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M747DRAFT_292111-T1, M747DRAFT_292111-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_292111-T1
Unique NameM747DRAFT_292111-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851900.1:1186500..1188173+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_292111-T1 ID=M747DRAFT_292111-T1|Name=M747DRAFT_292111-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1674bp|location=Sequence derived from alignment at KZ851900.1:1186500..1188173+ (Aspergillus niger ATCC 13496)
TCTCCATCCAGTCCCTTCGATCGTTCGATGTGACTTCCAGGGTCCTGATC
CCATTCTCATACTTCCGATGTCTCGCCGTAATATCCAAGAAAAGGAGAAG
AGTGGAGGACACAACAAGTCAAATGAAAAACCTACTTATAGAACCTTTGT
ATCCGTCTCCATGGGTTCTCTTCCATTCCCTCATCACGCTCTCAGTCTCT
CTTTCTTGTCTTTCCTTTCCCAGCTTCTCTCTAGTCCTTCCTTAATCGTA
CCCGGTTGATCCAGGTTCCATTCCTTCATTATCATCATGCATTTCCTCCA
GAACGCCGTTGTGGCCGCCACTATGGGCGCTGCGCTGGCCGCCGCTGCTC
CTCTCGAGAAGCGCTCCTGCACTTTCACCTCCGCCTCTGCTGCCAAGTCC
GGCAAGTCCTCTTGCTCCACCATCACCCTCGACAACATCGCGGTCCCCGC
TGGTGAGACTCTTGACTTGACTGGCCTCAAGAAGGGTACCACCGTACGTC
TTCTCTAGCTCCCATAGTACTCTTCCTACTCCGATTGGACCAACTAACTC
TCTTCCCTCACAGGTCATCTTCGAGGGTGAGACCACCTTCGGCTACAAGG
AATGGAAGGGTCCCCTGATCTCCATGTCCGGTACCGACATCACCGTCAAG
CAGGCCTCCGGTGCCAAGATCAACTGCGACGGTGCTCGCTGGTGGGACGG
CAAGGGTAGCAACGGTGGCAAGACCAAGCCCAAGTTCTTCCAGGCCCACA
AGCTCGACCAGTCCAGCATCACCGGCCTGAAGGTCTACAACACCCCTGTC
CAGGGTTTCAGCATTCTGGCCGACCACCTGACCATCACCGATGTGACCAT
CGACAACTCCGCCGGTACCAGCAAGGGTCACAACACCGATGCCTTTGACA
TTGGCCAGAGTACCTACATCACCATTGACGGTGCCACCGTCTACAACCAG
GATGACTGCCTGGCCATCAACTCGGGTGAGGTATGTATATGTCTTGCCCC
ATCGCGCTGCCACTGTCCCGTAGCCACACGTGATTAGAGACTGACTAGAA
CACAGCACATCACCTTCACCAACGGCTACTGTGATGGTGGCCACGGTCTC
TCCATCGGTTCCATCGGTGGCCGCAGTGACAACACCGTCAACGACGTGAC
CATCTCCAACTCCAAGGTGCTCAACTCCCAGAACGGTGTCCGCATCAAGA
CCATCTACGGCAAGACTGGCACTGTCGAGAACGTCAAGTTTGAGGACATC
ACCCTGTCCGACATCAGCAAGTACGGTATTGTCGTTGAGCAGGACTACGA
GAACGGCAGCCCCACCGGCACGCCCACCAACGGTGTCAAGGTTGAGGACA
TCACTTTCAAGAAGGTCACCGGCAGCGTCAAGAGCTCTGGTACTGACATC
TACATCCTGTGCGGTTCCGGCAGCTGCTCGAACTGGACCTGGAGCGGTGT
TGATGTGACTGGCGGCAAGAAGAGCAGCAAGTGCAAGAACGTCCCCTCGG
GCGCTTCCTGCAGCGATTAAACGGGTCTCTGGCCAGCTGTGTTGAGCCTT
CCTAGCAAGGCTGCGTGAGGTTCTCGTTCAGGACTCTGGCATCACGCCGG
GAGTGTTTGTATTAGCTTTTAATTTTAGTGTATCATTGGAAAAATGCATG
ACTCGAGTCTAATTTACACTGATC
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Coding sequence (CDS) from alignment at KZ851900.1:1186500..1188173+

