You are here

Home

M747DRAFT_292210-T1, M747DRAFT_292210-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_292210-T1
Unique NameM747DRAFT_292210-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851900.1:1528862..1530083-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_292210-T1 ID=M747DRAFT_292210-T1|Name=M747DRAFT_292210-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1222bp|location=Sequence derived from alignment at KZ851900.1:1528862..1530083- (Aspergillus niger ATCC 13496)
CACCAACCTCGACAACCAACCTCACGACAGAAGGCAGCATCCGCAGCACA
GCCAGCTACCCGTCGCTCGTCTGCAATCATGGCTGCTATCAACAAGATCG
CCATCAACTCGCCGTCGAGGCAGAACCCCTCCGAGCTGGAGACCGCGATC
GCCGGTGCTCTCTTCGACCTCGAGAGCAACACACAGGACCTGAAGGCCAC
CCTCAGGCCCCTGCAGTTTGTCTCTGCCCGTGAGGTAAGGATGATTTGGT
TTTTTCATACATAGCCTCCGTCCGTGTACAGATCAGAGGCGTCGAGAGTT
TTTGAATCGCGGAAATTGCCAACATACGAGACGTTTTGGGGAAATATCAA
ATATCCATGTGGATATTGTGCGTGTGTGCGGTCCGCACCTGGATGATGTA
TACGTGTGCTTGGGGACTGAATACCACCAGCATCGAGGAAAAGAAGAAAA
AAAAAAAAAAAGAAACGAATTGAATCGTCCCAACAACCGACCGACACTCT
GATCTGCTGCGCGAACTGGGGATAAGAAAATTATTTGTTTTCTCGGATTG
TGCGCAATTTGATATTGACTCTACTATCACAATAGGTCGAGGTCGGCCAC
GGCAAGAAGGCAGTCATCATCTTCGTCCCTGTCCCTCTCCTCCAGGGCTT
CCACAAGATCCAGCAGCGGTACGATTTTCCACTCCACAATCATCACCTCC
ACACCAAATAAAATCTACACCAACATCAACCCCGGAATGTGCCAGCCACA
TGATACCCACAACCCCCGGAGTGTTGGCAATTAAAAAAACGAAACACCAG
AACCATAACTGACAATGATATCATAGCCTGACCCGTGAGCTCGAGAAGAA
GTTCTCCGACCGCCACGTTCTCTTCGTTGCTCAGCGCCGCATCCTGCCCC
GCCCCAAGCGCTCCGCCAGCTCTCGTTCCAACCAGAAGCAGAAGCGTCCC
CGTTCCCGCACTCTGACTGCTGTCCACGACGCCATCCTCACCGACCTCGT
CTACCCCGTCGAGATCGTCGGCAAGCGTACCCGCACCAAGGAGGACGGCT
CCAAGACCCTCAAGGTCATCCTGGACGAGAAGGAGCGTGGTGGTGTTGAC
CACCGCCTTGATGCCTACGGCGAGGTCTACCGTCGGTTGACTGGCCGTGC
TGTTGTCTTTGAATTCCCCCAGGGTGGTGCCGACTACTAGAAAGGATCAA
ATTTTTTTTCCTCTTTTTTTTT
back to top

