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M747DRAFT_291512-T1, M747DRAFT_291512-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_291512-T1
Unique NameM747DRAFT_291512-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851899.1:724351..725303-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_291512-T1 ID=M747DRAFT_291512-T1|Name=M747DRAFT_291512-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=953bp|location=Sequence derived from alignment at KZ851899.1:724351..725303- (Aspergillus niger ATCC 13496)
CTCTTTACCATCTCTCCCCTTTATCTACACAAATAACCATGTCTGTGAGT
AATACTCGCCCGTGTGTTCCCCTCTCAGGGCTAACCGTTTATTTCCCTGC
CTTGTAGCTCGCGTCTGGGTATGTTCCTGACTGCTTCTGATCTCCGCATG
TGTCTTCGACCATCCCTACAATATCGGGAACTCGACGATGACAACCGAAT
AAGGCTGACTAAGTTACGGAGGACAGTGTTTCCATCACCGATGAGTGCAT
CACCGCATTCAACGAGTTCCGCATGAGCGGCAACAGCAGGGGAAGCAAGA
CGAAGTTCATCATCTTTAAGATCGCCGACAACAAGAAGGAGGTTGTCATC
GACGAGGTTTCCCAGGACGAGGACTACGAGGTCTTCCGCGAAAAGCTCGC
GGCCGCTAAGGATGCTAAGGGCAACCCCGCTCCCCGTTATGCAGTTTACG
ACGTCGAGTACGACCTGGGCGGTGGTGAAGGCAAGAGGTATGATGATGAT
GACGATAGCCGAACGTTTACTTTAGCATATCTGCTCACTTTCTTCTCACC
ACAGGAGCAAGATCATCTTCATTTCCTGGGTTCCCAGCGACACCGCTACC
CTCGTACGTTCCGCACCGTCTCAGTTGTTCAAGCCCCCAAATCATTGCTG
ACACCGATGAAACAGTGGTCCATGATCTACGCCAGCACTCGCGAGAACCT
GAAGAACGCCCTCAACATCCACACCTCCATCCACGCCGACGACAAGTCCG
ACATCGAGTGGAAGACCGTCCTGGCCGAGGCCAGCGGTGGTAAGGCTGGC
AAATAAACAATGGCGCCGGCTGGGCCCGGGCCAGGTGACTAGGATGTTGC
AAATTGCAACAAATCACACTGACTCACTATGCGGAGTACCTCGGAACGAC
CAAATCCTTCAGTTTCTCTGCACAAACTTAGTTAAATGAGAGATCGTTAC
GAC
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Coding sequence (CDS) from alignment at KZ851899.1:724351..725303-

>M747DRAFT_291512-T1 ID=M747DRAFT_291512-T1|Name=M747DRAFT_291512-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2340bp|location=Sequence derived from alignment at KZ851899.1:724351..725303- (Aspergillus niger ATCC 13496)
TGGTCCATGATCTACGCCAGCACTCGCGAGAACCTGAAGAACGCCCTCAA
CATCCACACCTCCATCCACGCCGACGACAAGTCCGACATCGAGTGGAAGA
CCGTCCTGGCCGAGGCCAGCGGTGGTAAGGCTGGCAAATAAGAGCAAGAT
CATCTTCATTTCCTGGGTTCCCAGCGACACCGCTACCCTCTGTTTCCATC
ACCGATGAGTGCATCACCGCATTCAACGAGTTCCGCATGAGCGGCAACAG
CAGGGGAAGCAAGACGAAGTTCATCATCTTTAAGATCGCCGACAACAAGA
AGGAGGTTGTCATCGACGAGGTTTCCCAGGACGAGGACTACGAGGTCTTC
CGCGAAAAGCTCGCGGCCGCTAAGGATGCTAAGGGCAACCCCGCTCCCCG
TTATGCAGTTTACGACGTCGAGTACGACCTGGGCGGTGGTGAAGGCAAGA
GCTCGCGTCTGGATGTCTTGGTCCATGATCTACGCCAGCACTCGCGAGAA
CCTGAAGAACGCCCTCAACATCCACACCTCCATCCACGCCGACGACAAGT
CCGACATCGAGTGGAAGACCGTCCTGGCCGAGGCCAGCGGTGGTAAGGCT
GGCAAATAAGAGCAAGATCATCTTCATTTCCTGGGTTCCCAGCGACACCG
CTACCCTCTGTTTCCATCACCGATGAGTGCATCACCGCATTCAACGAGTT
CCGCATGAGCGGCAACAGCAGGGGAAGCAAGACGAAGTTCATCATCTTTA
AGATCGCCGACAACAAGAAGGAGGTTGTCATCGACGAGGTTTCCCAGGAC
GAGGACTACGAGGTCTTCCGCGAAAAGCTCGCGGCCGCTAAGGATGCTAA
GGGCAACCCCGCTCCCCGTTATGCAGTTTACGACGTCGAGTACGACCTGG
GCGGTGGTGAAGGCAAGAGCTCGCGTCTGGATGTCTTGGTCCATGATCTA
