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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851900.1:603530..605905+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_291947-T1 ID=M747DRAFT_291947-T1|Name=M747DRAFT_291947-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2376bp|location=Sequence derived from alignment at KZ851900.1:603530..605905+ (Aspergillus niger ATCC 13496)
TCCCTCGCTCCAGTCCCGTCTCCTCGTGGTCTTGTTGGACGCCCCCGGTT
TCTTTTAACCTCATAAAAAAAAACTTGTTTTTTTCTTCCTTCACATAACA
TCATTATGTCTTCCTACGGCGGCGGCGGCGGCTACCAGCGCGACTCCTAC
CGGTAAGCTATCCCTTTGCAATCAGAGCACTGGTCTAGATGGATTGCTGG
AGCGCAAACCAGCCTTGTGGCTGTGCGACATGAATCGCGACTCTGATCGC
TTCCTGGCTATTCCAGCCTGCCTTGCGGTCCGGTCTGTCACGCGATCCGG
TCAACCTTCAACCCATCTAGTCCTATCGGCTCTTCTCAACACTGCGTCGT
GAATCTGTACCTCTCAAACGAACATGCTTGCTAACTTGCCATATAGCTCC
AGAAACGGTGGCGGCGGCGGCGGCTACGGTAACGGTAACGGTTACTCCAA
CGGCGGAGGCTACGGTGGTGGTGGTGGTGGTGGTGGTTACGGCGGTGGTG
GCTATGGCGGCGGCGGCTACGGCGGCGGCGGCTATGGTGGCAGAGGTGGT
GGTGCCGGCGGTGCTGGCGGAGACCGCATGTCCAACCTGGGCGCCGGTCT
GAAGAAGCAGGAATGGGATCTTGACTCCCTGCCCAAGTTCGAGAAGTCCT
TCTACAAGGAACACGCCGATGTCGCCGAGCGCTCTCAGCGTGATGTTGAC
GAGTTCCGTAAGAAGCACGAGATGGCTGTTCAGGGAAGAAACGTCCCTCG
CCCTGTCGAGACCTTCGACGAGGCCGGTTTCCCTCAATACGTTCTCAGCG
AGGTCAAGGCCCAGGGCTTCGACCGCCCTACCGCTATTCAGTCTCAGGGT
TGGCCCATGGCCCTCTCTGGTCGCGACGTTGTCGGTATCGCTGAGACGGG
TTCCGGAAAGACCCTGACCTACTGTCTTCCTGCCATTGTTCACATCAACG
CCCAGCCCCTCCTCGCCCCCGGTGACGGCCCCATTGTCCTTATCCTCGCC
CCCACCCGTGAATTGGCCGTTCAGATTCAAGCCGAAATCTCCAAGTTCGG
AAAGTCTTCCCGTATCCGCAACACCTGTGTCTACGGTGGTGTCCCCAAGG
GTCCTCAGATCCGTGACCTGAGCCGTGGTGTGGAAGTCTGCATTGCGACT
CCCGGTCGTCTGATTGACATGCTCGAGGCTGGTCGCACCAACCTTCGTCG
TGTCACCTACCTCGTTCTGGATGAGGCCGATCGCATGCTGGACATGGGTT
TCGAGCCCCAGATCCGCAAGATCATCTCCCAGATTCGCCCTGACCGTCAG
ACCTGCATGTGGTCCGCTACATGGCCCAAGGAGGTCCGTCAGCTTGCGTC
TGACTTCCTCAACGACTACATCCAGGTTAACATTGGTTCCATGGATCTGT
CGGCCAACCACCGTATCACTCAGATCGTCGAGGTCGTCTCGGACTTCGAG
AAGCGCGACAAGATGATCAAGCACCTCGAGAAGATCATGGAGAACCGTGC
CAACAAGTGCCTTATCTTCACCGGCACCAAGCGCATCGCTGACGAAATCA
CTCGCTTCCTCCGCCAGGACGGATGGCCGGCACTTTGTAAGCTTCCTTGG
