You are here

Home

M747DRAFT_292482-T1, M747DRAFT_292482-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_292482-T1
Unique NameM747DRAFT_292482-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851901.1:807670..808696+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_292482-T1 ID=M747DRAFT_292482-T1|Name=M747DRAFT_292482-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1027bp|location=Sequence derived from alignment at KZ851901.1:807670..808696+ (Aspergillus niger ATCC 13496)
ATCTTCCCTCCGAATATCACAACCCTCCCTCCCCGTCACCACTTTCCACA
CCTTAATCGGACACATTCAATTAACCCAAAATGGTCCGACGATTCTCCAA
GTTCCCCAAAAAGCCCGCCGACTGGGTCGGCCCCGCGGCGCCTCTCTCCC
AACGGAAGCAGATCTTCCTGTACGCCATCCTATACTTTCCATACCAAACC
TTTTTCTATTCATTCCCCTACCAATAACAAGTACCAGATGACTGACAATC
TGAAATAACTGATATAGTCCCGACTTCACAATCGCCCTAATCCGCACGCC
CTTCCTTCCCCCCCGCTACGCCACCTTCTACGTGCCGCTCAACTTCAACA
AACTGGATATGCGCGATTACCTGCAGCGTCTGTACGGCGTGGGCGTCGTC
AGCGTGCGCTCATTCGTCGAACAGCAGAAACTGACGAGGTTGAAGTCCCT
GGGTCGCTATGGATATGGAAAGATCCGTCGCCCGCAGTCTAAGAAGAAGA
TGACGGTCGAGATGAAGGAGGCATTTGTTTGGCCCGAGGCGCCGACGGAT
ATGGCTCCGTATGTTACCCTCTCTATGTATCTGTTTGATATTGTTGTTGT
TGTCATTGTTGTTGAAGGATTGGTGGGTTGTGGAAACAATGCTGACTATA
TGGGTGTTTGTGTGCAGATGGGAGAAGGACCAGTTCTTCAAGGCTCAGAA
ATACCAGGAGGAGATCCAGGATAAGCAGAAGCCGGATGCGGGGATGAAGG
CGGATGAGAAGGAGAGGGAGGTCTATAAGGAGGATGCGAAGAAGTTGTTG
GAGGGTGCTAAGCCGTGGAGGCCGACTTGGAAGGCTTTGGGGTTGGGGCA
TTATGAGAGGCCGTTGGTTAAGTCGTGATTTTCTCTTTCTCGTTGATATG
CTGGTTTAGAAATTGTTTGTTTGGTATATCATTTGTTGGCTGGGTTTAGA
CAGTTTGTGATTGATGCTGTCGTCGTGTATTATATTATATTACCTACTTT
GTGTTCAATACTATCATTGTGTCTGGG
back to top