CGCCAGCACTCGCGAGAACCTGAAGAACGCCCTCAACATCCACACCTCCA
TCCACGCCGACGACAAGTCCGACATCGAGTGGAAGACCGTCCTGGCCGAG
GCCAGCGGTGGTAAGGCTGGCAAATAAGAGCAAGATCATCTTCATTTCCT
GGGTTCCCAGCGACACCGCTACCCTCTGTTTCCATCACCGATGAGTGCAT
CACCGCATTCAACGAGTTCCGCATGAGCGGCAACAGCAGGGGAAGCAAGA
CGAAGTTCATCATCTTTAAGATCGCCGACAACAAGAAGGAGGTTGTCATC
GACGAGGTTTCCCAGGACGAGGACTACGAGGTCTTCCGCGAAAAGCTCGC
GGCCGCTAAGGATGCTAAGGGCAACCCCGCTCCCCGTTATGCAGTTTACG
ACGTCGAGTACGACCTGGGCGGTGGTGAAGGCAAGAGCTCGCGTCTGGAT
GTCTTGGTCCATGATCTACGCCAGCACTCGCGAGAACCTGAAGAACGCCC
TCAACATCCACACCTCCATCCACGCCGACGACAAGTCCGACATCGAGTGG
AAGACCGTCCTGGCCGAGGCCAGCGGTGGTAAGGCTGGCAAATAAGAGCA
AGATCATCTTCATTTCCTGGGTTCCCAGCGACACCGCTACCCTCTGTTTC
CATCACCGATGAGTGCATCACCGCATTCAACGAGTTCCGCATGAGCGGCA
ACAGCAGGGGAAGCAAGACGAAGTTCATCATCTTTAAGATCGCCGACAAC
AAGAAGGAGGTTGTCATCGACGAGGTTTCCCAGGACGAGGACTACGAGGT
CTTCCGCGAAAAGCTCGCGGCCGCTAAGGATGCTAAGGGCAACCCCGCTC
CCCGTTATGCAGTTTACGACGTCGAGTACGACCTGGGCGGTGGTGAAGGC
AAGAGCTCGCGTCTGGATGTCTTGGTCCATGATCTACGCCAGCACTCGCG
AGAACCTGAAGAACGCCCTCAACATCCACACCTCCATCCACGCCGACGAC
AAGTCCGACATCGAGTGGAAGACCGTCCTGGCCGAGGCCAGCGGTGGTAA
GGCTGGCAAATAAGAGCAAGATCATCTTCATTTCCTGGGTTCCCAGCGAC
ACCGCTACCCTCTGTTTCCATCACCGATGAGTGCATCACCGCATTCAACG
AGTTCCGCATGAGCGGCAACAGCAGGGGAAGCAAGACGAAGTTCATCATC
TTTAAGATCGCCGACAACAAGAAGGAGGTTGTCATCGACGAGGTTTCCCA
GGACGAGGACTACGAGGTCTTCCGCGAAAAGCTCGCGGCCGCTAAGGATG
CTAAGGGCAACCCCGCTCCCCGTTATGCAGTTTACGACGTCGAGTACGAC
CTGGGCGGTGGTGAAGGCAAGAGCTCGCGTCTGGATGTCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015629actin cytoskeleton
Vocabulary: Biological Process
TermDefinition
GO:0030042actin filament depolymerization
Vocabulary: Molecular Function
TermDefinition
GO:0003779actin binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_291512M747DRAFT_291512Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291512-T1M747DRAFT_291512-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291512-T1.cdsM747DRAFT_291512-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291512-T1.utr3p1M747DRAFT_291512-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291512-T1.exon5M747DRAFT_291512-T1.exon5Aspergillus niger ATCC 13496exon
M747DRAFT_291512-T1.exon4M747DRAFT_291512-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_291512-T1.exon3M747DRAFT_291512-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_291512-T1.exon2M747DRAFT_291512-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_291512-T1.exon1M747DRAFT_291512-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291512-T1.utr5p1M747DRAFT_291512-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR017904
DBxrefInterPro:IPR029006
DBxrefInterPro:IPR002108
DBxrefPFAM:PF00241
Productactin depolymerizing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851899.1supercontigKZ851899.1:724351..725303 -
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