ATCCCAATACTGAAACAGCTATTTGCTAACCTGCGTTCCAGCTATTCACG
GTGATAAGCAACAGCAAGAAAGAGATTGGGTCTTGAACGAGTTCAAGACG
GGCAAGAGCCCAATCATGGTGGCTACTGATGTGGCTTCCCGTGGTATCGG
TATGAATAAATCGCAAACTCCCCCCTCCCCTTCCCCCCCTTCCTCCCTTC
CTTTCTTGCCTCCCGAGTCACCCTCACCCATATTGAGGTTGTGTGACCAT
GGCACGGTGCTTAACTCTCTTCCACCAATTGTTGGTGTGTATGACTCTTC
CAGGCTTTGTCGGGTCTCCTGAAATGGTTCTCAAGCCAGGAGAGCCTTGG
ACTCACAGTGCAGTGTAGCAGACGTATTACTCTTCTGTTTTGATTCACCA
TATCTACCTTTTGAAACTTGGCCGGTAGAGGGAGGGAAAGCTCCTCTCTT
ACCGACTTGTTGAAGCTGCATTCCAAGGTTGCTCTAGGACCACGATATCT
GCCACCCTCGGACTCGTCTGTCACGGATCTTTTGATGATTTAAGTCCGAG
CGAGAGAGAGAGATGCATCAAGTCTCACGACTGAGAAAGGGCTCCTAAGC
CACGTTGCTCATTTGACTAATGCTCTGTATGCTAACGTTACATGTGTTTG
AAGATGTGCGCGACATCACACACGTTCTCAACTATGACTACCCCAACAAC
TCGGAGGACTACGTTCACCGTATTGGTAGAACTGGTCGTGCCGGTGCTAA
GGGTACCGCCATCACCTTCTTTACCA back to topCoding sequence (CDS) from alignment at KZ851900.1:603530..605905+ >M747DRAFT_291947-T1 ID=M747DRAFT_291947-T1|Name=M747DRAFT_291947-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4554bp|location=Sequence derived from alignment at KZ851900.1:603530..605905+ (Aspergillus niger ATCC 13496)
ATGTCTTCCTACGGCGGCGGCGGCGGCTACCAGCGCGACTCCTACCGCTC
CAGAAACGGTGGCGGCGGCGGCGGCTACGGTAACGGTAACGGTTACTCCA
ACGGCGGAGGCTACGGTGGTGGTGGTGGTGGTGGTGGTTACGGCGGTGGT
GGCTATGGCGGCGGCGGCTACGGCGGCGGCGGCTATGGTGGCAGAGGTGG
TGGTGCCGGCGGTGCTGGCGGAGACCGCATGTCCAACCTGGGCGCCGGTC
TGAAGAAGCAGGAATGGGATCTTGACTCCCTGCCCAAGTTCGAGAAGTCC
TTCTACAAGGAACACGCCGATGTCGCCGAGCGCTCTCAGCGTGATGTTGA
CGAGTTCCGTAAGAAGCACGAGATGGCTGTTCAGGGAAGAAACGTCCCTC
GCCCTGTCGAGACCTTCGACGAGGCCGGTTTCCCTCAATACGTTCTCAGC
GAGGTCAAGGCCCAGGGCTTCGACCGCCCTACCGCTATTCAGTCTCAGGG
TTGGCCCATGGCCCTCTCTGGTCGCGACGTTGTCGGTATCGCTGAGACGG
GTTCCGGAAAGACCCTGACCTACTGTCTTCCTGCCATTGTTCACATCAAC
GCCCAGCCCCTCCTCGCCCCCGGTGACGGCCCCATTGTCCTTATCCTCGC
CCCCACCCGTGAATTGGCCGTTCAGATTCAAGCCGAAATCTCCAAGTTCG
GAAAGTCTTCCCGTATCCGCAACACCTGTGTCTACGGTGGTGTCCCCAAG
GGTCCTCAGATCCGTGACCTGAGCCGTGGTGTGGAAGTCTGCATTGCGAC
TCCCGGTCGTCTGATTGACATGCTCGAGGCTGGTCGCACCAACCTTCGTC
GTGTCACCTACCTCGTTCTGGATGAGGCCGATCGCATGCTGGACATGGGT
TTCGAGCCCCAGATCCGCAAGATCATCTCCCAGATTCGCCCTGACCGTCA