Coding sequence (CDS) from alignment at KZ851901.1:807670..808696+

>M747DRAFT_292482-T1 ID=M747DRAFT_292482-T1|Name=M747DRAFT_292482-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1773bp|location=Sequence derived from alignment at KZ851901.1:807670..808696+ (Aspergillus niger ATCC 13496)
ATGGTCCGACGATTCTCCAAGTTCCCCAAAAAGCCCGCCGACTGGGTCGG
CCCCGCGGCGCCTCTCTCCCAACGGAAGCAGATCTTCCTTCCCGACTTCA
CAATCGCCCTAATCCGCACGCCCTTCCTTCCCCCCCGCTACGCCACCTTC
TACGTGCCGCTCAACTTCAACAAACTGGATATGCGCGATTACCTGCAGCG
TCTGTACGGCGTGGGCGTCGTCAGCGTGCGCTCATTCGTCGAACAGCAGA
AACTGACGAGGTTGAAGTCCCTGGGTCGCTATGGATATGGAAAGATCCGT
CGCCCGCAGTCTAAGAAGAAGATGACGGTCGAGATGAAGGAGGCATTTGT
TTGGCCCGAGGCGCCGACGGATATGGCTCCATGGGAGAAGGACCAGTTCT
TCAAGGCTCAGAAATACCAGGAGGAGATCCAGGATAAGCAGAAGCCGGAT
GCGGGGATGAAGGCGGATGAGAAGGAGAGGGAGGTCTATAAGGAGGATGC
GAAGAAGTTGTTGGAGGGTGCTAAGCCGTGGAGGCCGACTTGGAAGGCTT
TGGGGTTGGGGCATTATGAGAGGCCGTTGGTTAAGTCGTGAATGGTCCGA
CGATTCTCCAAGTTCCCCAAAAAGCCCGCCGACTGGGTCGGCCCCGCGGC
GCCTCTCTCCCAACGGAAGCAGATCTTCCTTCCCGACTTCACAATCGCCC
TAATCCGCACGCCCTTCCTTCCCCCCCGCTACGCCACCTTCTACGTGCCG
CTCAACTTCAACAAACTGGATATGCGCGATTACCTGCAGCGTCTGTACGG
CGTGGGCGTCGTCAGCGTGCGCTCATTCGTCGAACAGCAGAAACTGACGA
GGTTGAAGTCCCTGGGTCGCTATGGATATGGAAAGATCCGTCGCCCGCAG
TCTAAGAAGAAGATGACGGTCGAGATGAAGGAGGCATTTGTTTGGCCCGA
GGCGCCGACGGATATGGCTCCATGGGAGAAGGACCAGTTCTTCAAGGCTC
AGAAATACCAGGAGGAGATCCAGGATAAGCAGAAGCCGGATGCGGGGATG
AAGGCGGATGAGAAGGAGAGGGAGGTCTATAAGGAGGATGCGAAGAAGTT
GTTGGAGGGTGCTAAGCCGTGGAGGCCGACTTGGAAGGCTTTGGGGTTGG
GGCATTATGAGAGGCCGTTGGTTAAGTCGTGAATGGTCCGACGATTCTCC
AAGTTCCCCAAAAAGCCCGCCGACTGGGTCGGCCCCGCGGCGCCTCTCTC
CCAACGGAAGCAGATCTTCCTTCCCGACTTCACAATCGCCCTAATCCGCA
CGCCCTTCCTTCCCCCCCGCTACGCCACCTTCTACGTGCCGCTCAACTTC
AACAAACTGGATATGCGCGATTACCTGCAGCGTCTGTACGGCGTGGGCGT
CGTCAGCGTGCGCTCATTCGTCGAACAGCAGAAACTGACGAGGTTGAAGT
CCCTGGGTCGCTATGGATATGGAAAGATCCGTCGCCCGCAGTCTAAGAAG
AAGATGACGGTCGAGATGAAGGAGGCATTTGTTTGGCCCGAGGCGCCGAC
GGATATGGCTCCATGGGAGAAGGACCAGTTCTTCAAGGCTCAGAAATACC
AGGAGGAGATCCAGGATAAGCAGAAGCCGGATGCGGGGATGAAGGCGGAT
GAGAAGGAGAGGGAGGTCTATAAGGAGGATGCGAAGAAGTTGTTGGAGGG
TGCTAAGCCGTGGAGGCCGACTTGGAAGGCTTTGGGGTTGGGGCATTATG
AGAGGCCGTTGGTTAAGTCGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_292482M747DRAFT_292482Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292482-T1M747DRAFT_292482-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292482-T1.utr5p1M747DRAFT_292482-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292482-T1.exon1M747DRAFT_292482-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_292482-T1.exon2M747DRAFT_292482-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_292482-T1.exon3M747DRAFT_292482-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292482-T1.cdsM747DRAFT_292482-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292482-T1.utr3p1M747DRAFT_292482-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264HX6
DBxrefInterPro:IPR012678
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR013025
DBxrefPFAM:PF00276
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851901.1supercontigKZ851901.1:807670..808696 +
Powered by Drupal