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M747DRAFT_292313-T1, M747DRAFT_292313-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_292313-T1
Unique NameM747DRAFT_292313-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851901.1:283627..285512+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_292313-T1 ID=M747DRAFT_292313-T1|Name=M747DRAFT_292313-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1886bp|location=Sequence derived from alignment at KZ851901.1:283627..285512+ (Aspergillus niger ATCC 13496)
CACATCCATCCGGAGCGATTGTTTATTCCTCCGTTATTTTCTTTTTCATC
CTCAGGCTTTTGTCACCATGGCGAAGGCACGTACTAAGAAGCGCACTCAT
GTTCGCGCGCAAAATGCCACGGCTGCTGCTGCCAAAGGCGGCGCCGCATC
TATGAGCAAGACTCCGAAGTCGATGGTTATCCGCGTCGGCGCTTCAGAAG
TCGGTGCTAGTGTGAGCCAGTTGGTCAAAGATGTGCGAACGATGATGGAG
CCGGATACGGCTGTGAGATTGAAGGTGAGCTTTGAATTCTTTCCCGTTCT
CAGCTGGACTACGACTAATGGTATTGGATTTTAGGAACGCAAATCAAACA
GACTAAGGGATTACACGACTATGACTGGTCCCCTTGGAGTCACACATCTT
ATGCTTTTCTCCAAGTCGGCGACTGGAAACACGAATATGCGTTTGGCGCT
TACGCCCCGGGGTCCGACTTTGCACTTCCAGGTGGAAAACTACTCCCTAT
GCCGTGATGTTGAGAAAGCTTTGAAGCGCCCGAGAGGTGGTGGTCAGGAT
CACAAGACGCCTCCTTTGCTGGTCATGAACAACTTCAACTCTCCCAACGC
CACTGAGGACTCTAAGGTACCTAAGCGTCTGGAGAGTCTCTCAACGACCA
TCTTCCAATCTCTCTTCCCCCCGATCAACCCTCAAGCCACTCCCCTCTCC
TCCATTCGCCGTGTAATGCTCTTGAACCGTGAACTCGCCCCCGAGGGTGA
GGAAGAAGAACACTATGTGTTGAACCTCCGTCATTACGCCATTACTACGA
AGAAGACCGGTGTTTCGAAACGCATTCGCCGTCTTGATCCCAAGGAAATC
CGGAACAGGGAGAAGAAGGGAGCTGCTGTGCCCAACCTGGGTAAGCTGGA
GGATGCGGCGGATTATCTGCTGGATCCGTCGGCTGCTGGGTATACCTCGG
CCAGTGAAACGGAAATGGACACGGATGCTGAAGTTGAGGTGGCGGAGAGC
ACCACGAAGAAGGTTCTCTCGAAGCGTGAACTGCAGCGCATGAAGGCTGG
AGAGAAGGAGAAGGCACAGAAGAAGCTGAGCAATGCTCCAGGAGTCGAGA
AGCGGGCGGTCAAGTTGGTTGAGCTGGGCCCTCGTATGAAGCTTCGCTTG
CTTAAGGTTGAAGAAGGCCTCTGCGAAGGTCGCGTGATGTGGCACGATTT
CATCAAGAAGTCTGAGGATGAAGTCACCAAATTGGACAAGAACTGGGACC
AGAAGAAGAAGGAGAAGGAGCAAAGAAAGAAGGAACAAAAGGCAAACATT
GAGAAGAAGAAGCAAGCCAAGGCTCAAGCTAAAGCCGAAGGCAAGGAGGT
TGAAGACGACGATGAAGACGATGTTGATATGGATGACGAGGACGAATGGC
TCAGTGATGACTTCGAAGATGACAATGCGGAGGAGCAAGAGAACGATGAT
GAGGATGAGGATGAGGTTGAGGACGAGGACGAATCGATGGAGGAGTAAAC
AGCCGCACCTTCATCACCTTGAACCGGATGCTTAATGTCAAGCAGCTCAT
AGCCCAGCTGCTACATCAACATTCCACTGCATTACTTGCTTCGGACATTG
