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M747DRAFT_292348-T1, M747DRAFT_292348-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_292348-T1
Unique NameM747DRAFT_292348-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851901.1:409272..410773-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_292348-T1 ID=M747DRAFT_292348-T1|Name=M747DRAFT_292348-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1502bp|location=Sequence derived from alignment at KZ851901.1:409272..410773- (Aspergillus niger ATCC 13496)
GTCACATTCATTCTTCGTCTTCCTCCCACAACCCCCCCTGCAGCTTATTC
CCTTGTACTGGTAACTCAGAACCAGCGCAACACCGCCATCCCGGCTCATT
GTCTGACCGCCGACGCGCTCCTTCATTCACTATTGGACTAGTTCTGGCCG
GCCCTCCCTTGCTCGCCAGCCACCAACCACCAGTCACCACTACCACCACT
CACCTTCATTCACTATTAACACTACCACCATGGCCGACTCATCGGCTTCG
CAACCTCCCCCTCCAGCTGCTGCCCCTGCTTCCGCCTCGGCTCCAGCTCC
AGCTCCAGCTCCTCCAGCATCGCAAGATTCCTCCTCCGCGACTGTCGTCC
CCAAACAAGAACCAGATACCGCTGACAACACCCTGGATGCGTCTATCGAA
CAAGACGTCGACATAAACACAAACAACACCGCCAACATGCCGAACCAGAA
TCCCGCTGGCGATGACGCCGCCGCCGCCGCCGGAAACTCCATCCCCGCGC
CCACCTCCGTGGATGCTCTGGCGGCCGCCGCAGCACCTGCCAAGAAAGAA
ACCAGCTTGCGGGAGTTCATGGGCAAGATGGACGAATATGCGCCGATTGT
AAGATTCCTTGCCCTCTCCAGCTGGATTCCATCTTATATCACTTTTTCTC
TCCACTACCACCCTCAGTTACTTCCACCCCATATTTCTATTCCATGTCTT
TCTAACACGGATATCTTTAGATCCCCGACGCCGTCACAGCCCACTATCTC
ACTCTTGCCGGTCTTCCACCTCCGGGTAACGGCCCCAACCAAACACCGCC
TCACCTCGCCCGTCTTCTCGCTCTCGCAACCCAGAAATTTATCGCCGACA
TCGCTGCCGACTCGTACCAGTACGCGCGCATTCGCGCCTCCAACAGCTCC
TCTGCCAGTAACCCCATGGGCAGTTTGAACGCCGCCTCAGGCTTGAACAT
GCCCGCCGGCGCTGCGGGTGTGGGGTCCGCCGGTGCTGCGACCGGAGTAT
CAGGCGGCGATGCAGGAAAGGGCAAAGCGGGCACCCATCTCGGAATCCAG
AGACCCGGGTTTGGAGGTGGCGGTTCTGGAGGTTCCGGACAGGGACGGAC
GGTGCTTACGATGGAGGACTTGGGTATGGCGGTGTCGGAGTACGGTGTCA
GTGTTAAGAGGGGGGAGTTCTATCGGTGATTTTCTTCCCTTTTCCACCTT
GGGTATGCTTGGGGGGTTGGTTGTTCGTTGCAAACATGCTGAATGTTTAT
GGGCATGGGCATGGGGATATGGGTAGATCGGGGACGGGATGGGATGTGCT
GTTTTACTTACTTTTTCTTTCTCCTTTGCTTGCTGGCGTAAAATACTGGG
CAACGGCCGAACGATATCCTGCATGTGGGCCGAGTTTGAAATATACAAAA
GGCGTTCAGGGCGGAGTTATCAGATACGATATGGTAGGAAGGGCGGCACA
CGCAAAAAAAAAGGAAGACAATAACTAAGAGAATAATAGAAGCGACTTGA
TG
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Coding sequence (CDS) from alignment at KZ851901.1:409272..410773-

>M747DRAFT_292348-T1 ID=M747DRAFT_292348-T1|Name=M747DRAFT_292348-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1656bp|location=Sequence derived from alignment at KZ851901.1:409272..410773- (Aspergillus niger ATCC 13496)
ATCCCCGACGCCGTCACAGCCCACTATCTCACTCTTGCCGGTCTTCCACC
TCCGGGTAACGGCCCCAACCAAACACCGCCTCACCTCGCCCGTCTTCTCG
