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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851901.1:16247..17902- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_292223-T1 ID=M747DRAFT_292223-T1|Name=M747DRAFT_292223-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1656bp|location=Sequence derived from alignment at KZ851901.1:16247..17902- (Aspergillus niger ATCC 13496)
CCTGTTAACGACACCAGTTCCTCTGCGTGCGACTTACGCTTATCACCGGC
TTTACTGCCAGCCACGCAACTCACTCTCCAGCTTGTCATTTTCGCCCCAA
ACTTGACGACTTTTGCCCGCCATGGCTCCTTCAAAGTGGGGTATGTCCTC
TTTTGGAGATTTTTGTGGCCCTCGCCCGCAATAGGGACATACATTGCGGG
ACAACATGGCGAATCATTCACGATACTGACGGCTTCTTTCAGATGACGAA
GAAGAGAGTGTCTCTCCCCCTCCTGTGGTTGCCCGCCGCAAGTTCGACGA
CGAGGAAGAGGAAGATGTGAGTTTTTGCCGCCCCTCCCCCCTCCTTTTCC
ATTTTTGCCTCACAATTTGCCCCGCGCTGTTTCTCTTGGCCTCAGTCGCT
GAAAACTCGCNCCCCCCCCCCCCATCATTTTTTCCCCCGTCCACGATCTG
ACCGAATGAACTAGGTCCTCGACTCCTGGGACGCCGCCGAAGATTCCGAA
GTAGAGCGTGAGAAGGCCGCCAAGGCAGCGGAGGCCAAGGCTAAGGCGGA
AGCCGAAGCCGCCGCCAACAAGAAGAGCAAGGCACAGCGGATACAGGAAA
AGAAGGCCCAGCGGAAGGCAGATGCCGATGCTGAGGATTCGGACGACAGC
GACGAGGACGAGGCCGAGCGGAGAGCCCGTCTCCGCAAGACGGAGAAGGA
CGCTGACCTTAAGCACGCCGAGGACCTGTTCGGCGACATCGACCTGAACC
GTATGCGCAACCGCAGCGCCCCCAAGGCCGTTGTCATCAGTGACGGGACC
GACCCGACCCAGGCCGTCGATCTGTCGGCTATGCCTCTCTTCAAGCCCGC
CACCAAGGACCAGTTCACCCGCGTTACGACCACCCTTATCCCTCTGTTGA
CGACCCAGTCGAAGAAGCCCCAGTATGCTCTGTGGGCGCAGGACTTCATC
AAGCAGCTCGTCAAGGACCTGCCCAGCGGTGATGTCAAAAAGATCGCTTC
CTCGCTGACTACTCTCAGCAATGAGAAGATGAAGGAGGAGCGTGCTGCCG
ATAAGGGTAACAAGAAGACCAAGGCGGCCAAGACCAAGGTCTCTCTGGTC
ACCTCTAGAGAGAACAAGATTGAAACCAACTCTTATGATGATGATGGGTT
GGATGACGATGACTTCATGTGATTTTGTTATTTAGAATATTTTATATTTC
CTTTTCTTCTTCTCACCACCGATCCCCTTAACACTCTTGCTTCATTTGCT
TCAGATTTCTCGGTTTCTTCTTTTTTCTTCTCCCCAGTTATCCACTATAT
CTTTGCTAGACCGGCCTGCGCCCTGGCATGCATCATAAAATCATGTCCGT
TGGTCATCATCTGTTTTGTATATCCGTCATATAAAGTATTCTTTTATTCC
CTCCCCCCTCGGTCGTCTTTCGCTGTCCCGCTTCCTACCTCCGGTTTATA
GAGCATGGTTCATCTCTTCCGTACATTTCCGTTGGTACTAGCATTTATGT
CTTCAGCTAGTATAGAAGCTGCCGCAGTTGTTCGCTTACTACCTGCCTAA
GTCCTTAACTTTTTAAAGTGTTTAACCTATACGTAGTGTTAAACGAGTAC
TGGGAGGTGGTGAGGTAGAAAATGTTCTGCACGGGCAGTGGGTATTTGGT
AGTGTG back to topCoding sequence (CDS) from alignment at KZ851901.1:16247..17902- >M747DRAFT_292223-T1 ID=M747DRAFT_292223-T1|Name=M747DRAFT_292223-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2403bp|location=Sequence derived from alignment at KZ851901.1:16247..17902- (Aspergillus niger ATCC 13496)
GTCCTCGACTCCTGGGACGCCGCCGAAGATTCCGAAGTAGAGCGTGAGAA
GGCCGCCAAGGCAGCGGAGGCCAAGGCTAAGGCGGAAGCCGAAGCCGCCG
CCAACAAGAAGAGCAAGGCACAGCGGATACAGGAAAAGAAGGCCCAGCGG
AAGGCAGATGCCGATGCTGAGGATTCGGACGACAGCGACGAGGACGAGGC
CGAGCGGAGAGCCCGTCTCCGCAAGACGGAGAAGGACGCTGACCTTAAGC
ACGCCGAGGACCTGTTCGGCGACATCGACCTGAACCGTATGCGCAACCGC