>M747DRAFT_292111-T1 ID=M747DRAFT_292111-T1|Name=M747DRAFT_292111-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3267bp|location=Sequence derived from alignment at KZ851900.1:1186500..1188173+ (Aspergillus niger ATCC 13496)
ATGCATTTCCTCCAGAACGCCGTTGTGGCCGCCACTATGGGCGCTGCGCT
GGCCGCCGCTGCTCCTCTCGAGAAGCGCTCCTGCACTTTCACCTCCGCCT
CTGCTGCCAAGTCCGGCAAGTCCTCTTGCTCCACCATCACCCTCGACAAC
ATCGCGGTCCCCGCTGGTGAGACTCTTGACTTGACTGGCCTCAAGAAGGG
TACCACCGTCATCTTCGAGGGTGAGACCACCTTCGGCTACAAGGAATGGA
AGGGTCCCCTGATCTCCATGTCCGGTACCGACATCACCGTCAAGCAGGCC
TCCGGTGCCAAGATCAACTGCGACGGTGCTCGCTGGTGGGACGGCAAGGG
TAGCAACGGTGGCAAGACCAAGCCCAAGTTCTTCCAGGCCCACAAGCTCG
ACCAGTCCAGCATCACCGGCCTGAAGGTCTACAACACCCCTGTCCAGGGT
TTCAGCATTCTGGCCGACCACCTGACCATCACCGATGTGACCATCGACAA
CTCCGCCGGTACCAGCAAGGGTCACAACACCGATGCCTTTGACATTGGCC
AGAGTACCTACATCACCATTGACGGTGCCACCGTCTACAACCAGGATGAC
TGCCTGGCCATCAACTCGGGTGAGCACATCACCTTCACCAACGGCTACTG
TGATGGTGGCCACGGTCTCTCCATCGGTTCCATCGGTGGCCGCAGTGACA
ACACCGTCAACGACGTGACCATCTCCAACTCCAAGGTGCTCAACTCCCAG
AACGGTGTCCGCATCAAGACCATCTACGGCAAGACTGGCACTGTCGAGAA
CGTCAAGTTTGAGGACATCACCCTGTCCGACATCAGCAAGTACGGTATTG
TCGTTGAGCAGGACTACGAGAACGGCAGCCCCACCGGCACGCCCACCAAC
GGTGTCAAGGTTGAGGACATCACTTTCAAGAAGGTCACCGGCAGCGTCAA
GAGCTCTGGTACTGACATCTACATCCTGTGCGGTTCCGGCAGCTGCTCGA
ACTGGACCTGGAGCGGTGTTGATGTGACTGGCGGCAAGAAGAGCAGCAAG
TGCAAGAACGTCCCCTCGGGCGCTTCCTGCAGCGATTAAATGCATTTCCT
CCAGAACGCCGTTGTGGCCGCCACTATGGGCGCTGCGCTGGCCGCCGCTG
CTCCTCTCGAGAAGCGCTCCTGCACTTTCACCTCCGCCTCTGCTGCCAAG
TCCGGCAAGTCCTCTTGCTCCACCATCACCCTCGACAACATCGCGGTCCC
CGCTGGTGAGACTCTTGACTTGACTGGCCTCAAGAAGGGTACCACCGTCA
TCTTCGAGGGTGAGACCACCTTCGGCTACAAGGAATGGAAGGGTCCCCTG
ATCTCCATGTCCGGTACCGACATCACCGTCAAGCAGGCCTCCGGTGCCAA
GATCAACTGCGACGGTGCTCGCTGGTGGGACGGCAAGGGTAGCAACGGTG
GCAAGACCAAGCCCAAGTTCTTCCAGGCCCACAAGCTCGACCAGTCCAGC
ATCACCGGCCTGAAGGTCTACAACACCCCTGTCCAGGGTTTCAGCATTCT
GGCCGACCACCTGACCATCACCGATGTGACCATCGACAACTCCGCCGGTA
CCAGCAAGGGTCACAACACCGATGCCTTTGACATTGGCCAGAGTACCTAC
ATCACCATTGACGGTGCCACCGTCTACAACCAGGATGACTGCCTGGCCAT
CAACTCGGGTGAGCACATCACCTTCACCAACGGCTACTGTGATGGTGGCC
ACGGTCTCTCCATCGGTTCCATCGGTGGCCGCAGTGACAACACCGTCAAC
GACGTGACCATCTCCAACTCCAAGGTGCTCAACTCCCAGAACGGTGTCCG
CATCAAGACCATCTACGGCAAGACTGGCACTGTCGAGAACGTCAAGTTTG
AGGACATCACCCTGTCCGACATCAGCAAGTACGGTATTGTCGTTGAGCAG
GACTACGAGAACGGCAGCCCCACCGGCACGCCCACCAACGGTGTCAAGGT
TGAGGACATCACTTTCAAGAAGGTCACCGGCAGCGTCAAGAGCTCTGGTA
