You are here

Home

M747DRAFT_292060-T1, M747DRAFT_292060-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_292060-T1
Unique NameM747DRAFT_292060-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851900.1:1006497..1007760+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_292060-T1 ID=M747DRAFT_292060-T1|Name=M747DRAFT_292060-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1264bp|location=Sequence derived from alignment at KZ851900.1:1006497..1007760+ (Aspergillus niger ATCC 13496)
CAGTTCATGCAGTTGGTACTATATGCAATCTTTCAAGGACAAGCTCTCAG
CTTCAACAAGTCGTACAAGTCCTTGGTAGTACCATCAACATGTCAGTCAA
CAGTTCACAGCGAATAGCCTTGATCGGGTTGGGAACCATCGGCATATCCA
TGGCAGCGCTTCATCTCTCTCGTGAGAGCAACGTGGTTGATGTATTCGAC
ACCCGACCGGATTTCGAAGACTATATCCACATGACACTGCCGATCTACAT
GAGCGAGCTTCCATCAACGACTACTGACTCTAAACTAAGTCCTGATTCTC
ATCCACCAACAATGTCATTGGTAGCGTCCCTTATCTCTTCCGGCCGTCTG
CGGATTCACTCGACTCTAGAAAGCGCGTGCGCGTCGGCCACCATTGTCCA
GGAGCAGGGACCAGAGAACGTTGACTGGAAGCAGTCTGCCTGGGCCCGGA
TTGAAGCAGTAGCCCCGCCTTCTGCCCATCTCTGGACAAGCACATCTGGA
ATTGCCGCTTCCATTCAGCAAGCTAAGATGCAGGACAAGACTCGTCTGCT
TGTTGTGCATCCGTTCAACCCACCGAATATCATGCCTCTTCTGGAGATTG
TGCCGGCTCCAGGAACCTCTGCGGAACGGGTGGAGTTTGCTCGTGAATAC
TTCTCTCTACCTGGGTCAAGACATAGGCCCGTGGTCATCCAAAAAGAGAT
TCCAGGATTTGTGGGCAATCGGTTGGCGTTCGCGCTACTACGGGAAGCTT
GCTATCTGGTTCAAGAAGACGTGGTAAACGCAAAGGACCTGGACACGATA
TTGATGGCTAGTCTGGGACCCAGATGGGCTGGGAATGGTGTGTTTGAGAG
TTACCAGCATGGTGGTGGAGAAGGTGGCATAGGCTCCTTCCTGGACAAGC
TTGGTGGCACCATGCAAACCGTCTGGGATGGGCAGGGGAGAGTAAACGTG
GAGGGCGACGAAAGAACGGAGTGGAAGGAAAAGGTCGTTGCGCAAGTGAA
CGAAGCCTATGGAACACTGTCTGCGGAGCAAATCCAGATAAAGGAGGCAC
GATTGAAGGATATCATAGGGATCCAGACGAAGGATTACAGCCGCGATGGA
CCATAATGATGAGGGGAACAGGCATGATGATAACTTCGGGAAACTGATGC
CCGCGGGAGCTTGGATGATGGCGGCCTTTAAAAGCCCGGGTGGTTGGCCA
AAGCGATGTTTCACTGATTCTTGGGAGTCCACAACATGTAATCATTCGTG
AAATGAGTAGTCTC
back to top

Coding sequence (CDS) from alignment at KZ851900.1:1006497..1007760+

>M747DRAFT_292060-T1 ID=M747DRAFT_292060-T1|Name=M747DRAFT_292060-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=957bp|location=Sequence derived from alignment at KZ851900.1:1006497..1007760+ (Aspergillus niger ATCC 13496)
ATGGCAGCGCTTCATCTCTCTCGTGAGAGCAACGTGGTTGATGTATTCGA
CACCCGACCGGATTTCGAAGACTATATCCACATGACACTGCCGATCTACA
TGAGCGAGCTTCCATCAACGACTACTGACTCTAAACTAAGTCCTGATTCT
CATCCACCAACAATGTCATTGGTAGCGTCCCTTATCTCTTCCGGCCGTCT
GCGGATTCACTCGACTCTAGAAAGCGCGTGCGCGTCGGCCACCATTGTCC
AGGAGCAGGGACCAGAGAACGTTGACTGGAAGCAGTCTGCCTGGGCCCGG
ATTGAAGCAGTAGCCCCGCCTTCTGCCCATCTCTGGACAAGCACATCTGG
AATTGCCGCTTCCATTCAGCAAGCTAAGATGCAGGACAAGACTCGTCTGC
TTGTTGTGCATCCGTTCAACCCACCGAATATCATGCCTCTTCTGGAGATT
GTGCCGGCTCCAGGAACCTCTGCGGAACGGGTGGAGTTTGCTCGTGAATA
CTTCTCTCTACCTGGGTCAAGACATAGGCCCGTGGTCATCCAAAAAGAGA
TTCCAGGATTTGTGGGCAATCGGTTGGCGTTCGCGCTACTACGGGAAGCT
TGCTATCTGGTTCAAGAAGACGTGGTAAACGCAAAGGACCTGGACACGAT
ATTGATGGCTAGTCTGGGACCCAGATGGGCTGGGAATGGTGTGTTTGAGA
GTTACCAGCATGGTGGTGGAGAAGGTGGCATAGGCTCCTTCCTGGACAAG
CTTGGTGGCACCATGCAAACCGTCTGGGATGGGCAGGGGAGAGTAAACGT
GGAGGGCGACGAAAGAACGGAGTGGAAGGAAAAGGTCGTTGCGCAAGTGA
ACGAAGCCTATGGAACACTGTCTGCGGAGCAAATCCAGATAAAGGAGGCA
CGATTGAAGGATATCATAGGGATCCAGACGAAGGATTACAGCCGCGATGG
ACCATAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0070403NAD+ binding
GO:0016491oxidoreductase activity
GO:00038573-hydroxyacyl-CoA dehydrogenase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0006631fatty acid metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_292060M747DRAFT_292060Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292060-T1.utr5p1M747DRAFT_292060-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292060-T1.exon1M747DRAFT_292060-T1.exon1Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292060-T1.cdsM747DRAFT_292060-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292060-T1.utr3p1M747DRAFT_292060-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292060-T1M747DRAFT_292060-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR008927
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR022694
DBxrefInterPro:IPR006108
DBxrefInterPro:IPR013328
DBxrefInterPro:IPR006176
DBxrefPFAM:PF02737
DBxrefPFAM:PF00725
ProductNAD(P)-binding protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851900.1supercontigKZ851900.1:1006497..1007760 +
Powered by Drupal