ACCCTGAGAACTGGGCACATGCCTGCGAGGCTGTGATGGTGGAGACCAGT
TACATTTCACTGTGACGAAGCCTGCGATGGTGAACGTGACTCTTTGTGCC
CTTTGCCGTTGGCATTGGGAGTAGGTGGCCACGGACGAGACGGACTGAGA
TATATAAGAGCCTCGATCAGAATGCTGCGAGCCATGACCGGAAGTCTCTC
GTGACGTTCAGCAGGCTGGCCATGACCGATAGAAGTACCAAAATATACCC
ACAATCCTGCCTATTCCTTATACTCGTACATGGAAG
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Coding sequence (CDS) from alignment at KZ851901.1:283627..285512+

>M747DRAFT_292313-T1 ID=M747DRAFT_292313-T1|Name=M747DRAFT_292313-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2742bp|location=Sequence derived from alignment at KZ851901.1:283627..285512+ (Aspergillus niger ATCC 13496)
ATGGCGAAGGCACGTACTAAGAAGCGCACTCATGTTCGCGCGCAAAATGC
CACGGCTGCTGCTGCCAAAGGCGGCGCCGCATCTATGAGCAAGACTCCGA
AGTCGATGGTTATCCGCGTCGGCGCTTCAGAAGTCGGTGCTAGTGTGAGC
CAGTTGGTCAAAGATGTGCGAACGATGATGGAGCCGGATACGGCTGTGAG
ATTGAAGGAACGCAAATCAAACAGACTAAGGGATTACACGACTATGACTG
GTCCCCTTGGAGTCACACATCTTATGCTTTTCTCCAAGTCGGCGACTGGA
AACACGAATATGCGTTTGGCGCTTACGCCCCGGGGTCCGACTTTGCACTT
CCAGGTGGAAAACTACTCCCTATGCCGTGATGTTGAGAAAGCTTTGAAGC
GCCCGAGAGGTGGTGGTCAGGATCACAAGACGCCTCCTTTGCTGGTCATG
AACAACTTCAACTCTCCCAACGCCACTGAGGACTCTAAGGTACCTAAGCG
TCTGGAGAGTCTCTCAACGACCATCTTCCAATCTCTCTTCCCCCCGATCA
ACCCTCAAGCCACTCCCCTCTCCTCCATTCGCCGTGTAATGCTCTTGAAC
CGTGAACTCGCCCCCGAGGGTGAGGAAGAAGAACACTATGTGTTGAACCT
CCGTCATTACGCCATTACTACGAAGAAGACCGGTGTTTCGAAACGCATTC
GCCGTCTTGATCCCAAGGAAATCCGGAACAGGGAGAAGAAGGGAGCTGCT
GTGCCCAACCTGGGTAAGCTGGAGGATGCGGCGGATTATCTGCTGGATCC
GTCGGCTGCTGGGTATACCTCGGCCAGTGAAACGGAAATGGACACGGATG
CTGAAGTTGAGGTGGCGGAGAGCACCACGAAGAAGGTTCTCTCGAAGCGT
GAACTGCAGCGCATGAAGGCTGGAGAGAAGGAGAAGGCACAGAAGAAGCT
GAGCAATGCTCCAGGAGTCGAGAAGCGGGCGGTCAAGTTGGTTGAGCTGG
GCCCTCGTATGAAGCTTCGCTTGCTTAAGGTTGAAGAAGGCCTCTGCGAA
GGTCGCGTGATGTGGCACGATTTCATCAAGAAGTCTGAGGATGAAGTCAC
CAAATTGGACAAGAACTGGGACCAGAAGAAGAAGGAGAAGGAGCAAAGAA
AGAAGGAACAAAAGGCAAACATTGAGAAGAAGAAGCAAGCCAAGGCTCAA
GCTAAAGCCGAAGGCAAGGAGGTTGAAGACGACGATGAAGACGATGTTGA
TATGGATGACGAGGACGAATGGCTCAGTGATGACTTCGAAGATGACAATG
CGGAGGAGCAAGAGAACGATGATGAGGATGAGGATGAGGTTGAGGACGAG
GACGAATCGATGGAGGAGTAAATGGCGAAGGCACGTACTAAGAAGCGCAC
TCATGTTCGCGCGCAAAATGCCACGGCTGCTGCTGCCAAAGGCGGCGCCG
CATCTATGAGCAAGACTCCGAAGTCGATGGTTATCCGCGTCGGCGCTTCA
