTGCTTCATTTCTGGT
TGTCTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677DNA binding
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_291303M747DRAFT_291303Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291303-T1.utr5p1M747DRAFT_291303-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291303-T1.exon1M747DRAFT_291303-T1.exon1Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291303-T1.cdsM747DRAFT_291303-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291303-T1.utr3p1M747DRAFT_291303-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291303-T1M747DRAFT_291303-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefInterPro:IPR007219
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851899.1supercontigKZ851899.1:15302..17260 +
Powered by Drupal