GACCTGCATGTGGTCCGCTACATGGCCCAAGGAGGTCCGTCAGCTTGCGT
CTGACTTCCTCAACGACTACATCCAGGTTAACATTGGTTCCATGGATCTG
TCGGCCAACCACCGTATCACTCAGATCGTCGAGGTCGTCTCGGACTTCGA
GAAGCGCGACAAGATGATCAAGCACCTCGAGAAGATCATGGAGAACCGTG
CCAACAAGTGCCTTATCTTCACCGGCACCAAGCGCATCGCTGACGAAATC
ACTCGCTTCCTCCGCCAGGACGGATGGCCGGCACTTTCTATTCACGGTGA
TAAGCAACAGCAAGAAAGAGATTGGGTCTTGAACGAGTTCAAGACGGGCA
AGAGCCCAATCATGGTGGCTACTGATGTGGCTTCCCGTGGTATCGGTATG
AATAAATCGCAAACTCCCCCCTCCCCTTCCCCCCCTTCCTCCCTTCCTTT
CTTGCCTCCCGAGTCACCCTCACCCATATTGAGGTTGTGTGACCATGGCA
CGGTGCTTAACTCTCTTCCACCAATTGTTGGTGTGTATGACTCTTCCAGG
CTTTGTCGGGTCTCCTGAATGTCTTCCTACGGCGGCGGCGGCGGCTACCA
GCGCGACTCCTACCGCTCCAGAAACGGTGGCGGCGGCGGCGGCTACGGTA
ACGGTAACGGTTACTCCAACGGCGGAGGCTACGGTGGTGGTGGTGGTGGT
GGTGGTTACGGCGGTGGTGGCTATGGCGGCGGCGGCTACGGCGGCGGCGG
CTATGGTGGCAGAGGTGGTGGTGCCGGCGGTGCTGGCGGAGACCGCATGT
CCAACCTGGGCGCCGGTCTGAAGAAGCAGGAATGGGATCTTGACTCCCTG
CCCAAGTTCGAGAAGTCCTTCTACAAGGAACACGCCGATGTCGCCGAGCG
CTCTCAGCGTGATGTTGACGAGTTCCGTAAGAAGCACGAGATGGCTGTTC
AGGGAAGAAACGTCCCTCGCCCTGTCGAGACCTTCGACGAGGCCGGTTTC
CCTCAATACGTTCTCAGCGAGGTCAAGGCCCAGGGCTTCGACCGCCCTAC
CGCTATTCAGTCTCAGGGTTGGCCCATGGCCCTCTCTGGTCGCGACGTTG
TCGGTATCGCTGAGACGGGTTCCGGAAAGACCCTGACCTACTGTCTTCCT
GCCATTGTTCACATCAACGCCCAGCCCCTCCTCGCCCCCGGTGACGGCCC
CATTGTCCTTATCCTCGCCCCCACCCGTGAATTGGCCGTTCAGATTCAAG
CCGAAATCTCCAAGTTCGGAAAGTCTTCCCGTATCCGCAACACCTGTGTC
TACGGTGGTGTCCCCAAGGGTCCTCAGATCCGTGACCTGAGCCGTGGTGT
GGAAGTCTGCATTGCGACTCCCGGTCGTCTGATTGACATGCTCGAGGCTG
GTCGCACCAACCTTCGTCGTGTCACCTACCTCGTTCTGGATGAGGCCGAT
CGCATGCTGGACATGGGTTTCGAGCCCCAGATCCGCAAGATCATCTCCCA
GATTCGCCCTGACCGTCAGACCTGCATGTGGTCCGCTACATGGCCCAAGG
AGGTCCGTCAGCTTGCGTCTGACTTCCTCAACGACTACATCCAGGTTAAC
ATTGGTTCCATGGATCTGTCGGCCAACCACCGTATCACTCAGATCGTCGA
GGTCGTCTCGGACTTCGAGAAGCGCGACAAGATGATCAAGCACCTCGAGA
AGATCATGGAGAACCGTGCCAACAAGTGCCTTATCTTCACCGGCACCAAG
CGCATCGCTGACGAAATCACTCGCTTCCTCCGCCAGGACGGATGGCCGGC
ACTTTCTATTCACGGTGATAAGCAACAGCAAGAAAGAGATTGGGTCTTGA
ACGAGTTCAAGACGGGCAAGAGCCCAATCATGGTGGCTACTGATGTGGCT
TCCCGTGGTATCGGTATGAATAAATCGCAAACTCCCCCCTCCCCTTCCCC
CCCTTCCTCCCTTCCTTTCTTGCCTCCCGAGTCACCCTCACCCATATTGA
GGTTGTGTGACCATGGCACGGTGCTTAACTCTCTTCCACCAATTGTTGGT
