You are here

Home

M747DRAFT_291657-T1, M747DRAFT_291657-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_291657-T1
Unique NameM747DRAFT_291657-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851899.1:1269135..1272011-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_291657-T1 ID=M747DRAFT_291657-T1|Name=M747DRAFT_291657-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2877bp|location=Sequence derived from alignment at KZ851899.1:1269135..1272011- (Aspergillus niger ATCC 13496)
TCTTCATTCTAAAAAGGACAAACTCGCTAAGCGGGGCCGGTGTATTCAAT
GGGGGTGTCCTGAGCGACTTTTCCCACTCGGCTTGAAGGGAGAGTCGCCT
TTCTCGCTGAATGGTGAATCGCACACTGCGGAGACATTCCGTACCCTCTG
GTGTTGGATGCCTTTGATAGGCCAACAGAGACACTGAAATCCGATTCTCA
TCACTCTTACTTTGACAACACAGCCTTCTGTACCTGCATAACACCGGGTA
GCTTGAATAATGTCCGAAGGAAGGCGCAGCAACGAATCAAGCTCAAGCTC
CTTGATCAGTTATCACAGTGTCGAGAGACCGAATGCAGACTCCGACGCTG
AAAAAAGACATGATCTCACCCCCGACAGCGACTCATCACCAAGCGGTCCT
CGTACTCATCGAGTTCACTTCGGGGCGGATCGCAGGTTTGAATATGGGGA
CTGGGATACAGATGAACGAGTTCTCTCTCCCGGTACATCTCGCCTTCGAC
GCCGTTCGTCTACTCAAGCGTCAGTAGACATCACCGATTCATCCCACAGA
GGTCCACCATCTACTAGTACAAATGGCAGGGACGAAGAAAATGAGAAAAA
GCAGCAACACACGACGACGACTGAGAAAAGATCCAGACGTGAACGCCTGA
AAGCATTCAAAGATTCGATCAAAGAGAAAGCAGCGAACCTTGCTGCTCGT
CTCGGTCGTCCAGATGATATCAACGAAGACGACCTACAGCCCATCGACCA
TCGACGTCGCAACACTGAACCTGATCTGTATCTCAGAGAAGAAGATCAAA
ACCAAACCTGTAGTACCGAGGCGCATCGGATCGTTCGTGAACTAGCACAT
GAAGCATCCGGCCGTCGTCCGAGTGCCCGTAGGGACTCGGCTTTGCATCG
TGCTGCTGGGGTTTCTGCCCAAGATGATGATTCTGGAAATGAAGCGATAC
CTCGCCGAAGTTCTGGATCGGGAGGCGTTCTATCTCAACTGCTCAGACTT
AGCGGGGGCTGGGACCAATTCCAGAAAGGAGCGCGCGGGCTCCACCTAGC
CAGTGACACGTTCTACCCTTTCGGTGGAAGCACCCCAGGCACCACGACTC
CGCGAAAGGAGAAAGTACGATGGTACAAGAAGCATGGTAACGTTTCAGCA
TCAACCTTAGTCGGAGGTGGCAGTGCTAGCGGTGCAAGCACCCCTGTTAC
CGGTGAACTTTTAAGCGCTGCATCCAGACGACGTGACAAGAGCCGAAGGC
ATAGCATGAGACTCGAGGAGGAGATTCAGGTTACCTTACAGATTGCCGAG
ATCATTGCTCGACAGAGGTATATCATGCAACTGTGCAAGGCATTAATGAG
ATTTGGGGCTCCAACTCATCGCTTAGAGGAGTACATGCGCATGACAGCCA
GAGTTCTGGACGTTGACAGCCAGTTTCTCTATGTGCCCGGATGCATGATC
ATGTCTTTCGATGACTCCAGCACCCGGACCACCGAAGTCAAACTAGTCCG
CGTCGTTCAAGGCGTTGATCTGGGACGATTGGCAGATACCCACAACGTAT
ACAAGAACGTCATACACGACATGATAGGGATCGAAGAAGCCGGAAACGAA
TTGGAAGAGCTAATGGCAAAGAAGCCCCGCTTCAACCGATACTTCATCGT
TTTAATCTACGGCCTAGCCACTGCGATGGTAGGCCCATTCGCATTCGACG
CACGACCAATCGACATGCCAATAATCTTCTTCAACGGCTGTCTCCTAGGC
TGCATGCAGCACATCCTCGCACCACGATCAGTCCTATACTCCAATGTATT
