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M747DRAFT_291354-T1, M747DRAFT_291354-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_291354-T1
Unique NameM747DRAFT_291354-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851899.1:223381..224592-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_291354-T1 ID=M747DRAFT_291354-T1|Name=M747DRAFT_291354-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1212bp|location=Sequence derived from alignment at KZ851899.1:223381..224592- (Aspergillus niger ATCC 13496)
CTCGCGCCCACCATGTCGACCGATCCCAAGATCCAGTAATTACCCCTCTT
TTCCTACCCTCCTTTACATCCCGATGAGTCATTAGCTCTTGTCATGGTGT
AATCCGCTCCTCAACCTGCCGGACCTCATTGCTAACCTTGTCTTGCAATT
CATTAGGGACCTGCTCAACAAGCCTAAGAGCGAGCTCACGTACGTTATCG
AACCCCTCCTCTTCTTTCCGGCTTTTATCAAAGCTTTCTATTCCCGTGTT
CCTATCACATGATGCCCGATCCCCTTTGCACACCTATCAGTCCAACTACC
CATGCCCACCACAACCCATGATATCCGGATAGTGTCCCGCGCGCCTAATT
CTCATCGCGCCACATCATATCTATCTATCTACCAACCCATCATCGCCGTC
CATTCGCTAACCTGGCCCCTCATTCAGTGAATACGAGGTCTCCCTCGTCG
AGGAACATGAGCTCACTGCCGGTCCTTTGTCCCTTCTCCAAACCGCTACG
CGCACACACACCCAGGTCCTGATCTCATGCCGGAACAACCGCAAGCTCCT
CGCCCGTGTCAAGGCCTTCGACCGCCACTGCAACATGGTTCTGGAGAACG
TCAAGGAGATGTGGACCGAGAAGCCCAAGGGTGGTAACGGCAAGGGTGTT
AACAAGGATCGCTTCATCAGCAAGATGTAAGCATCGCCATTACCTACACT
CACCCTCTCCCCCCGCCAGAAACAATCCTAACCCAACCTTTTATTGTAGG
TTCCTCCGTGGTGACTCCGTCATCCTCGTCCTGCTCAGCTGAACTCTGTT
CACATGATGCGCTCATTTCCCTTCTCGAACGGTCCTGGGCCGGTCCGGGC
TTGGCTTCTCTCTGATCGAGCTGAAATCCGACGGAGACGAATTTTAGTTG
ACACAGACGAATGAACGATACCCTTTTAGTCGTGCGATACTTGCGGGATT
GGACGGGATGTTAGATTACATCATCACGTACAATCTGCCTCCCCGCCCAA
TTAATCCAGCCCTATCCGGACCTTGGCTCTCCTTTTCCTTCTCATTTCAT
ATATTGCTATTTTCCGATCTCAAATTCACCGTTCTCTCTGATTTACGGCG
GGGGCAGATTTGGCGTTCTCCGGACTCTTTTGTTTTCTTAAAGCTAGAAA
AAGGAATTTGAAGTGGAGTATCTCGGCTTGATAAAAGTAGGGGAGGACAT
TGATGAATCGGG
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Coding sequence (CDS) from alignment at KZ851899.1:223381..224592-

>M747DRAFT_291354-T1 ID=M747DRAFT_291354-T1|Name=M747DRAFT_291354-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1392bp|location=Sequence derived from alignment at KZ851899.1:223381..224592- (Aspergillus niger ATCC 13496)
GTTCCTCCGTGGTGACTCCGTCATCCTCGTCCTGCTCAGCTGATGAATAC
GAGGTCTCCCTCGTCGAGGAACATGAGCTCACTGCCGGTCCTTTGTCCCT
TCTCCAAACCGCTACGCGCACACACACCCAGGTCCTGATCTCATGCCGGA
ACAACCGCAAGCTCCTCGCCCGTGTCAAGGCCTTCGACCGCCACTGCAAC
ATGGTTCTGGAGAACGTCAAGGAGATGTGGACCGAGAAGCCCAAGGGTGG
TAACGGCAAGGGTGTTAACAAGGATCGCTTCATCAGCAAGATGGACCTGC
TCAACAAGCCTAAGAGCGAGCTCACATGTCGACCGATCCCAAGATCCAGT
TCCTCCGTGGTGACTCCGTCATCCTCGTCCTGCTCAGCTGATGAATACGA
GGTCTCCCTCGTCGAGGAACATGAGCTCACTGCCGGTCCTTTGTCCCTTC
TCCAAACCGCTACGCGCACACACACCCAGGTCCTGATCTCATGCCGGAAC
AACCGCAAGCTCCTCGCCCGTGTCAAGGCCTTCGACCGCCACTGCAACAT
GGTTCTGGAGAACGTCAAGGAGATGTGGACCGAGAAGCCCAAGGGTGGTA
ACGGCAAGGGTGTTAACAAGGATCGCTTCATCAGCAAGATGGACCTGCTC
AACAAGCCTAAGAGCGAGCTCACATGTCGACCGATCCCAAGATCCAGTTC
CTCCGTGGTGACTCCGTCATCCTCGTCCTGCTCAGCTGATGAATACGAGG
TCTCCCTCGTCGAGGAACATGAGCTCACTGCCGGTCCTTTGTCCCTTCTC
CAAACCGCTACGCGCACACACACCCAGGTCCTGATCTCATGCCGGAACAA
CCGCAAGCTCCTCGCCCGTGTCAAGGCCTTCGACCGCCACTGCAACATGG
TTCTGGAGAACGTCAAGGAGATGTGGACCGAGAAGCCCAAGGGTGGTAAC
GGCAAGGGTGTTAACAAGGATCGCTTCATCAGCAAGATGGACCTGCTCAA
CAAGCCTAAGAGCGAGCTCACATGTCGACCGATCCCAAGATCCAGTTCCT
CCGTGGTGACTCCGTCATCCTCGTCCTGCTCAGCTGATGAATACGAGGTC
TCCCTCGTCGAGGAACATGAGCTCACTGCCGGTCCTTTGTCCCTTCTCCA
AACCGCTACGCGCACACACACCCAGGTCCTGATCTCATGCCGGAACAACC
GCAAGCTCCTCGCCCGTGTCAAGGCCTTCGACCGCCACTGCAACATGGTT
CTGGAGAACGTCAAGGAGATGTGGACCGAGAAGCCCAAGGGTGGTAACGG
CAAGGGTGTTAACAAGGATCGCTTCATCAGCAAGATGGACCTGCTCAACA
AGCCTAAGAGCGAGCTCACATGTCGACCGATCCCAAGATCCA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0030532small nuclear ribonucleoprotein complex
Vocabulary: Biological Process
TermDefinition
GO:0008380RNA splicing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SMD2M747DRAFT_291354Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291354-T1M747DRAFT_291354-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291354-T1.cdsM747DRAFT_291354-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291354-T1.utr3p1M747DRAFT_291354-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291354-T1.exon4M747DRAFT_291354-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_291354-T1.exon3M747DRAFT_291354-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_291354-T1.exon2M747DRAFT_291354-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_291354-T1.exon1M747DRAFT_291354-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291354-T1.utr5p1M747DRAFT_291354-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09265IT6
DBxrefInterPro:IPR010920
DBxrefInterPro:IPR027248
DBxrefInterPro:IPR001163
DBxrefPFAM:PF01423
ProductmRNA splicing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851899.1supercontigKZ851899.1:223381..224592 -
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