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M747DRAFT_292298-T1, M747DRAFT_292298-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_292298-T1
Unique NameM747DRAFT_292298-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851901.1:233815..235423+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_292298-T1 ID=M747DRAFT_292298-T1|Name=M747DRAFT_292298-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1609bp|location=Sequence derived from alignment at KZ851901.1:233815..235423+ (Aspergillus niger ATCC 13496)
GCCGGGGATCTCCTCCATCTCTGCTCGCTCTTCTCTCGTCTCGAACTTTC
TTATCACTCTCTCTCTGTTTTCCTGGCGCTTATCAAGGACCGCTGCCTTG
CTCGACCTGGTCTAGGTGACTCGGAGCTGATCGCCTCCCGCACCCATCAC
CAGGATAAACACCGTCCAGCGATCTCTCACCGATCCCGCCCCGTTGCCAC
GGACCATCATCTCTTCCCATCCCACCTTCCACCGATTCCAGACCCGTCGT
TACACTTCTTCCCGACTCAACACCAACAACTTCCCCCATCGGACGTCGGA
TCACCCGTCCCTAGCATAACCTCGATCACCGCAATAGCAACCGCTCTCTA
TCACAGCCTAATCAAACCCCATACACCCTTATCAACATGTGGTCTTGGTT
CGGCGGATCCGCCGCTCAGAAGCGGAAAGATGCGCCCAAGAATGCGATCC
TCATGCTTCGCGAGCAGCTGGATATGCTCCAAAAGCGCGAGAAGCATTTG
GAGAATCTGATGGAGGAGCAGGATGCAATTGCTCGGAAGAACGTAACGTC
AAACAAGGCCGGTAGGTGACAGCAGAAAAACAGCAACTAGGCAACAACAA
ATGAAGTCTAACGGGTTATTGATCTGTATAGCGGCTAAGAACGCCCTTCG
ACGGAAGAAGGTTCATGAGAAGAACCTCGAACAGACGACGGCGCAGATCG
TTCAGCTAGAACAGCAGATCTACTCGATTGAGGCGGCGAATATCAACCAG
GAGACTTTGAAGGCTATGGAGGCGGCTGGTGCGGCGATGGCGAAGATCCA
TGGCTCCATGACGCTTGATACGGTGGATCAGACAATGTATGTTGTTTCGT
TACGGTATCATTTGAGTGATGGGAACACGGCAACTGACTATGGTCTAGGG
ATACACTTCGCGAACAGCACCAACTCAGCACCGAAATCGCACAAGCCATT
ACAAGCACCAATCTGGTCGACCAACCAGACGAGGCCGATTTGGAAGAGGA
ACTCGAGGGCTTGGAGCAGGAGGCCATGGACGAGCGGATGCTCAACACAG
GTACGGTGCCGGTTGCAGACCAACTCAACCGTTTACCTCCTGCGGCAAAT
GGAGAAAGTAAGCCACTGTCCCTCCCTCTTTACTATGAAACTCTTCTAAC
GTACATGCAACAGTCAAATCCAAACCTCAGACCGAAGAGGAAGACGAGGA
AGCAGAACTGGAGAAGCTACGTGCGGAAATGGCCATGGGATAACTGCCCA
ACTAGCTATTTTGTTTTCCTCCAATTCCTACAGACTCGGGTTTCTTTCAT
TTTTCCTGCTCTTTTAATCATATGTGTCAAAGAACATTGCTGCCTCAACC
GTTTTGATTGATTGCGTTATTTGCGGCCTTGGAGTTAGTTACTTTCTATT
ACTTGAATCCTTGCATGATGGAATGAATCATTGTCTACTTACTCTCTTGT
TGTCGAGTACATTGGCTAGTAGAGTTCGAATTGTGTAGCTGATCCTTAAT
ACACAGTATACACGAATACATCAATTGTATCTCTACCTCGTTCAAATGTA
TTACGTCCACATGTACTCCTGCAGCCTTGTCTACTACTACTCATAGTAAT
CATGCCTAG
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Coding sequence (CDS) from alignment at KZ851901.1:233815..235423+

>M747DRAFT_292298-T1 ID=M747DRAFT_292298-T1|Name=M747DRAFT_292298-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2676bp|location=Sequence derived from alignment at KZ851901.1:233815..235423+ (Aspergillus niger ATCC 13496)
ATGTGGTCTTGGTTCGGCGGATCCGCCGCTCAGAAGCGGAAAGATGCGCC
CAAGAATGCGATCCTCATGCTTCGCGAGCAGCTGGATATGCTCCAAAAGC
GCGAGAAGCATTTGGAGAATCTGATGGAGGAGCAGGATGCAATTGCTCGG
AAGAACGTAACGTCAAACAAGGCCGCGGCTAAGAACGCCCTTCGACGGAA
GAAGGTTCATGAGAAGAACCTCGAACAGACGACGGCGCAGATCGTTCAGC
TAGAACAGCAGATCTACTCGATTGAGGCGGCGAATATCAACCAGGAGACT
TTGAAGGCTATGGAGGCGGCTGGTGCGGCGATGGCGAAGATCCATGGCTC
CATGACGCTTGATACGGTGGATCAGACAATGGATACACTTCGCGAACAGC
ACCAACTCAGCACCGAAATCGCACAAGCCATTACAAGCACCAATCTGGTC
GACCAACCAGACGAGGCCGATTTGGAAGAGGAACTCGAGGGCTTGGAGCA
GGAGGCCATGGACGAGCGGATGCTCAACACAGGTACGGTGCCGGTTGCAG
ACCAACTCAACCGTTTACCTCCTGCGGCAAATGGAGAAATCAAATCCAAA
CCTCAGACCGAAGAGGAAGACGAGGAAGCAGAACTGGAGAAGCTACGTGC