CGAAGTGACCGCCGCCGTTCTCACTTCCTTCCTCGCCCGCGCCTTCGGCA
GTATCCGATCATCCGCATTCACCAACGGATCCAACGACTACATATTCTGC
TTCTCCGCAATCGCCCAGTCCTCCATCGCACTAATCCTCCCCGGCTACAC
CGTCCTCTGCAGCAGCCTGGAACTCCAATCCCAACAAATCGTTGCCGGTT
CCATCCGCATGGTCTACGCCATCATATACTCCCTCTTCCTCGGCTACGGC
GTCACAGTCGGCACGACCATCTACGGGCTCATCGACAAGAACGCAACCTC
AAACCTAAGCTGCCCGACAAGCGGAGGCTTCGGCAACGCCTACGCACAAC
GTTTCCCCTTCGTCGCCGCCTTCTCCCTCTGCCTCTTAATCGTCAACCAA
GGCAAATGGAAACAATCGCCCATCATGATCGCCATCTCCGTAGCCGGCTA
CGTTACCAACTACTTCGTCAGCTCGCGTCTAGGCAACAACTCCCAAGTAG
CCAACACCGTCGGGGCCTTCACTGTGGGAGTCATGGGCAACCTCTACAGT
CGACTCTGGCACGGACACGCTGCAGCAGCTATCTTACCCGCGATATTCGT
CCTCGTGCCCTCCGGTCTAGCTGCAACAGGAAACCTTATCACAGGCGTCG
ACACAGCCGATGAGATCAGATCAAATGTCACGAAAAATGCAACGGGAAGT
GGGACCACGTCTAGCTCGTCATCGAGCAACATGTCAACGAATATTCTGGG
GTTTGGAATGATCCAAGTTGCCATTGGGATTACTGTTGGGTTGTTTGTCG
CTGCCTTGGTTGTTTATCCTCTTGGAAAGCGGAGAAGCGGACTTTTCAGC
TTCTAAATGGAGTGGTTTCTTGAATCGCATTTAAATAATTTGCAGCGTAC
ATATTTGGTCGCCTCGAGTCTTTGCATGCATCTGGAGGGAAAACGGAATT
TGCATTAGAGCGGGCGAGATTTTAGTTTGAAGAAAAGCAGCGAGCGTCGA
AATTGGTTACAGCATCTCGCATGTCAGCCAGGTATTGTTACATATCTTTC
TAATAGAGCAACTGAACTAGAAGCCGA
back to top

Coding sequence (CDS) from alignment at KZ851899.1:1269135..1272011-

>M747DRAFT_291657-T1 ID=M747DRAFT_291657-T1|Name=M747DRAFT_291657-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2397bp|location=Sequence derived from alignment at KZ851899.1:1269135..1272011- (Aspergillus niger ATCC 13496)
ATGTCCGAAGGAAGGCGCAGCAACGAATCAAGCTCAAGCTCCTTGATCAG
TTATCACAGTGTCGAGAGACCGAATGCAGACTCCGACGCTGAAAAAAGAC
ATGATCTCACCCCCGACAGCGACTCATCACCAAGCGGTCCTCGTACTCAT
CGAGTTCACTTCGGGGCGGATCGCAGGTTTGAATATGGGGACTGGGATAC
AGATGAACGAGTTCTCTCTCCCGGTACATCTCGCCTTCGACGCCGTTCGT
CTACTCAAGCGTCAGTAGACATCACCGATTCATCCCACAGAGGTCCACCA
TCTACTAGTACAAATGGCAGGGACGAAGAAAATGAGAAAAAGCAGCAACA
CACGACGACGACTGAGAAAAGATCCAGACGTGAACGCCTGAAAGCATTCA
AAGATTCGATCAAAGAGAAAGCAGCGAACCTTGCTGCTCGTCTCGGTCGT
CCAGATGATATCAACGAAGACGACCTACAGCCCATCGACCATCGACGTCG
CAACACTGAACCTGATCTGTATCTCAGAGAAGAAGATCAAAACCAAACCT
GTAGTACCGAGGCGCATCGGATCGTTCGTGAACTAGCACATGAAGCATCC
GGCCGTCGTCCGAGTGCCCGTAGGGACTCGGCTTTGCATCGTGCTGCTGG
GGTTTCTGCCCAAGATGATGATTCTGGAAATGAAGCGATACCTCGCCGAA
GTTCTGGATCGGGAGGCGTTCTATCTCAACTGCTCAGACTTAGCGGGGGC
TGGGACCAATTCCAGAAAGGAGCGCGCGGGCTCCACCTAGCCAGTGACAC
GTTCTACCCTTTCGGTGGAAGCACCCCAGGCACCACGACTCCGCGAAAGG
AGAAAGTACGATGGTACAAGAAGCATGGTAACGTTTCAGCATCAACCTTA
GTCGGAGGTGGCAGTGCTAGCGGTGCAAGCACCCCTGTTACCGGTGAACT