GTGTATGACTCTTCCAGGCTTTGTCGGGTCTCCTGAATGTCTTCCTACGG
CGGCGGCGGCGGCTACCAGCGCGACTCCTACCGCTCCAGAAACGGTGGCG
GCGGCGGCGGCTACGGTAACGGTAACGGTTACTCCAACGGCGGAGGCTAC
GGTGGTGGTGGTGGTGGTGGTGGTTACGGCGGTGGTGGCTATGGCGGCGG
CGGCTACGGCGGCGGCGGCTATGGTGGCAGAGGTGGTGGTGCCGGCGGTG
CTGGCGGAGACCGCATGTCCAACCTGGGCGCCGGTCTGAAGAAGCAGGAA
TGGGATCTTGACTCCCTGCCCAAGTTCGAGAAGTCCTTCTACAAGGAACA
CGCCGATGTCGCCGAGCGCTCTCAGCGTGATGTTGACGAGTTCCGTAAGA
AGCACGAGATGGCTGTTCAGGGAAGAAACGTCCCTCGCCCTGTCGAGACC
TTCGACGAGGCCGGTTTCCCTCAATACGTTCTCAGCGAGGTCAAGGCCCA
GGGCTTCGACCGCCCTACCGCTATTCAGTCTCAGGGTTGGCCCATGGCCC
TCTCTGGTCGCGACGTTGTCGGTATCGCTGAGACGGGTTCCGGAAAGACC
CTGACCTACTGTCTTCCTGCCATTGTTCACATCAACGCCCAGCCCCTCCT
CGCCCCCGGTGACGGCCCCATTGTCCTTATCCTCGCCCCCACCCGTGAAT
TGGCCGTTCAGATTCAAGCCGAAATCTCCAAGTTCGGAAAGTCTTCCCGT
ATCCGCAACACCTGTGTCTACGGTGGTGTCCCCAAGGGTCCTCAGATCCG
TGACCTGAGCCGTGGTGTGGAAGTCTGCATTGCGACTCCCGGTCGTCTGA
TTGACATGCTCGAGGCTGGTCGCACCAACCTTCGTCGTGTCACCTACCTC
GTTCTGGATGAGGCCGATCGCATGCTGGACATGGGTTTCGAGCCCCAGAT
CCGCAAGATCATCTCCCAGATTCGCCCTGACCGTCAGACCTGCATGTGGT
CCGCTACATGGCCCAAGGAGGTCCGTCAGCTTGCGTCTGACTTCCTCAAC
GACTACATCCAGGTTAACATTGGTTCCATGGATCTGTCGGCCAACCACCG
TATCACTCAGATCGTCGAGGTCGTCTCGGACTTCGAGAAGCGCGACAAGA
TGATCAAGCACCTCGAGAAGATCATGGAGAACCGTGCCAACAAGTGCCTT
ATCTTCACCGGCACCAAGCGCATCGCTGACGAAATCACTCGCTTCCTCCG
CCAGGACGGATGGCCGGCACTTTCTATTCACGGTGATAAGCAACAGCAAG
AAAGAGATTGGGTCTTGAACGAGTTCAAGACGGGCAAGAGCCCAATCATG
GTGGCTACTGATGTGGCTTCCCGTGGTATCGGTATGAATAAATCGCAAAC
TCCCCCCTCCCCTTCCCCCCCTTCCTCCCTTCCTTTCTTGCCTCCCGAGT
CACCCTCACCCATATTGAGGTTGTGTGACCATGGCACGGTGCTTAACTCT
CTTCCACCAATTGTTGGTGTGTATGACTCTTCCAGGCTTTGTCGGGTCTC
CTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR014014 |
| DBxref | InterPro:IPR000629 |
| DBxref | InterPro:IPR011545 |
| DBxref | InterPro:IPR014001 |
| DBxref | InterPro:IPR001650 |
| DBxref | PFAM:PF00271 |
| DBxref | PFAM:PF00270 |
| Product | ATP-dependent RNA helicase dbp2 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851900.1 | supercontig | KZ851900.1:603530..605905 + |
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