GGAAATGGCCATGGGATAAATGTGGTCTTGGTTCGGCGGATCCGCCGCTC
AGAAGCGGAAAGATGCGCCCAAGAATGCGATCCTCATGCTTCGCGAGCAG
CTGGATATGCTCCAAAAGCGCGAGAAGCATTTGGAGAATCTGATGGAGGA
GCAGGATGCAATTGCTCGGAAGAACGTAACGTCAAACAAGGCCGCGGCTA
AGAACGCCCTTCGACGGAAGAAGGTTCATGAGAAGAACCTCGAACAGACG
ACGGCGCAGATCGTTCAGCTAGAACAGCAGATCTACTCGATTGAGGCGGC
GAATATCAACCAGGAGACTTTGAAGGCTATGGAGGCGGCTGGTGCGGCGA
TGGCGAAGATCCATGGCTCCATGACGCTTGATACGGTGGATCAGACAATG
GATACACTTCGCGAACAGCACCAACTCAGCACCGAAATCGCACAAGCCAT
TACAAGCACCAATCTGGTCGACCAACCAGACGAGGCCGATTTGGAAGAGG
AACTCGAGGGCTTGGAGCAGGAGGCCATGGACGAGCGGATGCTCAACACA
GGTACGGTGCCGGTTGCAGACCAACTCAACCGTTTACCTCCTGCGGCAAA
TGGAGAAATCAAATCCAAACCTCAGACCGAAGAGGAAGACGAGGAAGCAG
AACTGGAGAAGCTACGTGCGGAAATGGCCATGGGATAAATGTGGTCTTGG
TTCGGCGGATCCGCCGCTCAGAAGCGGAAAGATGCGCCCAAGAATGCGAT
CCTCATGCTTCGCGAGCAGCTGGATATGCTCCAAAAGCGCGAGAAGCATT
TGGAGAATCTGATGGAGGAGCAGGATGCAATTGCTCGGAAGAACGTAACG
TCAAACAAGGCCGCGGCTAAGAACGCCCTTCGACGGAAGAAGGTTCATGA
GAAGAACCTCGAACAGACGACGGCGCAGATCGTTCAGCTAGAACAGCAGA
TCTACTCGATTGAGGCGGCGAATATCAACCAGGAGACTTTGAAGGCTATG
GAGGCGGCTGGTGCGGCGATGGCGAAGATCCATGGCTCCATGACGCTTGA
TACGGTGGATCAGACAATGGATACACTTCGCGAACAGCACCAACTCAGCA
CCGAAATCGCACAAGCCATTACAAGCACCAATCTGGTCGACCAACCAGAC
GAGGCCGATTTGGAAGAGGAACTCGAGGGCTTGGAGCAGGAGGCCATGGA
CGAGCGGATGCTCAACACAGGTACGGTGCCGGTTGCAGACCAACTCAACC
GTTTACCTCCTGCGGCAAATGGAGAAATCAAATCCAAACCTCAGACCGAA
GAGGAAGACGAGGAAGCAGAACTGGAGAAGCTACGTGCGGAAATGGCCAT
GGGATAAATGTGGTCTTGGTTCGGCGGATCCGCCGCTCAGAAGCGGAAAG
ATGCGCCCAAGAATGCGATCCTCATGCTTCGCGAGCAGCTGGATATGCTC
CAAAAGCGCGAGAAGCATTTGGAGAATCTGATGGAGGAGCAGGATGCAAT
TGCTCGGAAGAACGTAACGTCAAACAAGGCCGCGGCTAAGAACGCCCTTC
GACGGAAGAAGGTTCATGAGAAGAACCTCGAACAGACGACGGCGCAGATC
GTTCAGCTAGAACAGCAGATCTACTCGATTGAGGCGGCGAATATCAACCA
GGAGACTTTGAAGGCTATGGAGGCGGCTGGTGCGGCGATGGCGAAGATCC
ATGGCTCCATGACGCTTGATACGGTGGATCAGACAATGGATACACTTCGC
GAACAGCACCAACTCAGCACCGAAATCGCACAAGCCATTACAAGCACCAA
TCTGGTCGACCAACCAGACGAGGCCGATTTGGAAGAGGAACTCGAGGGCT
TGGAGCAGGAGGCCATGGACGAGCGGATGCTCAACACAGGTACGGTGCCG
GTTGCAGACCAACTCAACCGTTTACCTCCTGCGGCAAATGGAGAAATCAA
ATCCAAACCTCAGACCGAAGAGGAAGACGAGGAAGCAGAACTGGAGAAGC
TACGTGCGGAAATGGCCATGGGATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0007034vacuolar transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SNF7M747DRAFT_292298Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292298-T1M747DRAFT_292298-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292298-T1.utr5p1M747DRAFT_292298-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292298-T1.exon1M747DRAFT_292298-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_292298-T1.exon2M747DRAFT_292298-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_292298-T1.exon3M747DRAFT_292298-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_292298-T1.exon4M747DRAFT_292298-T1.exon4Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292298-T1.cdsM747DRAFT_292298-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292298-T1.utr3p1M747DRAFT_292298-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264W71
DBxrefInterPro:IPR005024
DBxrefPFAM:PF03357
ProductESCRT-III subunit protein snf7
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851901.1supercontigKZ851901.1:233815..235423 +
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