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M747DRAFT_292264-T1, M747DRAFT_292264-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_292264-T1
Unique NameM747DRAFT_292264-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851901.1:138027..139247+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_292264-T1 ID=M747DRAFT_292264-T1|Name=M747DRAFT_292264-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1221bp|location=Sequence derived from alignment at KZ851901.1:138027..139247+ (Aspergillus niger ATCC 13496)
TTTACGACAACCAAACCCGACAGCCAAGTACGCGACAACCTCCCTTCCCC
TTCTCCCTGACTTACATTCTCTGACCCGTTGCTGCAGAGAAATCCGTCAA
GATGGTCAAGAAGAGGGCGAACAAGTAAGACCGAACCCTTTCCTATCCCA
CCCATCCATGCCATGCCACATGCCATGTATACATATACACAATCTACGCA
CACCTGAATGAAGACGGCCGCACGGAAAAATATTCGCCATACATTTGCCG
CAGAATGGCCCGGCTACCGTACAGTGTTGTGTGTGATTTTGGGGAAAAAA
CAGAAGAAAATTGAAGAAATGGCGATGTTCAAATCGAAAACATGGAAAAT
TCGCAAATTTAAAGAAGAGACCGATAAACTAACCTATTTCACAGCGGTCG
TAACAAGAACGGCCGCGGCCACGTCAAGCCCGTGCGCTGCTCCAACTGCG
CTCGCTGCACTCCCAAGGACAAGGCCATCAAGAGATTCACCATCCGCAAC
ATGGTCGAGTCCGCTGCCATCCGTACGTTCCACGATCTTGCTCCATTGAT
CTGAGTTCTTCCCGAAACCGTCCGCGCGCGCTGTTTGTTCATTCTGAAAG
AGCTGGGAAGTGGGGTGTTTTATGTATGCGTGTGCGTATGCGTGTGTATG
CAACAATTCGAAGCGAAATGAACTCGACCGGAATACGACATCGGATAAGA
AGAAAGAGGAATAGATACAACAGCGCGACGCACGAGTGAACGGAATTCGA
CCCATCCTGAAAGACAACATCGGACTGACTGGTTCTTTTTCCAACTCTCC
AGGTGATATCTCGGACGCCTCCGTCTTCACCGACTACGCCGTCCCCAAGA
TGTACCTGAAGCTGCAGTACTGCGTCTCCTGCGCTATCCACGGCAAGATT
GTTCGGTACGCCACCACCCACTCAACAACGATGAATGCGTCGAATCATCA
TCGATTTCGAGAACAAACACAAGCTAATGATTATCCTATAGTGTCCGCTC
CCGGGAAGGTCGTCGCAACCGTGCTCCCCCTCCTCGTATCAGGTACAACA
AGGATGGCAAGAAGCTGAACCCCCCTCAGGCCGCCAAGGCTATGTAAGGA
AGGAATGACAACGATTTCAAAAGAGATAAAAGAAAAATGGAATTAGTTTA
GGGGCCTTAACTGGTGCTTCTTATTATTTTTCTTTATGTTGTCTGAAAAA
AAACCAGAACTTCTTTACTAC
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Coding sequence (CDS) from alignment at KZ851901.1:138027..139247+

>M747DRAFT_292264-T1 ID=M747DRAFT_292264-T1|Name=M747DRAFT_292264-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1440bp|location=Sequence derived from alignment at KZ851901.1:138027..139247+ (Aspergillus niger ATCC 13496)
ATGGTCAAGAAGAGGGCGAACAACGGTCGTAACAAGAACGGCCGCGGCCA
CGTCAAGCCCGTGCGCTGCTCCAACTGCGCTCGCTGCACTCCCAAGGACA
AGGCCATCAAGAGATTCACCATCCGCAACATGGTCGAGTCCGCTGCCATC
CGTGATATCTCGGACGCCTCCGTCTTCACCGACTACGCCGTCCCCAAGAT
GTACCTGAAGCTGCAGTACTGCGTCTCCTGCGCTATCCACGGCAAGATTG
TTCGTGTCCGCTCCCGGGAAGGTCGTCGCAACCGTGCTCCCCCTCCTCGT
ATCAGGTACAACAAGGATGGCAAGAAGCTGAACCCCCCTCAGGCCGCCAA
GGCTATGTAAATGGTCAAGAAGAGGGCGAACAACGGTCGTAACAAGAACG
GCCGCGGCCACGTCAAGCCCGTGCGCTGCTCCAACTGCGCTCGCTGCACT
CCCAAGGACAAGGCCATCAAGAGATTCACCATCCGCAACATGGTCGAGTC
CGCTGCCATCCGTGATATCTCGGACGCCTCCGTCTTCACCGACTACGCCG
TCCCCAAGATGTACCTGAAGCTGCAGTACTGCGTCTCCTGCGCTATCCAC
GGCAAGATTGTTCGTGTCCGCTCCCGGGAAGGTCGTCGCAACCGTGCTCC
CCCTCCTCGTATCAGGTACAACAAGGATGGCAAGAAGCTGAACCCCCCTC
AGGCCGCCAAGGCTATGTAAATGGTCAAGAAGAGGGCGAACAACGGTCGT
AACAAGAACGGCCGCGGCCACGTCAAGCCCGTGCGCTGCTCCAACTGCGC
TCGCTGCACTCCCAAGGACAAGGCCATCAAGAGATTCACCATCCGCAACA
TGGTCGAGTCCGCTGCCATCCGTGATATCTCGGACGCCTCCGTCTTCACC
GACTACGCCGTCCCCAAGATGTACCTGAAGCTGCAGTACTGCGTCTCCTG
CGCTATCCACGGCAAGATTGTTCGTGTCCGCTCCCGGGAAGGTCGTCGCA
ACCGTGCTCCCCCTCCTCGTATCAGGTACAACAAGGATGGCAAGAAGCTG
AACCCCCCTCAGGCCGCCAAGGCTATGTAAATGGTCAAGAAGAGGGCGAA
CAACGGTCGTAACAAGAACGGCCGCGGCCACGTCAAGCCCGTGCGCTGCT
CCAACTGCGCTCGCTGCACTCCCAAGGACAAGGCCATCAAGAGATTCACC
ATCCGCAACATGGTCGAGTCCGCTGCCATCCGTGATATCTCGGACGCCTC
CGTCTTCACCGACTACGCCGTCCCCAAGATGTACCTGAAGCTGCAGTACT
GCGTCTCCTGCGCTATCCACGGCAAGATTGTTCGTGTCCGCTCCCGGGAA
GGTCGTCGCAACCGTGCTCCCCCTCCTCGTATCAGGTACAACAAGGATGG
CAAGAAGCTGAACCCCCCTCAGGCCGCCAAGGCTATGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS26M747DRAFT_292264Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292264-T1M747DRAFT_292264-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292264-T1.utr5p1M747DRAFT_292264-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR
M747DRAFT_292264-T1.utr5p2M747DRAFT_292264-T1.utr5p2Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292264-T1.exon1M747DRAFT_292264-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_292264-T1.exon2M747DRAFT_292264-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_292264-T1.exon3M747DRAFT_292264-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_292264-T1.exon4M747DRAFT_292264-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_292264-T1.exon5M747DRAFT_292264-T1.exon5Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292264-T1.cdsM747DRAFT_292264-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292264-T1.utr3p1M747DRAFT_292264-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09265GYK
DBxrefInterPro:IPR038551
DBxrefInterPro:IPR000892
DBxrefPFAM:PF01283
Product40S ribosomal protein S26
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851901.1supercontigKZ851901.1:138027..139247 +
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