You are here

Home

M747DRAFT_291923-T1, M747DRAFT_291923-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_291923-T1
Unique NameM747DRAFT_291923-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851900.1:506746..507602+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_291923-T1 ID=M747DRAFT_291923-T1|Name=M747DRAFT_291923-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=857bp|location=Sequence derived from alignment at KZ851900.1:506746..507602+ (Aspergillus niger ATCC 13496)
TGCTATCAGAACTACAAGGTAGATATCTAACACACTACGTATATAGCCCT
GAATCTACCGTCATAATGCTTCTCGACGAGAATCCCGCTGGTGTATGTTA
CTTTTGCCCCTTCATCATGCCCCACTGCTGACTCTCCAGCTCATCAACCA
CACCATCGGCAACTTCAACATCCACCCCGATAAACAAGCCGTCACTCGCA
TCAATGACTCGCTCGCCGCACTACAACAATCGCGCGAATTGCGTACACGC
GAAGCCGAATCGGCCCTGCGCAAGCTCTCGCGGCACCTGTCCGCGCTGAC
GGCCCAGCATGAGGAGGCCGTGACGGCGCATGACTCTGGCAAGCACGCGG
CGGAGATGGTCGAGCTGGACACGAAGAAATTCCGGATTGCCAAGTCGGCT
ACCGAGCTGGAGATTGAAAGCGAGCGCTTAGAAGGCGAGCTGGAGATGCT
GAAGGAGCGACTGGCCGATCTGGAGGCGCAGGGGTTGGAGGGCGATGAAC
CGACGCGCCGCGAGCGCGAGATGGATGATGCGACGCTGTGAGTACTTCTC
ATTTGTTTGACTTGTAGTACCCGGAGGCTGACTATTTGGTAGGCTGCGAT
TGAAAATCTACCGGTCCTTGGGCGTGGATATCGAGGCGGACGATGCAGGC
AACTTCACCAAGGCGGTGATCCGCAATAGTCGCAAGGGCGATGTGCATGT
GGTGAACATTGACCCGAAGTTCTCGCGGTTCTTCTATTCGAACTACTTCT
GGTCGACGATGCAGGGGTAGATGTGTTTGATGAGATGGATGGTTCGGATG
GCGTTTACGGATATACCCTGGCTTGATATGACAATACTATACTATTATTA
CATTCTA
back to top

Coding sequence (CDS) from alignment at KZ851900.1:506746..507602+

>M747DRAFT_291923-T1 ID=M747DRAFT_291923-T1|Name=M747DRAFT_291923-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1809bp|location=Sequence derived from alignment at KZ851900.1:506746..507602+ (Aspergillus niger ATCC 13496)
ATGCTTCTCGACGAGAATCCCGCTGGTCTCATCAACCACACCATCGGCAA
CTTCAACATCCACCCCGATAAACAAGCCGTCACTCGCATCAATGACTCGC
TCGCCGCACTACAACAATCGCGCGAATTGCGTACACGCGAAGCCGAATCG
GCCCTGCGCAAGCTCTCGCGGCACCTGTCCGCGCTGACGGCCCAGCATGA
GGAGGCCGTGACGGCGCATGACTCTGGCAAGCACGCGGCGGAGATGGTCG
AGCTGGACACGAAGAAATTCCGGATTGCCAAGTCGGCTACCGAGCTGGAG
ATTGAAAGCGAGCGCTTAGAAGGCGAGCTGGAGATGCTGAAGGAGCGACT
GGCCGATCTGGAGGCGCAGGGGTTGGAGGGCGATGAACCGACGCGCCGCG
AGCGCGAGATGGATGATGCGACGCTGCTGCGATTGAAAATCTACCGGTCC
TTGGGCGTGGATATCGAGGCGGACGATGCAGGCAACTTCACCAAGGCGGT
GATCCGCAATAGTCGCAAGGGCGATGTGCATGTGGTGAACATTGACCCGA
AGTTCTCGCGGTTCTTCTATTCGAACTACTTCTGGTCGACGATGCAGGGG
TAGATGCTTCTCGACGAGAATCCCGCTGGTCTCATCAACCACACCATCGG
CAACTTCAACATCCACCCCGATAAACAAGCCGTCACTCGCATCAATGACT
CGCTCGCCGCACTACAACAATCGCGCGAATTGCGTACACGCGAAGCCGAA
TCGGCCCTGCGCAAGCTCTCGCGGCACCTGTCCGCGCTGACGGCCCAGCA
TGAGGAGGCCGTGACGGCGCATGACTCTGGCAAGCACGCGGCGGAGATGG
TCGAGCTGGACACGAAGAAATTCCGGATTGCCAAGTCGGCTACCGAGCTG
GAGATTGAAAGCGAGCGCTTAGAAGGCGAGCTGGAGATGCTGAAGGAGCG
ACTGGCCGATCTGGAGGCGCAGGGGTTGGAGGGCGATGAACCGACGCGCC
GCGAGCGCGAGATGGATGATGCGACGCTGCTGCGATTGAAAATCTACCGG
TCCTTGGGCGTGGATATCGAGGCGGACGATGCAGGCAACTTCACCAAGGC
GGTGATCCGCAATAGTCGCAAGGGCGATGTGCATGTGGTGAACATTGACC
CGAAGTTCTCGCGGTTCTTCTATTCGAACTACTTCTGGTCGACGATGCAG
GGGTAGATGCTTCTCGACGAGAATCCCGCTGGTCTCATCAACCACACCAT
CGGCAACTTCAACATCCACCCCGATAAACAAGCCGTCACTCGCATCAATG
ACTCGCTCGCCGCACTACAACAATCGCGCGAATTGCGTACACGCGAAGCC
GAATCGGCCCTGCGCAAGCTCTCGCGGCACCTGTCCGCGCTGACGGCCCA
GCATGAGGAGGCCGTGACGGCGCATGACTCTGGCAAGCACGCGGCGGAGA
TGGTCGAGCTGGACACGAAGAAATTCCGGATTGCCAAGTCGGCTACCGAG
CTGGAGATTGAAAGCGAGCGCTTAGAAGGCGAGCTGGAGATGCTGAAGGA
GCGACTGGCCGATCTGGAGGCGCAGGGGTTGGAGGGCGATGAACCGACGC
GCCGCGAGCGCGAGATGGATGATGCGACGCTGCTGCGATTGAAAATCTAC
CGGTCCTTGGGCGTGGATATCGAGGCGGACGATGCAGGCAACTTCACCAA
GGCGGTGATCCGCAATAGTCGCAAGGGCGATGTGCATGTGGTGAACATTG
ACCCGAAGTTCTCGCGGTTCTTCTATTCGAACTACTTCTGGTCGACGATG
CAGGGGTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SPC24M747DRAFT_291923Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291923-T1M747DRAFT_291923-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291923-T1.utr5p1M747DRAFT_291923-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291923-T1.exon1M747DRAFT_291923-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_291923-T1.exon2M747DRAFT_291923-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_291923-T1.exon3M747DRAFT_291923-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291923-T1.cdsM747DRAFT_291923-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291923-T1.utr3p1M747DRAFT_291923-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR038066
DBxrefInterPro:IPR013252
DBxrefPFAM:PF08286
Productkinetochore-associated Ndc80 complex subunit spc24
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851900.1supercontigKZ851900.1:506746..507602 +
Powered by Drupal