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M747DRAFT_291601-T1, M747DRAFT_291601-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_291601-T1
Unique NameM747DRAFT_291601-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851899.1:1085521..1086935+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_291601-T1 ID=M747DRAFT_291601-T1|Name=M747DRAFT_291601-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1415bp|location=Sequence derived from alignment at KZ851899.1:1085521..1086935+ (Aspergillus niger ATCC 13496)
TCTCTTTCATCTTCATTCCCTTCGTTGCTTTCCGCTTCATTGACTGAGGC
TTTCACACTCTTTGCGCTGCGCGCTCACTCTTTACAAACACTCTACATAC
ATTACTTTACATTCTCTACAAACTTTTCCTTCTCCAAAAACCACTCTAGC
AATCATGCGTCAAGCTCAGTCTGCTTCTCTCCTCGCGGCCCTTCTGTCGG
CCACCCAGGTCGCTGCCCACGGTCACGTCACTAACCTCGTCGTCGACGGT
GTCTACTACGAGGGCTTCGACATCAGCGTCTTCCCTTACGAGTCCGACCC
CCCGAAGGTCGCCGCCTGGACGACCCCCAACACCGGTAACGGCTTCATCT
CGCCCGACGAGTACCGCAACCCCAACATCATCTGTCACGAGAACGCCACC
AACGCCCAGGCCCACGTTGTCGTCGGTGCCGGTGAGAAGATCAACATCCA
GTGGACTGCCTGGCCCGACTCCCACCACGGTCCCGTCCTGGACTACCTGG
CTCGTTGTGACGGCAGCTGCGAGACCGTCGACAAAACCGACCTGGAGTTC
TTCAAGATCGACGGCGTCGGTCTCGTCAGCGACACCGAGGTCCCCGGTAC
CTGGGGTACCGACCAGCTGATCAACAACAACAACAGCTGGATGGTCGAGA
TCCCTCCCTCCATTGCCGCTGGTAACTACGTCCTCCGTCACGAGCTCATC
GCTCTCCACGGCGCTGAGGAGCAGGACGGCGCCCAGAACTACCCCCAGTG
CTTCAACCTCCAGGTCACCGGTACCGGTACCGCCACTCCCTCCGGTGTCA
AGGGTACCGAGCTCTACACTGCCACTGAGGGCGGTATCCTCGTCAACATC
TACTCCTCCCTGAGCACTTACACTATGCCCGGCCCTACTGCCTACAGCGG
CGATGTCTCCATCACTCAGACTACTTCCGCTGTCACTTCCACCGGCACCG
CCGTGGTTGGCAGTGCTAGCGCCGTCGCTTCCGCTTCCTCGACCGCTGCC
GCCGCTACCAGCGCTGCTGCCGTGACCAGCGTTGACACCAACACCCAGAT
CGCTCAGTCCAGCAGTGCCCCTGCCCCTGCTGCCCCTAGCTCCAGCTCCT
CCGCCTACACTCAGATCCCCGTGCAGGTCCCCTCTTCTTGGACTACCCTG
TTGACCTTCACCAACACTCCCCAGGCTGTGCAGCCTACTACCTCGGTCCA
GCCCGAGCCTGCTCAGTCGACTATCACCCCTGCTCCGGCTGTTAGCTCTG
CTGCCTCCGGTAGCTCCGGTAGTCAGTCTCTGTACGGCCAGTGCGGTGGT
ATCAACTGGACTGGTGCTACTCAGTGCGCGAGCGGATCTAGCTGCCACTC
GTACAACCCTTACTACTACCAGTGCATTGCTAGTGCTTAAGTAGTACTTT
AGCCTTATTTTACAG
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Coding sequence (CDS) from alignment at KZ851899.1:1085521..1086935+

>M747DRAFT_291601-T1 ID=M747DRAFT_291601-T1|Name=M747DRAFT_291601-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1236bp|location=Sequence derived from alignment at KZ851899.1:1085521..1086935+ (Aspergillus niger ATCC 13496)
ATGCGTCAAGCTCAGTCTGCTTCTCTCCTCGCGGCCCTTCTGTCGGCCAC
CCAGGTCGCTGCCCACGGTCACGTCACTAACCTCGTCGTCGACGGTGTCT
ACTACGAGGGCTTCGACATCAGCGTCTTCCCTTACGAGTCCGACCCCCCG
AAGGTCGCCGCCTGGACGACCCCCAACACCGGTAACGGCTTCATCTCGCC
CGACGAGTACCGCAACCCCAACATCATCTGTCACGAGAACGCCACCAACG
CCCAGGCCCACGTTGTCGTCGGTGCCGGTGAGAAGATCAACATCCAGTGG
ACTGCCTGGCCCGACTCCCACCACGGTCCCGTCCTGGACTACCTGGCTCG
TTGTGACGGCAGCTGCGAGACCGTCGACAAAACCGACCTGGAGTTCTTCA
AGATCGACGGCGTCGGTCTCGTCAGCGACACCGAGGTCCCCGGTACCTGG
GGTACCGACCAGCTGATCAACAACAACAACAGCTGGATGGTCGAGATCCC
TCCCTCCATTGCCGCTGGTAACTACGTCCTCCGTCACGAGCTCATCGCTC
TCCACGGCGCTGAGGAGCAGGACGGCGCCCAGAACTACCCCCAGTGCTTC
AACCTCCAGGTCACCGGTACCGGTACCGCCACTCCCTCCGGTGTCAAGGG
TACCGAGCTCTACACTGCCACTGAGGGCGGTATCCTCGTCAACATCTACT
CCTCCCTGAGCACTTACACTATGCCCGGCCCTACTGCCTACAGCGGCGAT
GTCTCCATCACTCAGACTACTTCCGCTGTCACTTCCACCGGCACCGCCGT
GGTTGGCAGTGCTAGCGCCGTCGCTTCCGCTTCCTCGACCGCTGCCGCCG
CTACCAGCGCTGCTGCCGTGACCAGCGTTGACACCAACACCCAGATCGCT
CAGTCCAGCAGTGCCCCTGCCCCTGCTGCCCCTAGCTCCAGCTCCTCCGC
CTACACTCAGATCCCCGTGCAGGTCCCCTCTTCTTGGACTACCCTGTTGA
CCTTCACCAACACTCCCCAGGCTGTGCAGCCTACTACCTCGGTCCAGCCC
GAGCCTGCTCAGTCGACTATCACCCCTGCTCCGGCTGTTAGCTCTGCTGC
CTCCGGTAGCTCCGGTAGTCAGTCTCTGTACGGCCAGTGCGGTGGTATCA
ACTGGACTGGTGCTACTCAGTGCGCGAGCGGATCTAGCTGCCACTCGTAC
AACCCTTACTACTACCAGTGCATTGCTAGTGCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0030248cellulose binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_291601M747DRAFT_291601Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291601-T1.utr5p1M747DRAFT_291601-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291601-T1.exon1M747DRAFT_291601-T1.exon1Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291601-T1.cdsM747DRAFT_291601-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291601-T1.utr3p1M747DRAFT_291601-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291601-T1M747DRAFT_291601-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-21)
NoteCAZy:AA9
DBxrefInterPro:IPR035971
DBxrefInterPro:IPR005103
DBxrefInterPro:IPR000254
DBxrefPFAM:PF03443
DBxrefPFAM:PF00734
Productfamily 61 glycosyl hydrolase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851899.1supercontigKZ851899.1:1085521..1086935 +
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