CTCTCGCAACCCAGAAATTTATCGCCGACATCGCTGCCGACTCGTACCAG
TACGCGCGCATTCGCGCCTCCAACAGCTCCTCTGCCAGTAACCCCATGGG
CAGTTTGAACGCCGCCTCAGGCTTGAACATGCCCGCCGGCGCTGCGGGTG
TGGGGTCCGCCGGTGCTGCGACCGGAGTATCAGGCGGCGATGCAGGAAAG
GGCAAAGCGGGCACCCATCTCGGAATCCAGAGACCCGGGTTTGGAGGTGG
CGGTTCTGGAGGTTCCGGACAGGGACGGACGGTGCTTACGATGGAGGACT
TGGGTATGGCGGTGTCGGAGTACGGTGTCAGTGTTAAGAGGGGGGAGTTC
TATCGGTGAATGGCCGACTCATCGGCTTCGCAACCTCCCCCTCCAGCTGC
TGCCCCTGCTTCCGCCTCGGCTCCAGCTCCAGCTCCAGCTCCTCCAGCAT
CGCAAGATTCCTCCTCCGCGACTGTCGTCCCCAAACAAGAACCAGATACC
GCTGACAACACCCTGGATGCGTCTATCGAACAAGACGTCGACATAAACAC
AAACAACACCGCCAACATGCCGAACCAGAATCCCGCTGGCGATGACGCCG
CCGCCGCCGCCGGAAACTCCATCCCCGCGCCCACCTCCGTGGATGCTCTG
GCGGCCGCCGCAGCACCTGCCAAGAAAGAAACCAGCTTGCGGGAGTTCAT
GGGCAAGATGGACGAATATGCGCCGATTATCCCCGACGCCGTCACAGCCC
ACTATCTCACTCTTGCCGGTCTTCCACCTCCGGGTAACGGCCCCAACCAA
ACACCGCCTCACCTCGCCCGTCTTCTCGCTCTCGCAACCCAGAAATTTAT
CGCCGACATCGCTGCCGACTCGTACCAGTACGCGCGCATTCGCGCCTCCA
ACAGCTCCTCTGCCAGTAACCCCATGGGCAGTTTGAACGCCGCCTCAGGC
TTGAACATGCCCGCCGGCGCTGCGGGTGTGGGGTCCGCCGGTGCTGCGAC
CGGAGTATCAGGCGGCGATGCAGGAAAGGGCAAAGCGGGCACCCATCTCG
GAATCCAGAGACCCGGGTTTGGAGGTGGCGGTTCTGGAGGTTCCGGACAG
GGACGGACGGTGCTTACGATGGAGGACTTGGGTATGGCGGTGTCGGAGTA
CGGTGTCAGTGTTAAGAGGGGGGAGTTCTATCGGTGAATGGCCGACTCAT
CGGCTTCGCAACCTCCCCCTCCAGCTGCTGCCCCTGCTTCCGCCTCGGCT
CCAGCTCCAGCTCCAGCTCCTCCAGCATCGCAAGATTCCTCCTCCGCGAC
TGTCGTCCCCAAACAAGAACCAGATACCGCTGACAACACCCTGGATGCGT
CTATCGAACAAGACGTCGACATAAACACAAACAACACCGCCAACATGCCG
AACCAGAATCCCGCTGGCGATGACGCCGCCGCCGCCGCCGGAAACTCCAT
CCCCGCGCCCACCTCCGTGGATGCTCTGGCGGCCGCCGCAGCACCTGCCA
AGAAAGAAACCAGCTTGCGGGAGTTCATGGGCAAGATGGACGAATATGCG
CCGATT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006352DNA-templated transcription, initiation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_292348M747DRAFT_292348Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292348-T1M747DRAFT_292348-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292348-T1.cdsM747DRAFT_292348-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292348-T1.utr3p1M747DRAFT_292348-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292348-T1.exon2M747DRAFT_292348-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_292348-T1.exon1M747DRAFT_292348-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292348-T1.utr5p1M747DRAFT_292348-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR003923
DBxrefPFAM:PF03540
Product TAF10 subunit
Producttranscription initiation factor IID
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851901.1supercontigKZ851901.1:409272..410773 -
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