AGCGCCCCCAAGGCCGTTGTCATCAGTGACGGGACCGACCCGACCCAGGC
CGTCGATCTGTCGGCTATGCCTCTCTTCAAGCCCGCCACCAAGGACCAGT
TCACCCGCGTTACGACCACCCTTATCCCTCTGTTGACGACCCAGTCGAAG
AAGCCCCAGTATGCTCTGTGGGCGCAGGACTTCATCAAGCAGCTCGTCAA
GGACCTGCCCAGCGGTGATGTCAAAAAGATCGCTTCCTCGCTGACTACTC
TCAGCAATGAGAAGATGAAGGAGGAGCGTGCTGCCGATAAGGGTAACAAG
AAGACCAAGGCGGCCAAGACCAAGGTCTCTCTGGTCACCTCTAGAGAGAA
CAAGATTGAAACCAACTCTTATGATGATGATGGGTTGGATGACGATGACT
TCATGTGAATGACGAAGAAGAGAGTGTCTCTCCCCCTCCTGTGGTTGCCC
GCCGCAAGTTCGACGACGAGGAAGAGGAAGATATGGCTCCTTCAAAGTGG
GGTCCTCGACTCCTGGGACGCCGCCGAAGATTCCGAAGTAGAGCGTGAGA
AGGCCGCCAAGGCAGCGGAGGCCAAGGCTAAGGCGGAAGCCGAAGCCGCC
GCCAACAAGAAGAGCAAGGCACAGCGGATACAGGAAAAGAAGGCCCAGCG
GAAGGCAGATGCCGATGCTGAGGATTCGGACGACAGCGACGAGGACGAGG
CCGAGCGGAGAGCCCGTCTCCGCAAGACGGAGAAGGACGCTGACCTTAAG
CACGCCGAGGACCTGTTCGGCGACATCGACCTGAACCGTATGCGCAACCG
CAGCGCCCCCAAGGCCGTTGTCATCAGTGACGGGACCGACCCGACCCAGG
CCGTCGATCTGTCGGCTATGCCTCTCTTCAAGCCCGCCACCAAGGACCAG
TTCACCCGCGTTACGACCACCCTTATCCCTCTGTTGACGACCCAGTCGAA
GAAGCCCCAGTATGCTCTGTGGGCGCAGGACTTCATCAAGCAGCTCGTCA
AGGACCTGCCCAGCGGTGATGTCAAAAAGATCGCTTCCTCGCTGACTACT
CTCAGCAATGAGAAGATGAAGGAGGAGCGTGCTGCCGATAAGGGTAACAA
GAAGACCAAGGCGGCCAAGACCAAGGTCTCTCTGGTCACCTCTAGAGAGA
ACAAGATTGAAACCAACTCTTATGATGATGATGGGTTGGATGACGATGAC
TTCATGTGAATGACGAAGAAGAGAGTGTCTCTCCCCCTCCTGTGGTTGCC
CGCCGCAAGTTCGACGACGAGGAAGAGGAAGATATGGCTCCTTCAAAGTG
GGGTCCTCGACTCCTGGGACGCCGCCGAAGATTCCGAAGTAGAGCGTGAG
AAGGCCGCCAAGGCAGCGGAGGCCAAGGCTAAGGCGGAAGCCGAAGCCGC
CGCCAACAAGAAGAGCAAGGCACAGCGGATACAGGAAAAGAAGGCCCAGC
GGAAGGCAGATGCCGATGCTGAGGATTCGGACGACAGCGACGAGGACGAG
GCCGAGCGGAGAGCCCGTCTCCGCAAGACGGAGAAGGACGCTGACCTTAA
GCACGCCGAGGACCTGTTCGGCGACATCGACCTGAACCGTATGCGCAACC
GCAGCGCCCCCAAGGCCGTTGTCATCAGTGACGGGACCGACCCGACCCAG
GCCGTCGATCTGTCGGCTATGCCTCTCTTCAAGCCCGCCACCAAGGACCA
GTTCACCCGCGTTACGACCACCCTTATCCCTCTGTTGACGACCCAGTCGA
AGAAGCCCCAGTATGCTCTGTGGGCGCAGGACTTCATCAAGCAGCTCGTC
AAGGACCTGCCCAGCGGTGATGTCAAAAAGATCGCTTCCTCGCTGACTAC
TCTCAGCAATGAGAAGATGAAGGAGGAGCGTGCTGCCGATAAGGGTAACA
AGAAGACCAAGGCGGCCAAGACCAAGGTCTCTCTGGTCACCTCTAGAGAG
AACAAGATTGAAACCAACTCTTATGATGATGATGGGTTGGATGACGATGA
CTTCATGTGAATGACGAAGAAGAGAGTGTCTCTCCCCCTCCTGTGGTTGC
CCGCCGCAAGTTCGACGACGAGGAAGAGGAAGATATGGCTCCTTCAAAGT
GGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005737 | cytoplasm |
| GO:0005852 | eukaryotic translation initiation factor 3 complex |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003743 | translation initiation factor activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR023194 |
| DBxref | InterPro:IPR013906 |
| DBxref | PFAM:PF08597 |
| Product | Translation initiation factor 3 subunit J component |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851901.1 | supercontig | KZ851901.1:16247..17902 - |
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