You are here

Home

M747DRAFT_291895-T1, M747DRAFT_291895-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_291895-T1
Unique NameM747DRAFT_291895-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851900.1:413563..415018-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_291895-T1 ID=M747DRAFT_291895-T1|Name=M747DRAFT_291895-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1456bp|location=Sequence derived from alignment at KZ851900.1:413563..415018- (Aspergillus niger ATCC 13496)
GTTCAACCTCTCACGCCTCCAATCTTCACCATACTCTATTATCCACCGTC
ACCATCTTTCACATCCTCTTCTTCCAAAATGTTTCAGAGAACCTTCCTCA
GACAGGCCCAGCGGTCTCTCCGCTCTGTGCGCCCTACCTCCATCAACACC
TCCGCCTTCCGTCGCACGCCGCAGCTCCCCCAGTCTGTCCGCGCGATTGC
TCCTCAGTCTGCCTACCGGTTTTACTCTACCGAGAACAAGGCTGAGAACG
GCGAGAAGAAGGAAGGTGAAGCTGCCCAGGAGGCTGAGGACCCTGTCCGC
AAGGAGCTTGAAGAGAAGAAGAAGGAGGTCGTTGAGCTGAAGGTAAACCT
TCCCATCTCAACAGGAGCGCCCGGCTCAACATTTACTACGCCAACCACGG
TGGTAAATGGTACCTTGCAGATTGTCTAACTCTTTGAATAGGATAAGCTC
CTTCGCTCGAAGGCCGACTTCCTCAACCTGCAGGAGCGCACCAAGCGTGA
CATGGAGAACTCTCGTAACTTCGCTATTCAGCGCTTTGCTGGCGACCTTC
TCGAGTCCATTGACAACTTCGACCGTGCCCTCCTTGCTGTGCCCAAGGAC
AAGCTTGATGCTCCTCAGACTGAGGAAAACAAGGACCTGTTGGAGCTCGT
CTCCGGTCTGAAGATGACTCAGAACGTCCTTCTGAACACCTTGAAGAAGC
ACGGTCTTGAGCGCTTTGACCCTAGCGAGCCCACTGAGGAGGGCAAGACC
CAGAAGTTCGACCCCAACCTTCACGAGGCCACCTTCATGGCCAAGGTTGA
GGGCAAGGAAGATGGTGACATCATGTACACCCAGAGCACCGGTTTCCGCC
TTAACGGCCGCGTTCTTCGCGTAAGTGATTGATATAATGACCTGTATACG
TCGTAAAACATGCTAACTCATCTTTCTATAGGCTGCCAAGGTCGGTGTCG
TTAAGAACTAGACACTTCGCGAACCCTTTTAACCATTTTCTCCCCCTTTC
CGCCACCCTGTCTTATCTTCTTGTTGTATAATATACCAAATACGTCTTCG
CTATGATGGGGATCGACTTACGTTAATCCGACAGGCTGGAACATCTGGAA
TTGATCCAGGTCTCTGTTGCTTTGTCCATGAACGCATGTGTGTATGATAC
ACCTTACCTGTGTTGTATGGTCTTGGTGTTCTTGTATCTTTCTGTTTATT
GGCGTTGTTTCTGAACTCTCTCCTCCCTACTTTGTATATTATATCCCTGG
CTGGTGTCTTTGTTCCTTTACTTCTCTCATGAAAAAGTGGGATTGTGTTG
TTGGGATTGGCATTGGCACGGATGTGGATGACATTTGCATGGCATTGGAT
CATGTTGACTTTTATTGCATCACTTTGCTTGCCCAGTAGGCAATGCAAGG
TGTTTTGATCTAAACGACTAATAGAAAGTCTCGATCATAACGATTGATGA
ACCTAC
back to top