TTTAAGCGCTGCATCCAGACGACGTGACAAGAGCCGAAGGCATAGCATGA
GACTCGAGGAGGAGATTCAGGTTACCTTACAGATTGCCGAGATCATTGCT
CGACAGAGGTATATCATGCAACTGTGCAAGGCATTAATGAGATTTGGGGC
TCCAACTCATCGCTTAGAGGAGTACATGCGCATGACAGCCAGAGTTCTGG
ACGTTGACAGCCAGTTTCTCTATGTGCCCGGATGCATGATCATGTCTTTC
GATGACTCCAGCACCCGGACCACCGAAGTCAAACTAGTCCGCGTCGTTCA
AGGCGTTGATCTGGGACGATTGGCAGATACCCACAACGTATACAAGAACG
TCATACACGACATGATAGGGATCGAAGAAGCCGGAAACGAATTGGAAGAG
CTAATGGCAAAGAAGCCCCGCTTCAACCGATACTTCATCGTTTTAATCTA
CGGCCTAGCCACTGCGATGGTAGGCCCATTCGCATTCGACGCACGACCAA
TCGACATGCCAATAATCTTCTTCAACGGCTGTCTCCTAGGCTGCATGCAG
CACATCCTCGCACCACGATCAGTCCTATACTCCAATGTATTCGAAGTGAC
CGCCGCCGTTCTCACTTCCTTCCTCGCCCGCGCCTTCGGCAGTATCCGAT
CATCCGCATTCACCAACGGATCCAACGACTACATATTCTGCTTCTCCGCA
ATCGCCCAGTCCTCCATCGCACTAATCCTCCCCGGCTACACCGTCCTCTG
CAGCAGCCTGGAACTCCAATCCCAACAAATCGTTGCCGGTTCCATCCGCA
TGGTCTACGCCATCATATACTCCCTCTTCCTCGGCTACGGCGTCACAGTC
GGCACGACCATCTACGGGCTCATCGACAAGAACGCAACCTCAAACCTAAG
CTGCCCGACAAGCGGAGGCTTCGGCAACGCCTACGCACAACGTTTCCCCT
TCGTCGCCGCCTTCTCCCTCTGCCTCTTAATCGTCAACCAAGGCAAATGG
AAACAATCGCCCATCATGATCGCCATCTCCGTAGCCGGCTACGTTACCAA
CTACTTCGTCAGCTCGCGTCTAGGCAACAACTCCCAAGTAGCCAACACCG
TCGGGGCCTTCACTGTGGGAGTCATGGGCAACCTCTACAGTCGACTCTGG
CACGGACACGCTGCAGCAGCTATCTTACCCGCGATATTCGTCCTCGTGCC
CTCCGGTCTAGCTGCAACAGGAAACCTTATCACAGGCGTCGACACAGCCG
ATGAGATCAGATCAAATGTCACGAAAAATGCAACGGGAAGTGGGACCACG
TCTAGCTCGTCATCGAGCAACATGTCAACGAATATTCTGGGGTTTGGAAT
GATCCAAGTTGCCATTGGGATTACTGTTGGGTTGTTTGTCGCTGCCTTGG
TTGTTTATCCTCTTGGAAAGCGGAGAAGCGGACTTTTCAGCTTCTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_291657M747DRAFT_291657Aspergillus niger ATCC 13496gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291657-T1.cdsM747DRAFT_291657-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291657-T1.utr3p1M747DRAFT_291657-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291657-T1.exon1M747DRAFT_291657-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291657-T1.utr5p1M747DRAFT_291657-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291657-T1M747DRAFT_291657-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_8518991.4
NoteantiSMASH:Cluster_8518991.5
NoteEggNog:ENOG41
DBxrefInterPro:IPR024528
DBxrefInterPro:IPR010619
DBxrefPFAM:PF12821
DBxrefPFAM:PF06738
ProductDUF1212 domain membrane protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851899.1supercontigKZ851899.1:1269135..1272011 -
Powered by Drupal