Coding sequence (CDS) from alignment at KZ851900.1:1528862..1530083-

>M747DRAFT_292210-T1 ID=M747DRAFT_292210-T1|Name=M747DRAFT_292210-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1809bp|location=Sequence derived from alignment at KZ851900.1:1528862..1530083- (Aspergillus niger ATCC 13496)
CCTGACCCGTGAGCTCGAGAAGAAGTTCTCCGACCGCCACGTTCTCTTCG
TTGCTCAGCGCCGCATCCTGCCCCGCCCCAAGCGCTCCGCCAGCTCTCGT
TCCAACCAGAAGCAGAAGCGTCCCCGTTCCCGCACTCTGACTGCTGTCCA
CGACGCCATCCTCACCGACCTCGTCTACCCCGTCGAGATCGTCGGCAAGC
GTACCCGCACCAAGGAGGACGGCTCCAAGACCCTCAAGGTCATCCTGGAC
GAGAAGGAGCGTGGTGGTGTTGACCACCGCCTTGATGCCTACGGCGAGGT
CTACCGTCGGTTGACTGGCCGTGCTGTTGTCTTTGAATTCCCCCAGGGTG
GTGCCGACTACTAGGTCGAGGTCGGCCACGGCAAGAAGGCAGTCATCATC
TTCGTCCCTGTCCCTCTCCTCCAGGGCTTCCACAAGATCCAGCAGCGATG
GCTGCTATCAACAAGATCGCCATCAACTCGCCGTCGAGGCAGAACCCCTC
CGAGCTGGAGACCGCGATCGCCGGTGCTCTCTTCGACCTCGAGAGCAACA
CACAGGACCTGAAGGCCACCCTCAGGCCCCTGCAGTTTGTCTCTGCCCGT
GAGCCTGACCCGTGAGCTCGAGAAGAAGTTCTCCGACCGCCACGTTCTCT
TCGTTGCTCAGCGCCGCATCCTGCCCCGCCCCAAGCGCTCCGCCAGCTCT
CGTTCCAACCAGAAGCAGAAGCGTCCCCGTTCCCGCACTCTGACTGCTGT
CCACGACGCCATCCTCACCGACCTCGTCTACCCCGTCGAGATCGTCGGCA
AGCGTACCCGCACCAAGGAGGACGGCTCCAAGACCCTCAAGGTCATCCTG
GACGAGAAGGAGCGTGGTGGTGTTGACCACCGCCTTGATGCCTACGGCGA
GGTCTACCGTCGGTTGACTGGCCGTGCTGTTGTCTTTGAATTCCCCCAGG
GTGGTGCCGACTACTAGGTCGAGGTCGGCCACGGCAAGAAGGCAGTCATC
ATCTTCGTCCCTGTCCCTCTCCTCCAGGGCTTCCACAAGATCCAGCAGCG
ATGGCTGCTATCAACAAGATCGCCATCAACTCGCCGTCGAGGCAGAACCC
CTCCGAGCTGGAGACCGCGATCGCCGGTGCTCTCTTCGACCTCGAGAGCA
ACACACAGGACCTGAAGGCCACCCTCAGGCCCCTGCAGTTTGTCTCTGCC
CGTGAGCCTGACCCGTGAGCTCGAGAAGAAGTTCTCCGACCGCCACGTTC
TCTTCGTTGCTCAGCGCCGCATCCTGCCCCGCCCCAAGCGCTCCGCCAGC
TCTCGTTCCAACCAGAAGCAGAAGCGTCCCCGTTCCCGCACTCTGACTGC
TGTCCACGACGCCATCCTCACCGACCTCGTCTACCCCGTCGAGATCGTCG
GCAAGCGTACCCGCACCAAGGAGGACGGCTCCAAGACCCTCAAGGTCATC
CTGGACGAGAAGGAGCGTGGTGGTGTTGACCACCGCCTTGATGCCTACGG
CGAGGTCTACCGTCGGTTGACTGGCCGTGCTGTTGTCTTTGAATTCCCCC
AGGGTGGTGCCGACTACTAGGTCGAGGTCGGCCACGGCAAGAAGGCAGTC
ATCATCTTCGTCCCTGTCCCTCTCCTCCAGGGCTTCCACAAGATCCAGCA
GCGATGGCTGCTATCAACAAGATCGCCATCAACTCGCCGTCGAGGCAGAA
CCCCTCCGAGCTGGAGACCGCGATCGCCGGTGCTCTCTTCGACCTCGAGA
GCAACACACAGGACCTGAAGGCCACCCTCAGGCCCCTGCAGTTTGTCTCT
GCCCGTGAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CRP15M747DRAFT_292210Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292210-T1M747DRAFT_292210-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292210-T1.cdsM747DRAFT_292210-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292210-T1.utr3p1M747DRAFT_292210-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292210-T1.exon3M747DRAFT_292210-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_292210-T1.exon2M747DRAFT_292210-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_292210-T1.exon1M747DRAFT_292210-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292210-T1.utr5p1M747DRAFT_292210-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR000554
DBxrefPFAM:PF01251
Product40S ribosomal protein S7
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851900.1supercontigKZ851900.1:1528862..1530083 -
Powered by Drupal