Coding sequence (CDS) from alignment at KZ851900.1:413563..415018-

>M747DRAFT_291895-T1 ID=M747DRAFT_291895-T1|Name=M747DRAFT_291895-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2169bp|location=Sequence derived from alignment at KZ851900.1:413563..415018- (Aspergillus niger ATCC 13496)
GCTGCCAAGGTCGGTGTCGTTAAGAACTAGGATAAGCTCCTTCGCTCGAA
GGCCGACTTCCTCAACCTGCAGGAGCGCACCAAGCGTGACATGGAGAACT
CTCGTAACTTCGCTATTCAGCGCTTTGCTGGCGACCTTCTCGAGTCCATT
GACAACTTCGACCGTGCCCTCCTTGCTGTGCCCAAGGACAAGCTTGATGC
TCCTCAGACTGAGGAAAACAAGGACCTGTTGGAGCTCGTCTCCGGTCTGA
AGATGACTCAGAACGTCCTTCTGAACACCTTGAAGAAGCACGGTCTTGAG
CGCTTTGACCCTAGCGAGCCCACTGAGGAGGGCAAGACCCAGAAGTTCGA
CCCCAACCTTCACGAGGCCACCTTCATGGCCAAGGTTGAGGGCAAGGAAG
ATGGTGACATCATGTACACCCAGAGCACCGGTTTCCGCCTTAACGGCCGC
GTTCTTCGCATGTTTCAGAGAACCTTCCTCAGACAGGCCCAGCGGTCTCT
CCGCTCTGTGCGCCCTACCTCCATCAACACCTCCGCCTTCCGTCGCACGC
CGCAGCTCCCCCAGTCTGTCCGCGCGATTGCTCCTCAGTCTGCCTACCGG
TTTTACTCTACCGAGAACAAGGCTGAGAACGGCGAGAAGAAGGAAGGTGA
AGCTGCCCAGGAGGCTGAGGACCCTGTCCGCAAGGAGCTTGAAGAGAAGA
AGAAGGAGGTCGTTGAGCTGAAGGCTGCCAAGGTCGGTGTCGTTAAGAAC
TAGGATAAGCTCCTTCGCTCGAAGGCCGACTTCCTCAACCTGCAGGAGCG
CACCAAGCGTGACATGGAGAACTCTCGTAACTTCGCTATTCAGCGCTTTG
CTGGCGACCTTCTCGAGTCCATTGACAACTTCGACCGTGCCCTCCTTGCT
GTGCCCAAGGACAAGCTTGATGCTCCTCAGACTGAGGAAAACAAGGACCT
GTTGGAGCTCGTCTCCGGTCTGAAGATGACTCAGAACGTCCTTCTGAACA
CCTTGAAGAAGCACGGTCTTGAGCGCTTTGACCCTAGCGAGCCCACTGAG
GAGGGCAAGACCCAGAAGTTCGACCCCAACCTTCACGAGGCCACCTTCAT
GGCCAAGGTTGAGGGCAAGGAAGATGGTGACATCATGTACACCCAGAGCA
CCGGTTTCCGCCTTAACGGCCGCGTTCTTCGCATGTTTCAGAGAACCTTC
CTCAGACAGGCCCAGCGGTCTCTCCGCTCTGTGCGCCCTACCTCCATCAA
CACCTCCGCCTTCCGTCGCACGCCGCAGCTCCCCCAGTCTGTCCGCGCGA
TTGCTCCTCAGTCTGCCTACCGGTTTTACTCTACCGAGAACAAGGCTGAG
AACGGCGAGAAGAAGGAAGGTGAAGCTGCCCAGGAGGCTGAGGACCCTGT
CCGCAAGGAGCTTGAAGAGAAGAAGAAGGAGGTCGTTGAGCTGAAGGCTG
CCAAGGTCGGTGTCGTTAAGAACTAGGATAAGCTCCTTCGCTCGAAGGCC
GACTTCCTCAACCTGCAGGAGCGCACCAAGCGTGACATGGAGAACTCTCG
TAACTTCGCTATTCAGCGCTTTGCTGGCGACCTTCTCGAGTCCATTGACA
ACTTCGACCGTGCCCTCCTTGCTGTGCCCAAGGACAAGCTTGATGCTCCT
CAGACTGAGGAAAACAAGGACCTGTTGGAGCTCGTCTCCGGTCTGAAGAT
GACTCAGAACGTCCTTCTGAACACCTTGAAGAAGCACGGTCTTGAGCGCT
TTGACCCTAGCGAGCCCACTGAGGAGGGCAAGACCCAGAAGTTCGACCCC
AACCTTCACGAGGCCACCTTCATGGCCAAGGTTGAGGGCAAGGAAGATGG
TGACATCATGTACACCCAGAGCACCGGTTTCCGCCTTAACGGCCGCGTTC
TTCGCATGTTTCAGAGAACCTTCCTCAGACAGGCCCAGCGGTCTCTCCGC
TCTGTGCGCCCTACCTCCATCAACACCTCCGCCTTCCGTCGCACGCCGCA
GCTCCCCCAGTCTGTCCGCGCGATTGCTCCTCAGTCTGCCTACCGGTTTT
ACTCTACCGAGAACAAGGCTGAGAACGGCGAGAAGAAGGAAGGTGAAGCT
GCCCAGGAGGCTGAGGACCCTGTCCGCAAGGAGCTTGAAGAGAAGAAGAA
GGAGGTCGTTGAGCTGAAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0051087chaperone binding
GO:0000774adenyl-nucleotide exchange factor activity
GO:0042803protein homodimerization activity
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_291895M747DRAFT_291895Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291895-T1M747DRAFT_291895-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291895-T1.cdsM747DRAFT_291895-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291895-T1.utr3p1M747DRAFT_291895-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291895-T1.exon3M747DRAFT_291895-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_291895-T1.exon2M747DRAFT_291895-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_291895-T1.exon1M747DRAFT_291895-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291895-T1.utr5p1M747DRAFT_291895-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264IDN
DBxrefInterPro:IPR009012
DBxrefInterPro:IPR013805
DBxrefInterPro:IPR000740
DBxrefPFAM:PF01025
ProductGrpE-domain-containing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851900.1supercontigKZ851900.1:413563..415018 -
Powered by Drupal