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M747DRAFT_291509-T1, M747DRAFT_291509-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_291509-T1
Unique NameM747DRAFT_291509-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851899.1:722676..723559-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_291509-T1 ID=M747DRAFT_291509-T1|Name=M747DRAFT_291509-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=884bp|location=Sequence derived from alignment at KZ851899.1:722676..723559- (Aspergillus niger ATCC 13496)
AGCACACAATGTTCCTTCGTTCCGTTACTCGCGCTGCTGCTCGCAGCTCG
GCTGTGCCCACCACGGGCCTGCGCTCCTACCGCACCGTTTCGGGCCCAAT
GGCTTGCCTGAACGCTCGTCCTCAGACTGAGAAGAAGTCTATCGCTCCCC
AGCAGACCCGCGCCGCCTCCGAGCATGCCATCTCGAATCCCACACTCGCC
GGTATTGAGAAGCGCTGGGAGGCCATGCCCCCTCAGGAGCAGGCCGAGCT
GTGGATGCAGCTGAGGGACCGCATGAAGGTCGACTGGCACCAGATGACTC
TCCAGGAGAAGAAGGCCGGTATGCTGTTCTTTCTTGCCCCTTTCCGCTAT
CTTCCCCGCGTCCAGCAGAATTTTGCTAACATGGGCCATTTTTTCTTCTT
CCCCACGATTTAGCCTACTGGATCTCCTTCGGACCCCACGGCCCTCGTTC
CGTGCCCCCCAAGGGCGAGAACCTCAAGATCTTCTTCAAGGTCGCCCAGC
TCACCCTCGTCAGCTTTGGTATTTTCTACGTCATCCACCTGTTCGCCAAG
CCCCAGCCCAAGACCATGACCAAGGAGTGGCAGGAGGCCTCCAATGAGTA
TGCTAAGGTATGTGAAATCAACAATCTGCATCAGTTGCTCGCCAATTGGC
GTTGGCTGTACATTGGAACGGTCGCTGATGAGTATTATCACAACAGCAAG
AGAAGATCAACCCTATCTACGGCATCAGCGCCGAGGGTTACGAGGGCAAG
GGCTTCGTCCAGAGCCCCCCTGCTGAGAAGCAATAGAGTGCCACCGCTCC
CCGGGAGGAACAGGTATAACAACGGGGTGTGCAGTGGATGGGTAGTATTG
GGCTACAGGAATGAACTGCTGCCTCCCACCGCAC
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Coding sequence (CDS) from alignment at KZ851899.1:722676..723559-

>M747DRAFT_291509-T1 ID=M747DRAFT_291509-T1|Name=M747DRAFT_291509-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1782bp|location=Sequence derived from alignment at KZ851899.1:722676..723559- (Aspergillus niger ATCC 13496)
CAAGAGAAGATCAACCCTATCTACGGCATCAGCGCCGAGGGTTACGAGGG
CAAGGGCTTCGTCCAGAGCCCCCCTGCTGAGAAGCAATAGCCTACTGGAT
CTCCTTCGGACCCCACGGCCCTCGTTCCGTGCCCCCCAAGGGCGAGAACC
TCAAGATCTTCTTCAAGGTCGCCCAGCTCACCCTCGTCAGCTTTGGTATT
TTCTACGTCATCCACCTGTTCGCCAAGCCCCAGCCCAAGACCATGACCAA
GGAGTGGCAGGAGGCCTCCAATGAGTATGCTAAGATGTTCCTTCGTTCCG
TTACTCGCGCTGCTGCTCGCAGCTCGGCTGTGCCCACCACGGGCCTGCGC
TCCTACCGCACCGTTTCGGGCCCAATGGCTTGCCTGAACGCTCGTCCTCA
GACTGAGAAGAAGTCTATCGCTCCCCAGCAGACCCGCGCCGCCTCCGAGC
ATGCCATCTCGAATCCCACACTCGCCGGTATTGAGAAGCGCTGGGAGGCC
ATGCCCCCTCAGGAGCAGGCCGAGCTGTGGATGCAGCTGAGGGACCGCAT
GAAGGTCGACTGGCACCAGATGACTCTCCAGGAGAAGAAGGCCGCAAGAG
AAGATCAACCCTATCTACGGCATCAGCGCCGAGGGTTACGAGGGCAAGGG
CTTCGTCCAGAGCCCCCCTGCTGAGAAGCAATAGCCTACTGGATCTCCTT
CGGACCCCACGGCCCTCGTTCCGTGCCCCCCAAGGGCGAGAACCTCAAGA
TCTTCTTCAAGGTCGCCCAGCTCACCCTCGTCAGCTTTGGTATTTTCTAC
GTCATCCACCTGTTCGCCAAGCCCCAGCCCAAGACCATGACCAAGGAGTG
GCAGGAGGCCTCCAATGAGTATGCTAAGATGTTCCTTCGTTCCGTTACTC
GCGCTGCTGCTCGCAGCTCGGCTGTGCCCACCACGGGCCTGCGCTCCTAC
CGCACCGTTTCGGGCCCAATGGCTTGCCTGAACGCTCGTCCTCAGACTGA
GAAGAAGTCTATCGCTCCCCAGCAGACCCGCGCCGCCTCCGAGCATGCCA
TCTCGAATCCCACACTCGCCGGTATTGAGAAGCGCTGGGAGGCCATGCCC
CCTCAGGAGCAGGCCGAGCTGTGGATGCAGCTGAGGGACCGCATGAAGGT
CGACTGGCACCAGATGACTCTCCAGGAGAAGAAGGCCGCAAGAGAAGATC
AACCCTATCTACGGCATCAGCGCCGAGGGTTACGAGGGCAAGGGCTTCGT
CCAGAGCCCCCCTGCTGAGAAGCAATAGCCTACTGGATCTCCTTCGGACC
CCACGGCCCTCGTTCCGTGCCCCCCAAGGGCGAGAACCTCAAGATCTTCT
TCAAGGTCGCCCAGCTCACCCTCGTCAGCTTTGGTATTTTCTACGTCATC
CACCTGTTCGCCAAGCCCCAGCCCAAGACCATGACCAAGGAGTGGCAGGA
GGCCTCCAATGAGTATGCTAAGATGTTCCTTCGTTCCGTTACTCGCGCTG
CTGCTCGCAGCTCGGCTGTGCCCACCACGGGCCTGCGCTCCTACCGCACC
GTTTCGGGCCCAATGGCTTGCCTGAACGCTCGTCCTCAGACTGAGAAGAA
GTCTATCGCTCCCCAGCAGACCCGCGCCGCCTCCGAGCATGCCATCTCGA
ATCCCACACTCGCCGGTATTGAGAAGCGCTGGGAGGCCATGCCCCCTCAG
GAGCAGGCCGAGCTGTGGATGCAGCTGAGGGACCGCATGAAGGTCGACTG
GCACCAGATGACTCTCCAGGAGAAGAAGGCCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004129cytochrome-c oxidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
COX5M747DRAFT_291509Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291509-T1M747DRAFT_291509-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291509-T1.cdsM747DRAFT_291509-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291509-T1.utr3p1M747DRAFT_291509-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291509-T1.exon3M747DRAFT_291509-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_291509-T1.exon2M747DRAFT_291509-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_291509-T1.exon1M747DRAFT_291509-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291509-T1.utr5p1M747DRAFT_291509-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036639
DBxrefInterPro:IPR004203
DBxrefPFAM:PF02936
ProductCytochrome c oxidase subunit 5
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851899.1supercontigKZ851899.1:722676..723559 -
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