GAAGTCGGTGCTAGTGTGAGCCAGTTGGTCAAAGATGTGCGAACGATGAT
GGAGCCGGATACGGCTGTGAGATTGAAGGAACGCAAATCAAACAGACTAA
GGGATTACACGACTATGACTGGTCCCCTTGGAGTCACACATCTTATGCTT
TTCTCCAAGTCGGCGACTGGAAACACGAATATGCGTTTGGCGCTTACGCC
CCGGGGTCCGACTTTGCACTTCCAGGTGGAAAACTACTCCCTATGCCGTG
ATGTTGAGAAAGCTTTGAAGCGCCCGAGAGGTGGTGGTCAGGATCACAAG
ACGCCTCCTTTGCTGGTCATGAACAACTTCAACTCTCCCAACGCCACTGA
GGACTCTAAGGTACCTAAGCGTCTGGAGAGTCTCTCAACGACCATCTTCC
AATCTCTCTTCCCCCCGATCAACCCTCAAGCCACTCCCCTCTCCTCCATT
CGCCGTGTAATGCTCTTGAACCGTGAACTCGCCCCCGAGGGTGAGGAAGA
AGAACACTATGTGTTGAACCTCCGTCATTACGCCATTACTACGAAGAAGA
CCGGTGTTTCGAAACGCATTCGCCGTCTTGATCCCAAGGAAATCCGGAAC
AGGGAGAAGAAGGGAGCTGCTGTGCCCAACCTGGGTAAGCTGGAGGATGC
GGCGGATTATCTGCTGGATCCGTCGGCTGCTGGGTATACCTCGGCCAGTG
AAACGGAAATGGACACGGATGCTGAAGTTGAGGTGGCGGAGAGCACCACG
AAGAAGGTTCTCTCGAAGCGTGAACTGCAGCGCATGAAGGCTGGAGAGAA
GGAGAAGGCACAGAAGAAGCTGAGCAATGCTCCAGGAGTCGAGAAGCGGG
CGGTCAAGTTGGTTGAGCTGGGCCCTCGTATGAAGCTTCGCTTGCTTAAG
GTTGAAGAAGGCCTCTGCGAAGGTCGCGTGATGTGGCACGATTTCATCAA
GAAGTCTGAGGATGAAGTCACCAAATTGGACAAGAACTGGGACCAGAAGA
AGAAGGAGAAGGAGCAAAGAAAGAAGGAACAAAAGGCAAACATTGAGAAG
AAGAAGCAAGCCAAGGCTCAAGCTAAAGCCGAAGGCAAGGAGGTTGAAGA
CGACGATGAAGACGATGTTGATATGGATGACGAGGACGAATGGCTCAGTG
ATGACTTCGAAGATGACAATGCGGAGGAGCAAGAGAACGATGATGAGGAT
GAGGATGAGGTTGAGGACGAGGACGAATCGATGGAGGAGTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_292313M747DRAFT_292313Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292313-T1.utr5p1M747DRAFT_292313-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292313-T1.exon1M747DRAFT_292313-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_292313-T1.exon2M747DRAFT_292313-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292313-T1.cdsM747DRAFT_292313-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292313-T1.utr3p1M747DRAFT_292313-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292313-T1M747DRAFT_292313-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09263NE7
DBxrefInterPro:IPR007109
DBxrefPFAM:PF04427
Productribosome biogenesis protein Ssf2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851901.1supercontigKZ851901.1:283627..285512 +
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