CTGACATCTACATCCTGTGCGGTTCCGGCAGCTGCTCGAACTGGACCTGG
AGCGGTGTTGATGTGACTGGCGGCAAGAAGAGCAGCAAGTGCAAGAACGT
CCCCTCGGGCGCTTCCTGCAGCGATTAAATGCATTTCCTCCAGAACGCCG
TTGTGGCCGCCACTATGGGCGCTGCGCTGGCCGCCGCTGCTCCTCTCGAG
AAGCGCTCCTGCACTTTCACCTCCGCCTCTGCTGCCAAGTCCGGCAAGTC
CTCTTGCTCCACCATCACCCTCGACAACATCGCGGTCCCCGCTGGTGAGA
CTCTTGACTTGACTGGCCTCAAGAAGGGTACCACCGTCATCTTCGAGGGT
GAGACCACCTTCGGCTACAAGGAATGGAAGGGTCCCCTGATCTCCATGTC
CGGTACCGACATCACCGTCAAGCAGGCCTCCGGTGCCAAGATCAACTGCG
ACGGTGCTCGCTGGTGGGACGGCAAGGGTAGCAACGGTGGCAAGACCAAG
CCCAAGTTCTTCCAGGCCCACAAGCTCGACCAGTCCAGCATCACCGGCCT
GAAGGTCTACAACACCCCTGTCCAGGGTTTCAGCATTCTGGCCGACCACC
TGACCATCACCGATGTGACCATCGACAACTCCGCCGGTACCAGCAAGGGT
CACAACACCGATGCCTTTGACATTGGCCAGAGTACCTACATCACCATTGA
CGGTGCCACCGTCTACAACCAGGATGACTGCCTGGCCATCAACTCGGGTG
AGCACATCACCTTCACCAACGGCTACTGTGATGGTGGCCACGGTCTCTCC
ATCGGTTCCATCGGTGGCCGCAGTGACAACACCGTCAACGACGTGACCAT
CTCCAACTCCAAGGTGCTCAACTCCCAGAACGGTGTCCGCATCAAGACCA
TCTACGGCAAGACTGGCACTGTCGAGAACGTCAAGTTTGAGGACATCACC
CTGTCCGACATCAGCAAGTACGGTATTGTCGTTGAGCAGGACTACGAGAA
CGGCAGCCCCACCGGCACGCCCACCAACGGTGTCAAGGTTGAGGACATCA
CTTTCAAGAAGGTCACCGGCAGCGTCAAGAGCTCTGGTACTGACATCTAC
ATCCTGTGCGGTTCCGGCAGCTGCTCGAACTGGACCTGGAGCGGTGTTGA
TGTGACTGGCGGCAAGAAGAGCAGCAAGTGCAAGAACGTCCCCTCGGGCG
CTTCCTGCAGCGATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_292111M747DRAFT_292111Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292111-T1M747DRAFT_292111-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292111-T1.utr5p1M747DRAFT_292111-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292111-T1.exon1M747DRAFT_292111-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_292111-T1.exon2M747DRAFT_292111-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_292111-T1.exon3M747DRAFT_292111-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292111-T1.cdsM747DRAFT_292111-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292111-T1.utr3p1M747DRAFT_292111-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteSECRETED:SignalP(1-18)
NoteCAZy:GH28
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR012334
DBxrefInterPro:IPR000743
DBxrefInterPro:IPR006626
DBxrefPFAM:PF00295
Productendopolygalacturonases pgaB
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851900.1supercontigKZ851900.1:1186500..1188173 +
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